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Tomato Genome Array - Support Materials

For more information, please see the product page.

Data Sheets

Tomato Genome Array (pdf, 292 KB)

Tomato Genome Array (pdf, 90 KB) - Japanese Version

Frequently Asked Questions

Gene Expression Arrays

Library Files

Tomato Genome Array (zip, 6.6 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf, 8.41 MB)

Package Inserts

Tomato Genome Array (pdf, 491 KB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

Current NetAffx Annotation Files

Tomato Annotations, CSV format, Release 36 (1.9 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Tomato Consensus Sequences, FASTA (2.4 MB, 8/20/08)

Tomato Control Sequences, FASTA (57 KB, 6/21/05)

Tomato Probe Sequences, FASTA (1.9 MB, 8/20/08)

Tomato Probe Sequences, Tabular (1.8 MB, 8/20/08)

Tomato Target Sequences, FASTA (1.2 MB, 8/20/08)

Archived NetAffx Annotation Files

Tomato Annotations, BLASTP, Release 20 (87 KB, 7/14/06)

Tomato Annotations, CSV format, Release 21 (1.3 MB, 5/31/07)

Tomato Annotations, CSV format, Release 22 (1.7 MB, 5/31/07)

Tomato Annotations, CSV format, Release 23 (1.3 MB, 7/12/07)

Tomato Annotations, CSV format, Release 24 (1.3 MB, 11/6/07)

Tomato Annotations, CSV format, Release 25 (1.5 MB, 3/18/08)

Tomato Annotations, CSV format, Release 26 (1.4 MB, 7/8/08)

Tomato Annotations, CSV format, Release 27 (1.2 MB, 11/30/08)

Tomato Annotations, CSV format, Release 28 (1.2 MB, 3/12/09)

Tomato Annotations, CSV format, Release 29 (1009 KB, 7/1/09)

Tomato Annotations, CSV format, Release 30 (1012 KB, 11/15/09)

Tomato Annotations, CSV format, Release 31 (1023 KB, 8/11/10)

Tomato Annotations, CSV format, Release 32 (1013 KB, 6/9/11)

Tomato Annotations, CSV format, Release 33 (1020 KB, 10/30/12)

Tomato Annotations, CSV format, Release 34 (1.4 MB, 1/23/14)

Tomato Annotations, CSV format, Release 35 (2.1 MB, 10/7/14)

Tomato Annotations, CSV, Release 20 (1.3 MB, 5/31/07)

Tomato Annotations, MAGE-ML XML format, Release 21 (7.0 MB, 6/15/07)

Tomato Annotations, MAGE-ML XML Format, Release 22 (7.3 MB, 6/15/07)

Tomato Annotations, MAGE-ML XML Format, Release 23 (6.9 MB, 7/12/07)

Tomato Annotations, MAGE-ML XML Format, Release 24 (6.9 MB, 11/6/07)

Tomato Annotations, MAGE-ML XML Format, Release 25 (6.9 MB, 3/18/08)

Tomato Annotations, MAGE-ML XML Format, Release 26 (6.9 MB, 7/8/08)

Tomato Annotations, MAGE-ML XML Format, Release 27 (6.7 MB, 11/24/08)

Tomato Annotations, MAGE-ML XML Format, Release 28 (6.7 MB, 3/12/09)

Tomato Annotations, MAGE-ML XML Format, Release 29 (6.5 MB, 7/1/09)

Tomato Annotations, MAGE-ML XML Format, Release 30 (6.5 MB, 11/15/09)

Tomato Annotations, MAGE-ML XML Format, Release 31 (6.5 MB, 8/11/10)

Tomato Annotations, MAGE-ML XML Format, Release 32 (6.5 MB, 6/9/11)

Tomato Annotations, MAGE-ML XML, Release 20 (6.9 MB, 6/15/07)

Tomato BLASTP annotations, CSV format, Release 21 (79 KB, 11/15/06)

Tomato BLASTP annotations, CSV Format, Release 32 (2.0 KB, 6/9/11)