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Affymetrix Learning Center - Online Training LEARNING CENTER
Learning Center, Train on Affymetrix Tools and Instruments Learning Center Overview
Learning Center, Command Console Software Series Command Console®
Learning Center, Newark NJ - Data Analysis Workshops Data Analysis Workshops
Learning Center, Genotyping Console Software Series Genotyping Console™ 2.1
Learning Center, Genotyping Console Software Series Genotyping Console™
Learning Center, Genotyping Console Software Series NetAffx® Learning Center
Learning Center, GTYPE 4.1 Software Overview Mapping 500k Assay
Learning Center, GTYPE 4.1 Software Overview WT Assay Tutorial
Tiling Analysis Software Tutorial Tiling Analysis Software Tutorial
Learning Center, Expression Data Analysis Series Expression Data
Analysis Series
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White Papers
GENECHIP ARRAYS
Alternative Transcript Analysis Methods for Exon Arrays v1.1 (pdf, 79 KB)
BRLMM Algorithm for Affymetrix Mapping Arrays (pdf, 278 KB)
BRLMM-P: a Genotype Calling Method for the SNP 5.0 Array (pdf, 163 KB)
Drosophila Tiling 2.0R Array Design and Library files (pdf, 59 KB)
Exon Array Background Correction v1.0 (pdf, 78 KB)
Exon Probeset Annotations and Transcript Cluster Groupings v1.0 (pdf, 87 KB)
Exon Related Changes FAQ (pdf, 268 KB)
Gene Signal Estimates from Exon Arrays v1.0 (pdf, 428 KB)
HT and Cartridge IVT Expression Arrays (pdf, 601 KB)
Human Gene 1.0 ST Array Performance (pdf, 620 KB)
Microarray Platform Comparisons - Commentary (pdf, 492 KB)
Performance Evaluation of the GeneChip® HT Array Plate Scanner (pdf, 1.96MB)
Quality Assessment of Exon and Gene Arrays (pdf, 180 KB)
Targeted Genotyping Algorithm Enhancements for Release 1.5 (pdf, 21 KB)
Whole Transcript (WT) Sense Target Labeling Assay Performance (pdf, 801 KB)
REAGENTS
Targeted Genotyping Algorithm Enhancements for Release 1.5 (pdf, 21 KB)
INSTRUMENTS
HT and Cartridge IVT Expression Arrays (pdf, 601 KB)
Performance Evaluation of the GeneChip® HT Array Plate Scanner (pdf, 1.96MB)
Targeted Genotyping Algorithm Enhancements for Release 1.5 (pdf, 21 KB)
SOFTWARE
Alternative Transcript Analysis Methods for Exon Arrays v1.1 (pdf, 79 KB)
BRLMM Algorithm for Affymetrix Mapping Arrays (pdf, 278 KB)
BRLMM-P: a Genotype Calling Method for the SNP 5.0 Array (pdf, 163 KB)
Copy Number and Loss of Heterozygosity Estimation Algorithms for the GeneChip® Human Mapping Array Sets (pdf, 2.94 MB)
Exon Array Background Correction v1.0 (pdf, 78 KB)
Exon Probeset Annotations and Transcript Cluster Groupings v1.0 (pdf, 87 KB)
Exon Related Changes FAQ (pdf, 268 KB)
Gene Signal Estimates from Exon Arrays v1.0 (pdf, 428 KB)
Genotyping Console™ Quality Control Assessment (pdf, 1.07 MB)
IVT Annotation Generation in NetAffx (pdf, 66k)
Improved Gridding Algorithms in AGCC Produce Equivalent Biological Results (pdf, 82 KB)
Investigating Data With NetAffx (pdf, 941k)
MAPD and Quality Control in GTC 2.0 (pdf, 193 KB)
Negligible Data Impact Due to Ecoli and Ecoli_ASv2 Library File Change (pdf, 38 KB)
Statistical Algorithms Description Document (pdf, 216 KB)
Targeted Genotyping Algorithm Enhancements for Release 1.5 (pdf, 21 KB)
The Loss of Heterozygosity (LOH) Algorithm in Genotyping Console 2.0 (pdf, 165 KB)
TECHNICAL SUPPORT
  United States / Canada
888-DNA-CHIP
(888-362-2447)
e-mail technical support
  Europe
+44 (0) 1628 552550
e-mail technical support
  Japan
+81 3-5730-8222
e-mail technical support
POPULAR DOWNLOADS
Brochure, The GeneChip® System: An Integrated Solution For Expression and DNA Analysis (pdf, 227 KB)
Brochure, RNA Expression Analysis with the GeneChip® System (pdf, 1.3 MB)
Data Sheet, Human Genome Arrays (pdf, 169 KB)
Manual, Expression Analysis Technical Manual
Manual, Data Analysis Fundamentals (pdf, 723 KB)
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