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Rat ToxFX 1.0 Array - Support Materials

For more information, please see the product page.

Data Sheets

GeneChip 3' IVT Array Data Sheet, Human, Mouse, Rat (pdf, 9.05MB)-Japanese Version

ToxFX™ Analysis Suite (pdf, 234 KB)

Frequently Asked Questions

Gene Expression Arrays

Rat ToxFX 1.0 Array

Library Files

Rat ToxFX 1.0 Array (zip, 3.26 MB)

ToxFX Gene List (zip, 170KB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf, 8.41 MB)

ToxFX™ Analysis Suite Manual (pdf, 1.0 MB)

Package Inserts

Rat ToxFX 1.0 Array (pdf, 212 KB)

Additional Support

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

RatToxFX BED File (98 KB, 1/23/14)

Current NetAffx Annotation Files

RatToxFX Annotations, CSV format, Release 36 (1.3 MB, 4/13/16)

RatToxFX Orthologs/Homologs, CSV Format, Release 36 (792 KB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

RatToxFX Consensus Sequences FASTA Format (993 KB, 11/9/06)

RatToxFX Control Sequences FASTA Format (30 KB, 11/9/06)

RatToxFX Probe Sequences, FASTA format (435 KB, 11/9/06)

RatToxFX Probe Sequences, tabular format (397 KB, 11/9/06)

RatToxFX Target Sequences FASTA Format (468 KB, 11/9/06)

Archived NetAffx Annotation Files

RatToxFX Annotations, CSV format, Release 21 (752 KB, 5/31/07)

RatToxFX Annotations, CSV format, Release 22 (807 KB, 5/31/07)

RatToxFX Annotations, CSV format, Release 23 (782 KB, 7/12/07)

RatToxFX Annotations, CSV format, Release 24 (775 KB, 11/6/07)

RatToxFX Annotations, CSV format, Release 25 (776 KB, 3/18/08)

RatToxFX Annotations, CSV format, Release 26 (818 KB, 7/8/08)

RatToxFX Annotations, CSV format, Release 27 (832 KB, 11/30/08)

RatToxFX Annotations, CSV format, Release 28 (831 KB, 3/12/09)

RatToxFX Annotations, CSV format, Release 29 (875 KB, 7/1/09)

RatToxFX Annotations, CSV format, Release 30 (912 KB, 11/15/09)

RatToxFX Annotations, CSV format, Release 31 (955 KB, 8/11/10)

RatToxFX Annotations, CSV format, Release 32 (971 KB, 6/9/11)

RatToxFX Annotations, CSV format, Release 33 (1.1 MB, 10/30/12)

RatToxFX Annotations, CSV format, Release 34 (1.1 MB, 1/23/14)

RatToxFX Annotations, CSV format, Release 35 (1.2 MB, 10/7/14)

RatToxFX Annotations, MAGE-ML XML format, Release 21 (3.8 MB, 6/15/07)

RatToxFX Annotations, MAGE-ML XML Format, Release 22 (3.5 MB, 6/15/07)

RatToxFX Annotations, MAGE-ML XML Format, Release 23 (3.4 MB, 7/12/07)

RatToxFX Annotations, MAGE-ML XML Format, Release 24 (3.4 MB, 11/6/07)

RatToxFX Annotations, MAGE-ML XML Format, Release 25 (3.4 MB, 3/18/08)

RatToxFX Annotations, MAGE-ML XML Format, Release 26 (3.5 MB, 7/8/08)

RatToxFX Annotations, MAGE-ML XML Format, Release 27 (3.6 MB, 11/24/08)

RatToxFX Annotations, MAGE-ML XML Format, Release 28 (3.7 MB, 3/12/09)

RatToxFX Annotations, MAGE-ML XML Format, Release 29 (3.7 MB, 7/1/09)

RatToxFX Annotations, MAGE-ML XML Format, Release 30 (3.9 MB, 11/15/09)

RatToxFX Annotations, MAGE-ML XML Format, Release 31 (4.0 MB, 8/11/10)

RatToxFX Annotations, MAGE-ML XML Format, Release 32 (4.0 MB, 6/9/11)

RatToxFX BLASTP annotations, CSV format, Release 21 (270 KB, 11/15/06)

RatToxFX BLASTP annotations, CSV Format, Release 22 (5.6 KB, 3/9/07)

RatToxFX BLASTP annotations, CSV Format, Release 23 (6.6 KB, 7/12/07)

RatToxFX BLASTP annotations, CSV Format, Release 24 (507 B, 11/6/07)

RatToxFX BLASTP annotations, CSV Format, Release 26 (764 B, 7/8/08)

RatToxFX BLASTP annotations, CSV Format, Release 27 (3.4 KB, 11/24/08)

RatToxFX BLASTP annotations, CSV Format, Release 29 (1.9 KB, 7/1/09)

RatToxFX BLASTP annotations, CSV Format, Release 30 (1.9 KB, 11/16/09)

RatToxFX BLASTP annotations, CSV Format, Release 31 (2.0 KB, 8/11/10)

RatToxFX Orthologs/Homologs, CSV format, Release 21 (485 KB, 11/30/06)

RatToxFX Orthologs/Homologs, CSV Format, Release 22 (529 KB, 3/9/07)

RatToxFX Orthologs/Homologs, CSV Format, Release 23 (493 KB, 7/12/07)

RatToxFX Orthologs/Homologs, CSV Format, Release 24 (456 KB, 11/6/07)

RatToxFX Orthologs/Homologs, CSV Format, Release 25 (461 KB, 3/18/08)

RatToxFX Orthologs/Homologs, CSV Format, Release 26 (502 KB, 7/8/08)

RatToxFX Orthologs/Homologs, CSV Format, Release 27 (518 KB, 11/24/08)

RatToxFX Orthologs/Homologs, CSV Format, Release 28 (559 KB, 3/12/09)

RatToxFX Orthologs/Homologs, CSV Format, Release 29 (547 KB, 7/1/09)

RatToxFX Orthologs/Homologs, CSV Format, Release 30 (575 KB, 11/15/09)

RatToxFX Orthologs/Homologs, CSV Format, Release 31 (569 KB, 8/11/10)

RatToxFX Orthologs/Homologs, CSV Format, Release 32 (562 KB, 6/9/11)

RatToxFX Orthologs/Homologs, CSV Format, Release 33 (706 KB, 10/30/12)

RatToxFX Orthologs/Homologs, CSV Format, Release 34 (710 KB, 1/23/14)

RatToxFX Orthologs/Homologs, CSV Format, Release 35 (774 KB, 10/7/14)