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Rat Genome U34 Set - Support Materials

For more information, please see the product page.

Array Comparisons

MGU74v2 to RGU34, Best Match (zip, 64 KB)

MGU74v2 to RGU34, Good Match (zip, 66 KB)

MGU74v2 to RGU34, No Match (zip, 1 KB)

Mouse 430 to RGU34, Best Match (zip, 84 KB)

Mouse 430 to RGU34, Complex (zip, 44 MB)

Mouse 430 to RGU34, Good Match (zip, 89 KB)

Mouse 430 to RGU34, No Match (zip, 1 KB)

Data Sheets

Made-to-Order Program (pdf, 144 KB)

Frequently Asked Questions

Gene Expression Arrays

Library Files

Rat Genome U34 Set (zip, 15 MB)

Manuals

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Package Inserts

Rat Genome U34 Set (pdf, 89 KB)

Technical Notes

Annotation Methodology

Manufacturing Quality Control and Validation Studies of GeneChip® Arrays (pdf, 3.28 MB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

RG_U34A Alignments To Genome, PSL Format (1.1 MB, 11/17/06)

RG_U34B Alignments To Genome, PSL Format (607 KB, 11/17/06)

RG_U34C Alignments To Genome, PSL Format (642 KB, 11/17/06)

RG_U34A BED File (391 KB, 1/23/14)

RG_U34B BED File (195 KB, 1/23/14)

RG_U34C BED File (210 KB, 1/23/14)

Current NetAffx Annotation Files

RG_U34A Annotations, CSV format, Release 36 (5.2 MB, 4/13/16)

RG_U34B Annotations, CSV format, Release 36 (3.2 MB, 4/13/16)

RG_U34C Annotations, CSV format, Release 36 (3.5 MB, 4/13/16)

RG_U34A Orthologs/Homologs, CSV Format, Release 36 (3.4 MB, 4/13/16)

RG_U34B Orthologs/Homologs, CSV Format, Release 36 (2.7 MB, 4/13/16)

RG_U34C Orthologs/Homologs, CSV Format, Release 36 (2.9 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

RG_U34A Control Sequences, FASTA (17 KB, 3/28/03)

RG_U34B Control Sequences, FASTA (19 KB, 3/28/03)

RG_U34C Control Sequences, FASTA (17 KB, 3/28/03)

RG_U34A Exemplar Sequences, FASTA (3.4 MB, 3/28/03)

RG_U34B Exemplar Sequences, FASTA (1.4 MB, 3/28/03)

RG_U34C Exemplar Sequences, FASTA (1.5 MB, 3/28/03)

RG_U34A Probe Sequences, FASTA (1.9 MB, 8/20/08)

RG_U34B Probe Sequences, FASTA (1.8 MB, 8/20/08)

RG_U34C Probe Sequences, FASTA (1.8 MB, 8/20/08)

RG_U34A Probe Sequences, Tabular (1.7 MB, 8/20/08)

RG_U34B Probe Sequences, Tabular (1.6 MB, 8/20/08)

RG_U34C Probe Sequences, Tabular (1.6 MB, 8/20/08)

RG_U34A Target Sequences, FASTA (1.3 MB, 8/20/08)

RG_U34B Target Sequences, FASTA (1.1 MB, 8/20/08)

RG_U34C Target Sequences, FASTA (1.2 MB, 8/20/08)

Archived NetAffx Alignment Files

RG_U34A Alignments to Genome, PSL (1.1 MB, 10/4/04)

RG_U34B Alignments to Genome, PSL (611 KB, 10/4/04)

RG_U34C Alignments to Genome, PSL (645 KB, 10/4/04)

Archived NetAffx Annotation Files

RG_U34A Annotations, BLASTP, Release 20 (1.1 MB, 7/14/06)

RG_U34B Annotations, BLASTP, Release 20 (510 KB, 7/14/06)

RG_U34C Annotations, BLASTP, Release 20 (617 KB, 7/14/06)

RG_U34A Annotations, BLASTX, Release 20 (966 KB, 6/23/04)

RG_U34B Annotations, BLASTX, Release 20 (167 KB, 6/23/04)

RG_U34C Annotations, BLASTX, Release 20 (226 KB, 6/23/04)

RG_U34A Annotations, CSV format, Release 21 (2.7 MB, 5/31/07)

