Affymetrix - Direct Access To Probe Set Information


		Direct Access To Probe Set Information

		Link directly to NetAffx™ probe set summaries from within your own applications or websites using a convenient deep link URL.

URL FORMATS

The base URL is https://www.affymetrix.com/LinkServlet. Upon clicking the link, users will be directed to a results page if an active NetAffx session exists. Otherwise, the user will be prompted for a username and password first. Two parameters can be used to specify array and probe information outlined here:

URL Parameter	Description
array	The name for the particular array as represented in the appropriate library file or in the NetAffx Analysis Center. If no array is specified, results from all catalog arrays will be searched. Please review the list of synonyms below for other values available with this parameter.
probeset	The Affymetrix probe set identifier naming either probesets from a 3'IVT, or Genotyping or Exon array. Transcript Cluster IDs from Exon and Gene arrays can also be used to retrieve their respective records. More than one probeset can be queried by separating the identifiers with a comma.

Please Note

Only one kind of array technology can be queried at a time.

If the ID of the probeset you wish to link to contains a "#" character, you must replace that character with "%23". For example, "AF030088UTR#1_at" would look like:
https://www.affymetrix.com/LinkServlet?probeset=AF030088UTR%231_at

Microsoft Product Users

Recent security changes to Microsoft Office products (Word, Excel, etc.) have disabled embedded hyperlinks for direct probeset access. If you wish to access probeset information directly and are using a Microsoft product, please copy and paste the url into your browser's location bar.

EXAMPLES OF DEEP LINKS

Any IVT array having probeset 10156_at	https://www.affymetrix.com/LinkServlet?probeset=10156_at
MG-U74 Array set and probeset 129277_at	https://www.affymetrix.com/LinkServlet?array=U74&probeset=129277_at
Any IVT array with these three probesets	https://www.affymetrix.com/LinkServlet?probeset=1000_at,1002_f_at,38996_at
Rat Exon 1.0 ST probeset 5803325	https://www.affymetrix.com/LinkServlet?array=RaEx-1_0-st-v1&probeset=5803325
Mouse Exon 1.0 ST and Transcript Cluster 6765469	https://www.affymetrix.com/LinkServlet?array=MoEx-1_0-st-v1&probeset=6765469
Human Gene 1.0 ST Transcript Cluster 7925792	https://www.affymetrix.com/LinkServlet?array=HuGene-1_0-st-v1&probeset=7925792
Genome Wide SNP 6.0 SNP_A-1780270 probes	https://www.affymetrix.com/LinkServlet?array=GenomeWideSNP_6&probeset=SNP_A-1780270

VALID ARRAY NAMES TO USE IN QUERIES

The deep link facility expects the array name to be specified as it is represented in the library file. In addition, the following synonyms will work for querying their respective arrays, or array sets:

Tech	Array or Array Set	Parameter
gene	Human Gene 1.0 ST	HuGene-1_0-st-v1
	Mouse Gene 1.0 ST	MoGene-1_0-st-v1
	Rat Gene 1.0 ST	RaGene-1_0-st-v1
exon	Human Exon 1.0 ST	HuEx-1_0-st-v2
	Mouse Exon 1.0 ST	MoEx-1_0-st-v1
	Rat Exon 1.0 ST	RaEx-1_0-st-v1
ivt	AG	ARABIDOPSIS
	ATH1-121501	ARABIDOPSIS_ATH1
	Barley1	BARLEY
	Bovine	Bovine
	Bsubtilis	BSUBTILIS
	Canine	Canine
	Canine_2	Canine_2
	Celegans	C_ELEGANS
	Chicken	Chicken
	Citrus	Citrus
	Cotton	Cotton
	DrosGenome1	DROSOPHILA
	Drosophila_2	Drosophila_2
	Ecoli	ECOLI
	Ecoli_ASv2	ECOLI_ANTISENSE
	E_coli_2	E_coli_2
	HC_G110	HUMAN_CANCER
	HG-Focus	HG_FOCUS
	HG-U133A_2	HG-U133A_2
	HG-U133B, HG-U133A	U133
	HG-U133_Plus_2	U133PLUS
	HG_U95C, HG_U95Av2, HG_U95D, HG_U95E, HG_U95B	U95
	HT_HG-U133A	HT_HG-U133A
	HT_HG-U133B	HT_HG-U133B
	HT_HG-U133_Plus_A	HT_HG-U133_Plus_A
	HT_HG-U133_Plus_B	HT_HG-U133_Plus_B
	HT_MG-430A	HT_MG-430A
	HT_MG-430B	HT_MG-430B
	HT_Rat-Focus	HT_Rat-Focus
	HT_Rat230	HT_Rat230
	Hu35KsubD, Hu35KsubC, Hu35KsubB, Hu35KsubA	U35K
	Hu6800	HUGENEFL
	Maize	Maize
	Medicago	Medicago
	MG_U74Av2, MG_U74Bv2, MG_U74Cv2	U74
	MOE430B, MOE430A	MOE430
	Mouse430A_2	MOUSE430A_2
	Mouse430_2	MOUSE430_2
	Mu11KsubA, Mu11KsubB	MURINE_11K
	Mu19KsubB, Mu19KsubA, Mu19KsubC	MURINE_19K
	Pae_G1a	P_AERUGINOSA
	Plasmodium_Anopheles	Plasmodium_Anopheles
	Poplar	Poplar
	Porcine	Porcine
	RAE230A, RAE230B	RAE230
	Rat230_2	RAT230_2
	RatToxFX	RatToxFX
	RG_U34B, RG_U34C, RG_U34A	RAT_GENOME
	Rhesus	Rhesus
	Rice	Rice
	RN_U34	RAT_NEURO
	RT_U34	RAT_TOXICOLOGY
	Soybean	Soybean
	Sugar_Cane	Sugar_Cane
	S_aureus	S_aureus
	Test3	TEST3
	Tomato	Tomato
	U133_X3P	U133_X3P
	Vitis_Vinifera	Vitis_Vinifera
	wheat	wheat
	Xenopus_laevis	Xenopus_laevis
	X_tropicalis	X_tropicalis
	Yeast_2	Yeast_2
	YG_S98	YEAST
	Zebrafish	ZEBRAFISH
mapping	GenomeWideSNP_5	GenomeWideSNP_5
	GenomeWideSNP_6	GenomeWideSNP_6
	Mapping10K_Xba131	10K
	Mapping10K_Xba142	Mapping10K_Xba142
	Mapping250K_Nsp	Mapping250K_Nsp
	Mapping250K_Sty	Mapping250K_Sty
	Mapping50K_Hind240	Mapping50K_Hind240
	Mapping50K_Xba240	Mapping50K_Xba240
mip	Bovine_10KPanel_R1.5	Bovine_10KPanel_R1.5
	Bovine_25KPanel_R3	Bovine_25KPanel_R3
	cSNP I+II_20KPanel_R1.5	cSNP I+II_20KPanel_R1.5
	cSNP_I_10KPanel_R1.5	cSNP_I_10KPanel_R1.5
	DMET_Panel	DMET_Panel
	HuGeneFocused50K	HuGeneFocused50K
	HuGenomeWide50K	HuGenomeWide50K
	Immune_and_Inflam_9KPanel_R1.5	Immune_and_Inflam_9KPanel_R1.5
	MALD_3KPanel_R1.5	MALD_3KPanel_R1.5
	Mouse_5KPanel_R1.5	Mouse_5KPanel_R1.5
	Rat_I_5KPanel_R1.5	Rat_I_5KPanel_R1.5