GeneChip Tiling Arrays - Data Analysis File Updates

These update files are intended for use with the Tiling Analysis Software (TAS) Suite used to analyze the GeneChip Tiling Arrays. For more information on TAS or to obtain the most recent version of TAS, please refer to the Tiling Array Support page.

At product introduction, tiling arrays are released with analysis information corresponding to the most current genome releases available. In an effort to continue supporting our customers, we regularly update the tiling analysis support files to the latest NCBI genome releases. Please review the currently available updates, organized by version of genome. If you have any questions please contact our customer support group.

Files Updated

BPMAP Files

BPMAP (Binary Probe Map) file contains the genomic probe position map. The BPMAP file maps the X/Y coordinate of a probe on a GeneChip array to a genomic position for an intended function. It designates a probe as either a perfect match (PM) or a mismatch (MM) probe. The mapping between probe and genomic position may change as the genome annotations are revised.

BAR Files:

The BAR (Binary Analysis Results) and CHP files store the probe signal and the calculated p-values.

BED Files:

The BED file stores the start and stop positions of each computed interval. Click here for more informationon the BED file format.

IMPORTANT:

Due to the large file size the download may take an extended period of time. We apologize for any inconvenience this may cause and appreciate your patience. We continue to work towards improvements to shorten the download times.

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NCBI Version 35 Updates

Human Tiling Arrays:

Hs35b_MR_NCBIv35.BPMAP.zip (925 MB) >

Human Tiling 1.0R Array - This folder contains the BPMAP files as well as the probe display files.

Hs35b_PR_NCBIv35.BPMAP.zip (762 MB) >

Human Tiling 2.0R Array - This folder contains the BPMAP files as well as the probe display files.

Hs35b_PromPR_NCBIv35.BPMAP.zip (76 MB) >

Human Promoter 1.0R Array - This folder contains the BPMAP files as well as the probe display files.

Mouse Tiling Arrays:

Mm35b_MR_NCBIv35.BPMAP.zip (782 MB) >

Mouse Tiling 1.1R Array - This folder contains the BPMAP files as well as the probe display files.

Mm35b_PR_NCBIv35.BPMAP.zip (660 MB) >

Mouse Tiling 2.0R Array - This folder contains the BPMAP files as well as the probe display files.

Mm35b_PromPR_NCBIv35.BPMAP.zip (95 MB) >

Mouse Promoter 1.0R Array - This folder contains the BPMAP files as well as the probe display files.

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