RG_U34B Annotations, CSV format, Release 21 (1.8 MB, 5/31/07)

RG_U34C Annotations, CSV format, Release 21 (2.0 MB, 5/31/07)

RG_U34A Annotations, CSV format, Release 22 (2.9 MB, 5/31/07)

RG_U34B Annotations, CSV format, Release 22 (1.9 MB, 5/31/07)

RG_U34C Annotations, CSV format, Release 22 (2.1 MB, 5/31/07)

RG_U34A Annotations, CSV format, Release 23 (2.9 MB, 7/12/07)

RG_U34B Annotations, CSV format, Release 23 (1.9 MB, 7/12/07)

RG_U34C Annotations, CSV format, Release 23 (2.1 MB, 7/12/07)

RG_U34A Annotations, CSV format, Release 24 (2.9 MB, 11/6/07)

RG_U34B Annotations, CSV format, Release 24 (1.8 MB, 11/6/07)

RG_U34C Annotations, CSV format, Release 24 (2.0 MB, 11/6/07)

RG_U34A Annotations, CSV format, Release 25 (2.8 MB, 3/18/08)

RG_U34B Annotations, CSV format, Release 25 (1.8 MB, 3/18/08)

RG_U34C Annotations, CSV format, Release 25 (2.0 MB, 3/18/08)

RG_U34A Annotations, CSV format, Release 26 (3.0 MB, 7/8/08)

RG_U34B Annotations, CSV format, Release 26 (1.8 MB, 7/8/08)

RG_U34C Annotations, CSV format, Release 26 (2.1 MB, 7/8/08)

RG_U34A Annotations, CSV format, Release 27 (3.0 MB, 11/30/08)

RG_U34B Annotations, CSV format, Release 27 (1.8 MB, 11/30/08)

RG_U34C Annotations, CSV format, Release 27 (2.0 MB, 11/30/08)

RG_U34A Annotations, CSV format, Release 28 (3.0 MB, 3/12/09)

RG_U34B Annotations, CSV format, Release 28 (1.8 MB, 3/12/09)

RG_U34C Annotations, CSV format, Release 28 (2.0 MB, 3/12/09)

RG_U34A Annotations, CSV format, Release 29 (3.2 MB, 7/1/09)

RG_U34B Annotations, CSV format, Release 29 (1.9 MB, 7/1/09)

RG_U34C Annotations, CSV format, Release 29 (2.1 MB, 7/1/09)

RG_U34A Annotations, CSV format, Release 30 (3.3 MB, 11/15/09)

RG_U34B Annotations, CSV format, Release 30 (1.9 MB, 11/15/09)

RG_U34C Annotations, CSV format, Release 30 (2.2 MB, 11/15/09)

RG_U34A Annotations, CSV format, Release 31 (3.4 MB, 8/11/10)

RG_U34B Annotations, CSV format, Release 31 (2.0 MB, 8/11/10)

RG_U34C Annotations, CSV format, Release 31 (2.2 MB, 8/11/10)

RG_U34A Annotations, CSV format, Release 32 (3.5 MB, 6/9/11)

RG_U34B Annotations, CSV format, Release 32 (2.0 MB, 6/9/11)

RG_U34C Annotations, CSV format, Release 32 (2.2 MB, 6/9/11)

RG_U34A Annotations, CSV format, Release 33 (4.0 MB, 10/30/12)

RG_U34B Annotations, CSV format, Release 33 (2.4 MB, 10/30/12)

RG_U34C Annotations, CSV format, Release 33 (2.6 MB, 10/30/12)

RG_U34A Annotations, CSV format, Release 34 (4.1 MB, 1/23/14)

RG_U34B Annotations, CSV format, Release 34 (2.4 MB, 1/23/14)

RG_U34C Annotations, CSV format, Release 34 (2.6 MB, 1/23/14)

RG_U34A Annotations, CSV format, Release 35 (4.7 MB, 4/16/15)

RG_U34B Annotations, CSV format, Release 35 (2.7 MB, 10/7/14)

RG_U34C Annotations, CSV format, Release 35 (3.0 MB, 10/7/14)

RG_U34A Annotations, CSV, Release 20 (2.6 MB, 5/31/07)

RG_U34B Annotations, CSV, Release 20 (1.7 MB, 5/31/07)

