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Zebrafish Genome Array - Support Materials

For more information, please see the product page.

Data Sheets

Zebrafish Genome Array (pdf, 605 KB)

Frequently Asked Questions

Gene Expression Arrays

Library Files

Zebrafish Genome Array (zip, 12 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf 8.41 MB)

Probe Set Data in MAGE-ML Format

Package Inserts

Zebrafish Genome Array (pdf, 491 KB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Zebrafish Alignments To Genome, PSL Format (1.7 MB, 9/15/08)

Current NetAffx Annotation Files

Zebrafish Annotations, CSV format, Release 30 (3.6 MB, 11/15/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 30 (23 MB, 11/15/09)

Zebrafish BLASTP annotations, CSV Format, Release 30 (26 KB, 11/16/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 30 (3.4 MB, 11/15/09)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Zebrafish Consensus Sequences, FASTA (5.0 MB, 8/20/08)

Zebrafish Control Sequences, FASTA (43 KB, 2/5/04)

Zebrafish Probe Sequences, FASTA (4.4 MB, 8/20/08)

Zebrafish Probe Sequences, Tabular (4.0 MB, 8/20/08)

Zebrafish Target Sequences, FASTA (2.5 MB, 8/20/08)

Archived NetAffx Alignment Files

Zebrafish Alignments To Genome, PSL Format (1.9 MB, 11/17/06)

Archived NetAffx Annotation Files

Zebrafish Annotations, CSV format, Release 21 (3.5 MB, 5/31/07)

Zebrafish Annotations, CSV format, Release 22 (3.6 MB, 5/31/07)

Zebrafish Annotations, CSV format, Release 23 (3.6 MB, 7/12/07)

Zebrafish Annotations, CSV format, Release 24 (3.4 MB, 11/6/07)

Zebrafish Annotations, CSV format, Release 25 (3.3 MB, 3/19/08)

Zebrafish Annotations, CSV format, Release 26 (3.5 MB, 7/8/08)

Zebrafish Annotations, CSV format, Release 27 (3.5 MB, 11/30/08)

Zebrafish Annotations, CSV format, Release 28 (3.5 MB, 3/12/09)

Zebrafish Annotations, CSV format, Release 29 (3.6 MB, 7/1/09)

Zebrafish Annotations, CSV, Release 20 (3.3 MB, 5/31/07)

Zebrafish Annotations, MAGE-ML XML format, Release 21 (16 MB, 6/15/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 22 (16 MB, 6/15/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 23 (16 MB, 7/12/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 24 (20 MB, 11/6/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 25 (20 MB, 3/19/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 26 (20 MB, 7/8/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 27 (21 MB, 11/24/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 28 (22 MB, 3/12/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 29 (22 MB, 7/1/09)

Zebrafish Annotations, MAGE-ML XML, Release 20 (17 MB, 6/15/07)

Zebrafish BLASTP annotations, CSV format, Release 21 (112 KB, 11/15/06)

Zebrafish BLASTP annotations, CSV Format, Release 22 (109 KB, 3/9/07)

Zebrafish BLASTP annotations, CSV Format, Release 23 (48 KB, 7/12/07)

Zebrafish BLASTP annotations, CSV Format, Release 24 (22 KB, 11/6/07)

Zebrafish BLASTP annotations, CSV Format, Release 25 (1.8 KB, 3/18/08)

Zebrafish BLASTP annotations, CSV Format, Release 26 (1.5 KB, 7/8/08)

Zebrafish BLASTP annotations, CSV Format, Release 27 (23 KB, 11/24/08)

Zebrafish BLASTP annotations, CSV Format, Release 29 (27 KB, 7/1/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 24 (2.5 MB, 11/6/07)

Zebrafish Orthologs/Homologs, CSV Format, Release 25 (2.6 MB, 3/18/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 26 (2.6 MB, 7/8/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 27 (2.9 MB, 11/24/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 28 (3.4 MB, 3/12/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 29 (3.3 MB, 7/1/09)