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A technical note is a document that provides additional technical details on a technology, product or application.

Arrays

• An Analysis of Blood Processing Methods to Prepare Samples for GeneChip® Expression Profiling (pdf, 295 KB)
• Annotation Methodology
• Array Design and Performance of the GeneChip® Mouse Expression Set 430 (pdf, 575 KB)
• Array Design and Performance of the GeneChip® Rat Expression Set 230 (pdf, 554 KB)
• Array Design for the Human Exon 1.0 ST Array (pdf, 348 KB)
• Array Design for the Human Genome U133 Set (pdf, 18 MB)
• Arrays Provide Optimal Sensitivity and Specificity for Microarray Expression Analysis (pdf, 2.26 MB)
• Associating Copy Number and SNP Variation with Human Disease (pdf, 1.63 MB)
• CustomSeq® Resequencing Array Base Calling Algorithm Version 2.0 (pdf, 213 KB)
• Design and Performance of the GeneChip® Human Genome U133 Plus 2.0 and Human Genome U133A 2.0 Array (pdf, 207 KB)
• Gene 1.0 ST Array Design (pdf, 324 KB)
• GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)
• Globin Reduction Protocol: A Method for Processing Whole Blood RNA Samples for Improved Array Results (pdf, 522 KB)
• Guide to Probe Logarithmic Intensity Error (PLIER) Estimation (pdf, 294 KB)
• Human Exon 1.0 ST Array and WT Sense Target Labeling Assay for Genome-Wide, Exon-Level Expression Analysis (pdf, 624 KB)
• Identifying and Validating Alternative Splicing Events (pdf, 844 KB)
• Linking Whole-genome Amplification to SNP Genotyping (pdf, 346 KB)
• Manufacturing Quality Control and Validation Studies of GeneChip® Arrays (pdf, 3.28 MB)
• Performance and Validation of GeneChip® HT Human, Mouse and Rat PM Array Plates (pdf, 678 KB)
• Performance and Validation of the Human Genome U133 Set (pdf, 42 MB)
• SNP Concordance Across Affymetrix Genotyping Arrays (pdf, 168 KB)
• Sample Pooling for Microarray Analysis: A Statistical Assessment of Risks and Biases (pdf, 106 KB)
• Use of Saliva gDNA for SNP Genotyping (pdf, 556 KB)

Reagents & Assays

• 3' IVT Express and One-Cycle Comparison (pdf, 245 KB)
• An Analysis of Blood Processing Methods to Prepare Samples for GeneChip® Expression Profiling (pdf, 295 KB)
• Array Design for the Human Exon 1.0 ST Array (pdf, 348 KB)
• Human Exon 1.0 ST Array and WT Sense Target Labeling Assay for Genome-Wide, Exon-Level Expression Analysis (pdf, 624 KB)
• Identifying and Validating Alternative Splicing Events (pdf, 844 KB)
• Increased Enzyme Concentration for the GeneChip® WT cDNA Synthesis and Amplification Kit (pdf, 449 KB)
• Product Bulletin: Ambion® WT Expression Kit (pdf, 1.24 MB)
• SNP Concordance Across Affymetrix Genotyping Arrays (pdf, 168 KB)
• The New GeneChip® IVT Labeling Kit: Optimized Protocol for Improved Results (pdf, 235 KB)

Instruments

• Analysis of Temperature Performance in the GeneChip® Hybridization Oven 645 (pdf 347 KB)
• Associating Copy Number and SNP Variation with Human Disease (pdf, 1.63 MB)
• Performance Evaluation of the GeneChip® Fluidics Station 450 (pdf, 132 KB)
• Performance Review of the GeneChip® AutoLoader for the Affymetrix GeneChip® Scanner 3000 (pdf, 1.6 MB)
• Performance and Validation of GeneChip® HT Human, Mouse and Rat PM Array Plates (pdf, 678 KB)
• Scanner 3000: New Advances in Scanner Design (pdf, 192 KB)
• Seamless Performance Between GeneChip® Scanner 3000 and GeneArray® 2500 Scanner (pdf, 4.64 MB)

Software

• Annotation Methodology
• Guide to Probe Logarithmic Intensity Error (PLIER) Estimation (pdf, 294 KB)
• Human Exon 1.0 ST Array and WT Sense Target Labeling Assay for Genome-Wide, Exon-Level Expression Analysis (pdf, 624 KB)
• Installation Verification, AGCC with GTGS 1.6 (pdf, 158 KB)
• Installation Verification, GCOS with GTGS 1.6 (pdf, 158 KB)
• Microsoft Windows Authentication (pdf, 127 KB)
• Microsoft Windows XP SP2 and Firewall Settings for the TG System (pdf, 568 KB)
• Symantec Norton AntiVirus Configuration for the TG System (pdf, 614 KB)

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