Manuals
A manual is a technical document intended to give step-by-step instructions and general guidance to customers working with a particular product/application.
Arrays
- 100K Mapping Assay Manual (pdf, 1.2 MB)
- 10K 2.0 Mapping Assay Manual (pdf, 1.2 MB)
- 3' IVT Express Kit User Manual (pdf, 1.17 MB)
- Affymetrix® Human SNP Assay 6.0 User Guide for Automated Target Preparation (pdf, 2.62 MB)
- Alignment Data in PSL Format
- Ambion® WT Expression Kit (pdf, 1.14 MB)
- Axiom™ Genome-Wide Human Assay, Site Prep Guide (pdf, 415 KB)
- Axiom™ myDesign™ Array Design Guide
- BRLMM - Apt-Probeset-Genotype (pdf, 223 KB)
- ChIP-on-chip Experimental Design Quick Start Guide (pdf, 1.31 MB)
- Chromatin Immunoprecipitation Assay Protocol (pdf, 679 KB)
- CustomSeq® Resequencing Array Design Guide (pdf, 329 KB)
- CustomSeq® Resequencing Array Protocol (pdf, 716 KB)
- Cytogenetics Assay Protocol (pdf, 2.13 MB)
- Cytogenetics Copy Number Assay Site Preparation Guide (pdf, 190 KB)
- Cytogenetics Copy Number Assay User Guide (pdf, 2.6 MB)
- DMET™ Console Software User Guide (3.48 MB, 11/9)
- DMET™ Plus Premier Pack User Guide (including protocol) (1.65 MB, 11/9)
- DMET™ Plus Site Preparation Guide (132 KB, 11/9)
- DMET™ Plus Starter Pack User Guide (including protocol) (1.75 MB, 11/9)
- Expression Analysis Technical Manual For HT Array Plates Using the GeneChip® Array Station (pdf, 7.4 MB)
- Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)
- GeneAtlas™ 3' IVT Express Kit (pdf, 1.25 MB)
- Genome-Wide Human SNP Nsp/Sty 6.0 User Guide (pdf, 2.97 MB)
- Genome-Wide Human SNP Nsp/Sty Assay 5.0 (pdf, 2.46 MB)
- HT 3' IVT Express Kit (pdf 8.41 MB)
- Mapping 500K Assay Manual (pdf, 3.4 MB)
- Probe Set Data in MAGE-ML Format
- ToxFX™ Analysis Suite Manual (pdf, 1.0 MB)
- WT Terminal Labeling and Hybridization User Manual (pdf, 536 KB)
- Whole Transcript (WT) Double-Stranded Target Assay (pdf, 751 KB)
- Whole Transcript (WT) Sense Target Labeling Assay (pdf, 1.18 MB)
Reagents & Assays
- 100K Mapping Assay Manual (pdf, 1.2 MB)
- 3' IVT Express Kit User Manual (pdf, 1.17 MB)
- Affymetrix® Human SNP Assay 6.0 User Guide for Automated Target Preparation (pdf, 2.62 MB)
- Ambion® WT Expression Kit (pdf, 1.14 MB)
- Cytogenetics Assay Protocol (pdf, 2.13 MB)
- Expression Analysis Technical Manual - Cartridge Arrays Using the Array Station (pdf, 1.70 MB)
- Expression Analysis Technical Manual For HT Array Plates Using the GeneChip® Array Station (pdf, 7.4 MB)
- Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)
- Expression Wash, Stain and Scan User Manual for Cartridge Arrays (pdf, 5.41 MB)
- GeneAtlas™ 3' IVT Express Kit (pdf, 1.25 MB)
- Genome-Wide Human SNP Nsp/Sty 6.0 User Guide (pdf, 2.97 MB)
- Genome-Wide Human SNP Nsp/Sty Assay 5.0 (pdf, 2.46 MB)
- Globin-Reduction Protocol (pdf, 495 KB)
- HT 3' IVT Express Kit (pdf 8.41 MB)
- Mapping 500K Assay Manual (pdf, 3.4 MB)
- Probe Set Data in MAGE-ML Format
- Site Prep Guide, HT 3' IVT Express on Biomek FXP Target Prep Express (pdf, 411 KB)
- Targeted Genotyping Analysis (GTGS) User's Guide, includes TG protocol (pdf, 1.9 MB)
- Targeted Genotyping System Site Preparation Guide (pdf, 892 KB)
