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Affymetrix® Microarray - Comparison Analysis Spreadsheets

The following microarray comparison analysis spreadsheets are designed to help expression analysis customers compare and understand the relationship between the data generated using related GeneChip® Arrays.

As sequence databases evolve, we periodically update our expression products to ensure that you have the greatest and most accurate genome coverage possible. In addition, as advances are made in the technology for designing and making these products, we pass on these improvements with product updates. These changes often mean that particular sequences or clusters are represented differently between versions of a product. The microarray comparisons are available for both same species and cross species, as listed below.

User's Guide to Affymetrix Microarray Comparison Spreadsheets (pdf, 82 KB) >


Microarray comparison spreadsheets are available for:

Same Species Array Comparisons

Arabidopsis Genome to Arabidopsis ATH1 Array

No Match (zip, 2 KB) >

Good Match (zip, 123 KB) >

Best Match (zip, 123 KB) >

Complex (zip, 147 KB) >

Canine Genome to Canine Genome 2.0 Array

No Match (zip, 16 KB) >

Good Match (zip, 464 KB) >

Best Match (zip, 424 KB) >

Complex (zip, 728 KB) >

Drosophila Genome to Drosophila Genome 2.0 Array

No Match (zip, 2 KB) >

Good Match (zip, 160 KB) >

Best Match (zip, 159 KB) >

Complex (zip, 513 KB) >

E. coli Antisense Genome to E. coli Genome 2.0 Array

No Match (zip, 15 KB) >

Good Match (zip, 102 KB) >

Best Match (zip, 100 KB) >

Complex (zip, 233 KB) >

Human Exon 1.0 ST to Human Gene 1.0 ST Array

No Match (zip, 313 KB) >

Good Match (zip, 520 KB) >

Best Match (zip, 484 KB) >

Complex Match (zip, 28.2 MB) >

Human Genome U133 Plus 2.0 Array to Human Exon 1.0 ST Array

No Match (zip, 1.5 KB) >

Good Match (zip, 937 KB) >

Best Match (zip, 899 KB) >

Complex Match (zip, 36 MB) >

Human Genome U133 Plus 2.0 Array to Human Gene 1.0 ST Array

No Match (zip, 38 KB) >

Good Match (zip, 658 KB) >

Best Match (zip, 651 KB) >

Complex Match (zip, 2.7 MB) >

Human Genome U133 to Human Genome U133 Plus 2.0 Array

No Match (zip, 1 KB) >

Good Match (zip, 5 KB) >

Best Match (zip, 5 KB) >

Complex (zip, 24 MB) >

Human Genome U133 Plus 2.0 Array to Human Genome X3P Array

No Match (zip, 46 KB) >

Best Match (zip, 2.2 MB) >

HG-U133 Plus to X3P, Column Descriptions (zip, 4 KB) >

Human Genome U95 to Human Genome U133 Plus 2.0 Array

No Match (zip, 1 KB) >

Good Match (zip, 37 KB) >

Best Match (zip, 35 KB) >

Complex (zip, 37 MB) >

Human Genome U95 to Human Genome U133 Array

No Match (zip, 54 KB) >

Good Match (zip, 900 KB) >

Best Match (zip, 842 KB) >

Complex zip, 23.3 MB) >

Mouse Exon 1.0 ST to Mouse Expression 430 Array

No Match (zip, 515 KB) >

Good Match (zip, 1.08 MB) >

Best Match (zip, 1.02 MB) >

Complex Match (zip, 5.93 MB) >

Mouse Exon 1.0 ST to Mouse Gene 1.0 ST Array

No Match (zip, 2.95 KB) >

Good Match (zip, 819 KB) >

Best Match (zip, 599 KB) >

Complex Match (zip, 6.72 MB) >

Mouse Gene 1.0 ST to Mouse Expression 430 Array

No Match (zip, 36 KB) >

Good Match (zip, 649 KB) >

Best Match (zip, 485 KB) >