RG_U34C Annotations, CSV, Release 20 (1.8 MB, 5/31/07)

RG_U34A Annotations, MAGE-ML XML format, Release 21 (15 MB, 6/15/07)

RG_U34B Annotations, MAGE-ML XML format, Release 21 (10 MB, 6/15/07)

RG_U34C Annotations, MAGE-ML XML format, Release 21 (11 MB, 6/15/07)

RG_U34A Annotations, MAGE-ML XML Format, Release 22 (14 MB, 6/15/07)

RG_U34B Annotations, MAGE-ML XML Format, Release 22 (9.8 MB, 6/15/07)

RG_U34C Annotations, MAGE-ML XML Format, Release 22 (10 MB, 6/15/07)

RG_U34A Annotations, MAGE-ML XML Format, Release 23 (13 MB, 7/12/07)

RG_U34B Annotations, MAGE-ML XML Format, Release 23 (9.4 MB, 7/12/07)

RG_U34C Annotations, MAGE-ML XML Format, Release 23 (10 MB, 7/12/07)

RG_U34A Annotations, MAGE-ML XML Format, Release 24 (13 MB, 11/6/07)

RG_U34B Annotations, MAGE-ML XML Format, Release 24 (9.0 MB, 11/6/07)

RG_U34C Annotations, MAGE-ML XML Format, Release 24 (9.7 MB, 11/6/07)

RG_U34A Annotations, MAGE-ML XML Format, Release 25 (13 MB, 3/18/08)

RG_U34B Annotations, MAGE-ML XML Format, Release 25 (9.0 MB, 3/18/08)

RG_U34C Annotations, MAGE-ML XML Format, Release 25 (9.7 MB, 3/18/08)

RG_U34A Annotations, MAGE-ML XML Format, Release 26 (14 MB, 7/8/08)

RG_U34B Annotations, MAGE-ML XML Format, Release 26 (9.2 MB, 7/8/08)

RG_U34C Annotations, MAGE-ML XML Format, Release 26 (10 MB, 7/8/08)

RG_U34A Annotations, MAGE-ML XML Format, Release 27 (14 MB, 11/24/08)

RG_U34B Annotations, MAGE-ML XML Format, Release 27 (9.4 MB, 11/24/08)

RG_U34C Annotations, MAGE-ML XML Format, Release 27 (10 MB, 11/24/08)

RG_U34A Annotations, MAGE-ML XML Format, Release 28 (15 MB, 3/12/09)

RG_U34B Annotations, MAGE-ML XML Format, Release 28 (9.7 MB, 3/12/09)

RG_U34C Annotations, MAGE-ML XML Format, Release 28 (10 MB, 3/12/09)

RG_U34A Annotations, MAGE-ML XML Format, Release 29 (15 MB, 7/1/09)

RG_U34B Annotations, MAGE-ML XML Format, Release 29 (9.8 MB, 7/1/09)

RG_U34C Annotations, MAGE-ML XML Format, Release 29 (10 MB, 7/1/09)

RG_U34A Annotations, MAGE-ML XML Format, Release 30 (16 MB, 11/15/09)

RG_U34B Annotations, MAGE-ML XML Format, Release 30 (10 MB, 11/15/09)

RG_U34C Annotations, MAGE-ML XML Format, Release 30 (11 MB, 11/15/09)

RG_U34A Annotations, MAGE-ML XML Format, Release 31 (16 MB, 8/11/10)

RG_U34B Annotations, MAGE-ML XML Format, Release 31 (10 MB, 8/11/10)

RG_U34C Annotations, MAGE-ML XML Format, Release 31 (11 MB, 8/11/10)

RG_U34A Annotations, MAGE-ML XML Format, Release 32 (16 MB, 6/9/11)

RG_U34B Annotations, MAGE-ML XML Format, Release 32 (10 MB, 6/9/11)

RG_U34C Annotations, MAGE-ML XML Format, Release 32 (11 MB, 6/9/11)

RG_U34A Annotations, MAGE-ML XML, Release 20 (15 MB, 6/15/07)

RG_U34B Annotations, MAGE-ML XML, Release 20 (9.8 MB, 6/15/07)

RG_U34C Annotations, MAGE-ML XML, Release 20 (10 MB, 6/15/07)