- Targeted Genotyping System User's Guide (pdf, 4.04 MB)
- User Guide, HT 3' IVT Express on Biomek FXP Target Prep Express
- WT Terminal Labeling and Hybridization User Manual (pdf, 536 KB)
- WT Terminal Labeling and Hybridization for use with the Ambion® WT Expression Kit (pdf, 451 KB)
- Whole Transcript (WT) Double-Stranded Target Assay (pdf, 751 KB)
- Whole Transcript (WT) Sense Target Labeling Assay (pdf, 1.18 MB)
Instruments
- Affymetrix® Human SNP Assay 6.0 User Guide for Automated Target Preparation (pdf, 2.62 MB)
- Array Station User's Guide (pdf, 2.77 MB)
- Array Station, Site Preparation Guide (pdf, 352 KB)
- Command Console® Software (AGCC) 3.0.1 User's Guide (pdf, 18.9 MB)
- Expression Analysis Technical Manual - Cartridge Arrays Using the Array Station (pdf, 1.70 MB)
- Expression Analysis Technical Manual For HT Array Plates Using the GeneChip® Array Station (pdf, 7.4 MB)
- Fluidics Station 450 Manual (zip, 3.7 MB)
- GeneAtlas™ System Setup Verification Manual (pdf 15.7 MB)
- GeneAtlas™ System Site Preperation Guide (pdf 420 KB)
- GeneAtlas™ System, User's Guide (pdf, 20.7 MB)
- GeneChip QC Toolbox Manual (pdf, 898 KB)
- GeneChip® Fluidics Station 450 for AGCC (pdf, 2.23 MB)
- GeneTitan™ Instrument, User Guide (pdf, 2.02 MB)
- GeneTitan™ Multi-Channel Instrument, User's Guide (pdf, 3.23 MB)
- Hybridization Oven 645 User's Guide (pdf, 446 KB)
- Hybridization Oven Manual (pdf, 128 KB)
- Site Prep Guide, HT 3' IVT Express on Biomek FXP Target Prep Express (pdf, 411 KB)
- Targeted Genotyping System User's Guide (pdf, 4.04 MB)
- User Guide, HT 3' IVT Express on Biomek FXP Target Prep Express
Software
- BRLMM - SNP 5 - Probeset-Genotype (pdf, 218 KB)
- BRLMM-P - SNP 5 - Geno-QC (pdf, 30 KB)
- Command Console® Software (AGCC) 3.0.1 User's Guide (pdf, 18.9 MB)
- Cytogenetics Assay Protocol (pdf, 2.13 MB)
- DMET™ Console Software User Guide (3.48 MB, 11/9)
- Data Analysis Fundamentals (pdf, 1 MB)
- Data Exchange Console 2.0 (pdf, 1.49 MB)
- Data Transfer Tool User Guide (pdf, 966 KB)
- Expression Console™ Software (pdf, 4.1 MB)
- GeneChip® Sequence Analysis Software User's Guide (pdf, 2.4 MB)
- Genome-Wide Human SNP Nsp/Sty 6.0 User Guide (pdf, 2.97 MB)
- Genotyping Console 3.0.1 User Manual, Browser (pdf, 1.34 MB)
- Genotyping Console 4.0 User Manual (pdf, 7.09 MB)
- How to Export Signal Values with Annotation Information (pdf, 95 KB)
- NetAffx - Direct Access To Probe Set Information
- Probe Match Manual (pdf, 50 KB)
- Quick Start Guide for 3' Expression Arrays (pdf, 90 KB)
- Quick Start Guide for Exon Arrays (pdf, 153 KB)
- Quick Start Guide for the Human Gene 1.0 ST Array (pdf, 137 KB)
- Reconnector 2.0 (pdf, 1.3 MB)
- SNP 6.0 Probe Level Access Tool (pdf, 466 KB)
- Targeted Genotyping Analysis (GTGS) User's Guide, includes TG protocol (pdf, 1.9 MB)
- Targeted Genotyping System Site Preparation Guide (pdf, 892 KB)
- Targeted Genotyping System User's Guide (pdf, 4.04 MB)
- Utilizing Data Transfer Tool for Windows XP Service Pack 2 (pdf, 1.4 MB)
- Utilizing GCOS for Windows XP Service Pack 2 (pdf, 1.4 MB)
- Workgroup Addendum, Command Console® Software (AGCC) 3.0 (pdf, 2.04 MB)
