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Rice Genome Array - Support Materials

For more information, please see the product page.

Data Sheets

Rice Genome Array (pdf, 736 KB)

Rice Genome Array (pdf, 84 KB) - Japanese Version

Frequently Asked Questions

Gene Expression Arrays

Library Files

Rice Genome Array (zip, 29 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf, 8.41 MB)

Package Inserts

Rice Genome Array (pdf, 492 KB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Rice Alignments To Genome, PSL Format (5.9 MB, 11/17/06)

Current NetAffx Annotation Files

Rice Annotations, CSV format, Release 36 (9.7 MB, 4/13/16)

Rice Orthologs/Homologs, CSV Format, Release 36 (2.8 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Rice Consensus Sequences, FASTA (23 MB, 8/20/08)

Rice Control Sequences, FASTA (64 KB, 12/1/04)

Rice Probe Sequences, FASTA (11 MB, 8/20/08)

Rice Probe Sequences, Tabular (10 MB, 8/20/08)

Rice Target Sequences, FASTA (7.4 MB, 8/20/08)

Archived NetAffx Annotation Files

Rice Annotations, CSV format, Release 21 (6.3 MB, 5/31/07)

Rice Annotations, CSV format, Release 22 (5.9 MB, 5/31/07)

Rice Annotations, CSV format, Release 23 (6.1 MB, 7/12/07)

Rice Annotations, CSV format, Release 24 (5.9 MB, 11/6/07)

Rice Annotations, CSV format, Release 25 (6.2 MB, 3/18/08)

Rice Annotations, CSV format, Release 26 (7.0 MB, 7/8/08)

Rice Annotations, CSV format, Release 27 (7.3 MB, 11/30/08)

Rice Annotations, CSV format, Release 28 (7.3 MB, 3/12/09)

Rice Annotations, CSV format, Release 29 (7.4 MB, 7/1/09)

Rice Annotations, CSV format, Release 30 (7.4 MB, 11/15/09)

Rice Annotations, CSV format, Release 31 (7.3 MB, 8/11/10)

Rice Annotations, CSV format, Release 32 (7.6 MB, 6/22/11)

Rice Annotations, CSV format, Release 33 (9.1 MB, 10/30/12)

Rice Annotations, CSV format, Release 34 (11 MB, 1/23/14)

Rice Annotations, CSV format, Release 35 (10 MB, 10/7/14)

Rice Annotations, CSV, Release 20 (6.0 MB, 5/31/07)

Rice Annotations, MAGE-ML XML format, Release 21 (47 MB, 6/15/07)

Rice Annotations, MAGE-ML XML Format, Release 22 (46 MB, 6/15/07)

Rice Annotations, MAGE-ML XML Format, Release 23 (47 MB, 7/12/07)

Rice Annotations, MAGE-ML XML Format, Release 24 (52 MB, 11/6/07)

Rice Annotations, MAGE-ML XML Format, Release 25 (53 MB, 3/18/08)

Rice Annotations, MAGE-ML XML Format, Release 26 (54 MB, 7/8/08)

Rice Annotations, MAGE-ML XML Format, Release 27 (55 MB, 11/24/08)

Rice Annotations, MAGE-ML XML Format, Release 28 (55 MB, 3/12/09)

Rice Annotations, MAGE-ML XML Format, Release 29 (55 MB, 7/1/09)

Rice Annotations, MAGE-ML XML Format, Release 30 (55 MB, 11/15/09)

Rice Annotations, MAGE-ML XML Format, Release 31 (55 MB, 8/11/10)

Rice Annotations, MAGE-ML XML Format, Release 32 (54 MB, 6/22/11)

Rice Annotations, MAGE-ML XML, Release 20 (48 MB, 6/15/07)

Rice BLASTP annotations, CSV format, Release 21 (152 KB, 11/15/06)

Rice BLASTP annotations, CSV Format, Release 22 (73 KB, 3/9/07)

Rice BLASTP annotations, CSV Format, Release 23 (73 KB, 7/12/07)

Rice BLASTP annotations, CSV Format, Release 24 (3.6 MB, 11/6/07)

Rice BLASTP annotations, CSV Format, Release 25 (4.2 MB, 3/18/08)

Rice BLASTP annotations, CSV Format, Release 26 (4.2 MB, 7/8/08)

Rice BLASTP annotations, CSV Format, Release 27 (4.2 MB, 11/24/08)

Rice BLASTP annotations, CSV Format, Release 28 (4.2 MB, 3/4/09)

Rice BLASTP annotations, CSV Format, Release 29 (4.3 MB, 7/1/09)

Rice BLASTP annotations, CSV Format, Release 30 (4.3 MB, 11/16/09)

Rice BLASTP annotations, CSV Format, Release 31 (4.3 MB, 8/11/10)

Rice BLASTP annotations, CSV Format, Release 32 (730 KB, 6/9/11)

Rice Orthologs/Homologs, CSV format, Release 21 (245 KB, 11/30/06)

Rice Orthologs/Homologs, CSV Format, Release 23 (181 KB, 7/12/07)

Rice Orthologs/Homologs, CSV Format, Release 24 (181 KB, 11/6/07)

Rice Orthologs/Homologs, CSV Format, Release 25 (189 KB, 3/18/08)

Rice Orthologs/Homologs, CSV Format, Release 26 (250 KB, 7/8/08)

Rice Orthologs/Homologs, CSV Format, Release 27 (264 KB, 11/24/08)

Rice Orthologs/Homologs, CSV Format, Release 28 (294 KB, 3/12/09)

Rice Orthologs/Homologs, CSV Format, Release 29 (304 KB, 7/1/09)

Rice Orthologs/Homologs, CSV Format, Release 30 (342 KB, 11/15/09)

Rice Orthologs/Homologs, CSV Format, Release 31 (340 KB, 8/11/10)

Rice Orthologs/Homologs, CSV Format, Release 32 (2.6 MB, 6/22/11)

Rice Orthologs/Homologs, CSV Format, Release 33 (2.9 MB, 10/30/12)

Rice Orthologs/Homologs, CSV Format, Release 34 (3.1 MB, 1/23/14)

Rice Orthologs/Homologs, CSV Format, Release 35 (2.8 MB, 10/7/14)