RG_U34A Annotations, Orthologs, Release 20 (1.9 MB, 8/21/06)

RG_U34B Annotations, Orthologs, Release 20 (1.4 MB, 8/21/06)

RG_U34C Annotations, Orthologs, Release 20 (1.5 MB, 8/21/06)

RG_U34A BLASTP annotations, CSV format, Release 21 (1.1 MB, 11/15/06)

RG_U34B BLASTP annotations, CSV format, Release 21 (610 KB, 11/15/06)

RG_U34C BLASTP annotations, CSV format, Release 21 (735 KB, 11/15/06)

RG_U34A BLASTP annotations, CSV Format, Release 22 (17 KB, 3/9/07)

RG_U34B BLASTP annotations, CSV Format, Release 22 (20 KB, 3/9/07)

RG_U34C BLASTP annotations, CSV Format, Release 22 (21 KB, 3/9/07)

RG_U34A BLASTP annotations, CSV Format, Release 23 (26 KB, 7/12/07)

RG_U34B BLASTP annotations, CSV Format, Release 23 (35 KB, 7/12/07)

RG_U34C BLASTP annotations, CSV Format, Release 23 (39 KB, 7/12/07)

RG_U34A BLASTP annotations, CSV Format, Release 24 (2.6 KB, 11/6/07)

RG_U34B BLASTP annotations, CSV Format, Release 24 (793 B, 11/6/07)

RG_U34C BLASTP annotations, CSV Format, Release 24 (900 B, 11/6/07)

RG_U34A BLASTP annotations, CSV Format, Release 25 (1.1 KB, 3/18/08)

RG_U34B BLASTP annotations, CSV Format, Release 25 (544 B, 3/18/08)

RG_U34C BLASTP annotations, CSV Format, Release 25 (977 B, 3/18/08)

RG_U34A BLASTP annotations, CSV Format, Release 26 (2.7 KB, 7/8/08)

RG_U34B BLASTP annotations, CSV Format, Release 26 (1.6 KB, 7/8/08)

RG_U34C BLASTP annotations, CSV Format, Release 26 (2.3 KB, 7/8/08)

RG_U34A BLASTP annotations, CSV Format, Release 27 (15 KB, 11/24/08)

RG_U34B BLASTP annotations, CSV Format, Release 27 (14 KB, 11/24/08)

RG_U34C BLASTP annotations, CSV Format, Release 27 (19 KB, 11/24/08)

RG_U34A BLASTP annotations, CSV Format, Release 28 (2.0 KB, 3/4/09)

RG_U34B BLASTP annotations, CSV Format, Release 28 (605 B, 3/4/09)

RG_U34C BLASTP annotations, CSV Format, Release 28 (1.3 KB, 3/4/09)

RG_U34A BLASTP annotations, CSV Format, Release 29 (8.3 KB, 7/1/09)

RG_U34B BLASTP annotations, CSV Format, Release 29 (11 KB, 7/1/09)

RG_U34C BLASTP annotations, CSV Format, Release 29 (14 KB, 7/1/09)

RG_U34A BLASTP annotations, CSV Format, Release 30 (8.5 KB, 11/16/09)

RG_U34B BLASTP annotations, CSV Format, Release 30 (11 KB, 11/16/09)

RG_U34C BLASTP annotations, CSV Format, Release 30 (14 KB, 11/16/09)

RG_U34A BLASTP annotations, CSV Format, Release 31 (11 KB, 8/11/10)

RG_U34B BLASTP annotations, CSV Format, Release 31 (14 KB, 8/11/10)

RG_U34C BLASTP annotations, CSV Format, Release 31 (19 KB, 8/11/10)

RG_U34A Orthologs/Homologs, CSV format, Release 21 (2.1 MB, 11/30/06)

RG_U34B Orthologs/Homologs, CSV format, Release 21 (1.6 MB, 11/30/06)

RG_U34C Orthologs/Homologs, CSV format, Release 21 (1.7 MB, 11/30/06)

RG_U34A Orthologs/Homologs, CSV Format, Release 22 (2.2 MB, 3/9/07)

RG_U34B Orthologs/Homologs, CSV Format, Release 22 (1.8 MB, 3/9/07)

RG_U34C Orthologs/Homologs, CSV Format, Release 22 (1.9 MB, 3/9/07)