Complex Match (zip, 1.2 MB) >

Murine Genome U74v2 to Mouse Expression 430 Array

No Match (zip, 1 KB) >

Good Match (zip, 555 KB) >

Best Match (zip, 525 KB) >

Complex (zip, 25 MB) >

Rat Expression 230 to Rat Exon 1.0 ST Array

No Match (zip, 720 KB) >

Good Match (zip, 606 KB) >

Best Match (zip, 570 KB) >

Complex Match (zip, 1.6 MB) >

Rat Expression 230 to Rat Gene 1.0 ST Array

No Match (zip, 38.7 KB) >

Good Match (zip, 316 KB)>

Best Match (zip, 271 KB) >

Complex Match (zip, 524 KB) >

Rat Genome U34 to Rat Expression 230 Array

Good Match (zip, 425 KB) >

Best Match (zip, 417 KB) >

Complex Match (zip, 16 MB) >

Rat Neurobiology U34 to Rat Expression 230 Array

No Match (zip, 1 KB) >

Good Match (zip, 23 KB) >

Best Match (zip, 21 KB) >

Complex (zip, 909 KB) >

Rat Toxicology U34 to Rat Expression 230 Array

No Match (zip, 1 KB) >

Good Match (zip, 18 KB) >

Best Match (zip, 16 KB) >

Complex (zip, 583 KB) >

Yeast Genome S98 to Yeast Genome 2.0 Array

No Match (zip, 7 KB) >

Good Match (zip, 82 KB) >

Best Match (zip, 81 KB) >

Complex (zip, 139 KB) >

 

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Cross Species Array Comparisons

Bovine to Human Genome U133 Plus 2.0 Array

No Match (zip, 26 KB) >

Good Match (zip, 103 KB) >

Best Match (zip, 100 KB) >

Complex (zip, 598 KB) >

Canine to Human Genome U133 Plus 2.0 Array

No Match (zip, 30 KB) >

Good Match (zip, 20 KB) >

Best Match (zip, 19 KB) >

Complex (zip, 433 KB) >

Canine 2.0 Genome Array to Human Genome U133 Plus 2.0 Array

No Match (zip, 32 KB) >

Good Match (zip, 182 KB) >

Best Match (zip, 164 KB) >

Complex (zip, 1.4 MB) >

Canine to Mouse Expression 430 Array

No Match (zip, 37 KB) >

Good Match (zip, 5 KB) >

Best Match Best Match (zip, 5 KB) >

Complex (zip, 313 KB) >

Canine to Rat Expression 230 Array

No Match (zip, 42 KB) >

Good Match (zip, 5 KB) >

Best Match (zip, 5 KB) >

Complex (zip, 224 KB) >

Human Genome U133 Plus 2.0 to Rhesus Macaque Genome Array

No Match (zip, 5.33 KB) >

Good Match (zip, 1.59 MB) >

Best Match (zip, 1.16 MB) >

Complex (zip, 26.3 MB) >

Mouse Expression 430 to Human Genome U133 Plus 2.0 Array

No Match (zip, 111 KB) >

Good Match (zip, 1 KB) >

Best Match (zip, 1 KB) >

Complex (zip, 513 KB) >

Mouse Expression 430 to Rat Genome U34 Array

No Match (zip, 1 KB) >

Good Match (zip, 89 KB) >

Best Match (zip, 84 KB) >

Complex (zip, 44 MB) >

Murine Genome U74v2 to Rat Genome U34 Array

No Match (zip, 1 KB) >

Good Match (zip, 66 KB) >

Best Match (zip, 64 KB) >

Complex (zip, 33 MB) >

Porcine Genome Array to Human Genome U133 Plus 2.0 Array

No Match (zip, 28 KB) >

Good Match (zip, 112 KB) >

Best Match (zip, 109 KB) >

Complex (zip, 596 KB) >

Rat Expression 230 to Human Genome U133 Plus 2.0 Array

No Match (zip, 79 KB) >

Good Match (zip, 1 KB) >

Best Match (zip, 1 KB) >

Complex (zip, 225 KB) >

Rat Expression 230 to Mouse Expression 430 Array

No Match (zip, 1KB) >

Good Match (zip, 108 KB) >

Best Match (zip, 103 KB) >

Complex (zip, 25 MB) >

Rat Expression 230 to Murine Genome U74v2 Array

No Match (zip, 1 KB) >

Good Match (zip, 72 KB) >

Best Match (zip, 70 KB) >

Complex (zip, 41 MB) >

 

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