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Soybean Genome Array - Support Materials

For more information, please see the product page.

Data Sheets

Soybean Genome Array (pdf, 116 KB)

Soybean Genome Array (pdf, 116 KB) - Japanese Version

Frequently Asked Questions

Gene Expression Arrays

Library Files

Soybean Genome Array (zip, 31 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 895 KB)

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf 8.41 MB)

Probe Set Data in MAGE-ML Format

Package Inserts

Soybean Genome Array (pdf, 512 KB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

Current NetAffx Annotation Files

Soybean Annotations, CSV format, Release 30 (5.8 MB, 11/15/09)

Soybean Annotations, MAGE-ML XML Format, Release 30 (43 MB, 11/15/09)

Soybean BLASTP annotations, CSV Format, Release 30 (689 KB, 11/16/09)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Soy Consensus Sequences, FASTA (17 MB, 8/20/08)

Soy Control Sequences, FASTA (62 KB, 8/16/04)

Soybean Probe Sequences, FASTA (12 MB, 8/20/08)

Soybean Probe Sequences, Tabular (11 MB, 8/20/08)

Soy Target Sequences, FASTA (8.3 MB, 8/20/08)

Archived NetAffx Annotation Files

Soybean Annotations, CSV format, Release 21 (7.1 MB, 5/31/07)

Soybean Annotations, CSV format, Release 22 (6.9 MB, 5/31/07)

Soybean Annotations, CSV format, Release 23 (7.2 MB, 7/12/07)

Soybean Annotations, CSV format, Release 24 (6.8 MB, 11/6/07)

Soybean Annotations, CSV format, Release 25 (7.0 MB, 3/18/08)

Soybean Annotations, CSV format, Release 26 (7.0 MB, 7/8/08)

Soybean Annotations, CSV format, Release 27 (6.5 MB, 11/30/08)

Soybean Annotations, CSV format, Release 28 (5.7 MB, 3/12/09)

Soybean Annotations, CSV format, Release 29 (5.6 MB, 7/1/09)

Soybean Annotations, MAGE-ML XML format, Release 21 (44 MB, 6/15/07)

Soybean Annotations, MAGE-ML XML Format, Release 22 (43 MB, 6/15/07)

Soybean Annotations, MAGE-ML XML Format, Release 23 (44 MB, 7/12/07)

Soybean Annotations, MAGE-ML XML Format, Release 24 (43 MB, 11/6/07)

Soybean Annotations, MAGE-ML XML Format, Release 25 (43 MB, 3/18/08)

Soybean Annotations, MAGE-ML XML Format, Release 26 (43 MB, 7/8/08)

Soybean Annotations, MAGE-ML XML Format, Release 27 (43 MB, 11/24/08)

Soybean Annotations, MAGE-ML XML Format, Release 28 (42 MB, 3/12/09)

Soybean Annotations, MAGE-ML XML Format, Release 29 (42 MB, 7/1/09)

Soybean BLASTP annotations, CSV Format, Release 22 (6.8 KB, 3/9/07)

Soybean BLASTP annotations, CSV Format, Release 23 (6.1 KB, 7/12/07)

Soybean BLASTP annotations, CSV Format, Release 24 (4.5 KB, 11/6/07)

Soybean BLASTP annotations, CSV Format, Release 25 (688 B, 3/18/08)

Soybean BLASTP annotations, CSV Format, Release 26 (5.8 KB, 7/8/08)

Soybean BLASTP annotations, CSV Format, Release 28 (464 B, 3/4/09)

Soybean BLASTP annotations, CSV Format, Release 29 (6.9 KB, 7/1/09)

Soybean Soybean Annotations, MAGE-ML XML, Release 20 (43 MB, 6/15/07)