RG_U34A Orthologs/Homologs, CSV Format, Release 23 (2.1 MB, 7/12/07)

RG_U34B Orthologs/Homologs, CSV Format, Release 23 (1.6 MB, 7/12/07)

RG_U34C Orthologs/Homologs, CSV Format, Release 23 (1.7 MB, 7/12/07)

RG_U34A Orthologs/Homologs, CSV Format, Release 24 (2.0 MB, 11/6/07)

RG_U34B Orthologs/Homologs, CSV Format, Release 24 (1.4 MB, 11/6/07)

RG_U34C Orthologs/Homologs, CSV Format, Release 24 (1.5 MB, 11/6/07)

RG_U34A Orthologs/Homologs, CSV Format, Release 25 (2.0 MB, 3/18/08)

RG_U34B Orthologs/Homologs, CSV Format, Release 25 (1.4 MB, 3/18/08)

RG_U34C Orthologs/Homologs, CSV Format, Release 25 (1.6 MB, 3/18/08)

RG_U34A Orthologs/Homologs, CSV Format, Release 26 (2.3 MB, 7/8/08)

RG_U34B Orthologs/Homologs, CSV Format, Release 26 (1.5 MB, 7/8/08)

RG_U34C Orthologs/Homologs, CSV Format, Release 26 (1.8 MB, 7/8/08)

RG_U34A Orthologs/Homologs, CSV Format, Release 27 (2.3 MB, 11/24/08)

RG_U34B Orthologs/Homologs, CSV Format, Release 27 (1.6 MB, 11/24/08)

RG_U34C Orthologs/Homologs, CSV Format, Release 27 (1.8 MB, 11/24/08)

RG_U34A Orthologs/Homologs, CSV Format, Release 28 (2.4 MB, 3/12/09)

RG_U34B Orthologs/Homologs, CSV Format, Release 28 (1.7 MB, 3/12/09)

RG_U34C Orthologs/Homologs, CSV Format, Release 28 (2.0 MB, 3/12/09)

RG_U34A Orthologs/Homologs, CSV Format, Release 29 (2.4 MB, 7/1/09)

RG_U34B Orthologs/Homologs, CSV Format, Release 29 (1.7 MB, 7/1/09)

RG_U34C Orthologs/Homologs, CSV Format, Release 29 (1.9 MB, 7/1/09)

RG_U34A Orthologs/Homologs, CSV Format, Release 30 (2.5 MB, 11/15/09)

RG_U34B Orthologs/Homologs, CSV Format, Release 30 (1.8 MB, 11/15/09)

RG_U34C Orthologs/Homologs, CSV Format, Release 30 (2.0 MB, 11/15/09)

RG_U34A Orthologs/Homologs, CSV Format, Release 31 (2.5 MB, 8/11/10)

RG_U34B Orthologs/Homologs, CSV Format, Release 31 (1.7 MB, 8/11/10)

RG_U34C Orthologs/Homologs, CSV Format, Release 31 (1.9 MB, 8/11/10)

RG_U34A Orthologs/Homologs, CSV Format, Release 32 (2.5 MB, 6/9/11)

RG_U34B Orthologs/Homologs, CSV Format, Release 32 (1.7 MB, 6/9/11)

RG_U34C Orthologs/Homologs, CSV Format, Release 32 (1.9 MB, 6/9/11)

RG_U34A Orthologs/Homologs, CSV Format, Release 33 (3.0 MB, 10/30/12)

RG_U34B Orthologs/Homologs, CSV Format, Release 33 (2.1 MB, 10/30/12)

RG_U34C Orthologs/Homologs, CSV Format, Release 33 (2.4 MB, 10/30/12)

RG_U34A Orthologs/Homologs, CSV Format, Release 34 (3.2 MB, 1/23/14)

RG_U34B Orthologs/Homologs, CSV Format, Release 34 (2.2 MB, 1/23/14)

RG_U34C Orthologs/Homologs, CSV Format, Release 34 (2.5 MB, 1/23/14)

RG_U34A Orthologs/Homologs, CSV Format, Release 35 (3.3 MB, 10/7/14)

RG_U34B Orthologs/Homologs, CSV Format, Release 35 (2.4 MB, 10/7/14)

RG_U34C Orthologs/Homologs, CSV Format, Release 35 (2.7 MB, 10/7/14)