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Rat Toxicology U34 Array - Support Materials

For more information, please see the product page.

Array Comparisons

User's Guide to Product Comparison Spreadsheets (pdf, 82 KB)

RTU34 to Rat 230, Best Match (zip, 16 KB)

RTU34 to Rat 230, Complex (zip, 583 KB)

RTU34 to Rat 230, Good Match (zip, 18 KB)

RTU34 to Rat 230, No Match (zip, 1 KB)

Data Sheets

Made-to-Order Program (pdf, 144 KB)

Frequently Asked Questions

Gene Expression Arrays

Library Files

Rat Toxicology U34 Array (zip, 2.77 MB)

Manuals

Alignment Data in PSL Format

Probe Set Data in MAGE-ML Format

Package Inserts

Rat Toxicology U34 (pdf, 89 KB)

Technical Notes

Annotation Methodology

Manufacturing Quality Control and Validation Studies of GeneChip® Arrays (pdf, 3.28 MB)

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

RT_U34 Alignments To Genome, PSL Format (142 KB, 11/17/06)

Current NetAffx Annotation Files

RT_U34 Annotations, CSV format, Release 30 (467 KB, 11/15/09)

RT_U34 Annotations, MAGE-ML XML Format, Release 30 (2.3 MB, 11/15/09)

RT_U34 BLASTP annotations, CSV Format, Release 30 (1.7 KB, 11/16/09)

RT_U34 Orthologs/Homologs, CSV Format, Release 30 (340 KB, 11/15/09)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

RT_U34 Control Sequences, FASTA (20 KB, 3/28/03)

RT_U34 Exemplar Sequences, FASTA (392 KB, 3/28/03)

RT_U34 Probe Sequences, FASTA (284 KB, 8/20/08)

RT_U34 Probe Sequences, Tabular (256 KB, 8/20/08)

RT_U34 Target Sequences, FASTA (160 KB, 8/20/08)

Archived NetAffx Alignment Files

RT_U34 Alignments to Genome, PSL (147 KB, 10/4/04)

Archived NetAffx Annotation Files

RT_U34 Annotations, BLASTP, Release 20 (145 KB, 7/14/06)

RT_U34 Annotations, BLASTX, Release 20 (120 KB, 6/23/04)

RT_U34 Annotations, CSV format, Release 21 (357 KB, 5/31/07)

RT_U34 Annotations, CSV format, Release 22 (379 KB, 5/31/07)

RT_U34 Annotations, CSV format, Release 23 (382 KB, 7/12/07)

RT_U34 Annotations, CSV format, Release 24 (377 KB, 11/6/07)

RT_U34 Annotations, CSV format, Release 25 (398 KB, 3/18/08)

RT_U34 Annotations, CSV format, Release 26 (410 KB, 7/8/08)

RT_U34 Annotations, CSV format, Release 27 (416 KB, 11/30/08)

RT_U34 Annotations, CSV format, Release 28 (418 KB, 3/12/09)

RT_U34 Annotations, CSV format, Release 29 (447 KB, 7/1/09)

RT_U34 Annotations, CSV, Release 20 (343 KB, 5/31/07)

RT_U34 Annotations, MAGE-ML XML format, Release 21 (2.1 MB, 6/15/07)

RT_U34 Annotations, MAGE-ML XML Format, Release 22 (1.9 MB, 6/15/07)

RT_U34 Annotations, MAGE-ML XML Format, Release 23 (1.9 MB, 7/12/07)

RT_U34 Annotations, MAGE-ML XML Format, Release 24 (1.9 MB, 11/6/07)

RT_U34 Annotations, MAGE-ML XML Format, Release 25 (1.9 MB, 3/18/08)

RT_U34 Annotations, MAGE-ML XML Format, Release 26 (2.0 MB, 7/8/08)

RT_U34 Annotations, MAGE-ML XML Format, Release 27 (2.0 MB, 11/24/08)

RT_U34 Annotations, MAGE-ML XML Format, Release 28 (2.1 MB, 3/12/09)

RT_U34 Annotations, MAGE-ML XML Format, Release 29 (2.2 MB, 7/1/09)

RT_U34 Annotations, MAGE-ML XML, Release 20 (2.1 MB, 6/15/07)

RT_U34 Annotations, Orthologs, Release 20 (256 KB, 8/21/06)

RT_U34 BLASTP annotations, CSV format, Release 21 (145 KB, 11/15/06)

RT_U34 BLASTP annotations, CSV Format, Release 22 (2.0 KB, 3/9/07)

RT_U34 BLASTP annotations, CSV Format, Release 23 (3.1 KB, 7/12/07)

RT_U34 BLASTP annotations, CSV Format, Release 24 (735 B, 11/6/07)

RT_U34 BLASTP annotations, CSV Format, Release 25 (640 B, 3/18/08)

RT_U34 BLASTP annotations, CSV Format, Release 26 (955 B, 7/8/08)

RT_U34 BLASTP annotations, CSV Format, Release 27 (2.4 KB, 11/24/08)

RT_U34 BLASTP annotations, CSV Format, Release 28 (1.1 KB, 3/4/09)

RT_U34 BLASTP annotations, CSV Format, Release 29 (1.7 KB, 7/1/09)

RT_U34 Orthologs/Homologs, CSV format, Release 21 (272 KB, 11/30/06)

RT_U34 Orthologs/Homologs, CSV Format, Release 22 (295 KB, 3/9/07)

RT_U34 Orthologs/Homologs, CSV Format, Release 23 (286 KB, 7/12/07)

RT_U34 Orthologs/Homologs, CSV Format, Release 24 (279 KB, 11/6/07)

RT_U34 Orthologs/Homologs, CSV Format, Release 25 (276 KB, 3/18/08)

RT_U34 Orthologs/Homologs, CSV Format, Release 26 (304 KB, 7/8/08)

RT_U34 Orthologs/Homologs, CSV Format, Release 27 (309 KB, 11/24/08)

RT_U34 Orthologs/Homologs, CSV Format, Release 28 (335 KB, 3/12/09)

RT_U34 Orthologs/Homologs, CSV Format, Release 29 (329 KB, 7/1/09)