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Rat Transcriptome Assay 1.0 - Support Materials

For more information, please see the product page.

Brochure

Clariom™ assays Brochure (pdf, 1.91 MB)

Expression Microarray Reagent Guide (pdf, 244 KB)

Data Sheets

Clariom™ D solutions

Clariom™ D HMR Datasheet - Japanese version (pdf, 324KB)

Frequently Asked Questions

GeneChip® human, mouse, and rat transcriptome assays (pdf, 105 KB)

Library Files

Clariom™ D Array, rat AGCC Library File Installer (zip, 94 KB)

Clariom™ D Array, rat Exon CDF Library File (zip, 106 MB)

Clariom™ D Array, rat Gene CDF Library File (zip, 82 MB)

Clariom™ D Array, rat Main Analysis Files, r3 (zip, 136 MB)

Clariom™ D Array, rat TAC Analysis Files (zip, 42 MB)

Clariom™ D Array, rat TAC Configuration File (zip, 1.1 KB)

Manuals

Expression Console™ Software (pdf, 6 MB)

Expression Wash, Stain and Scan User Manual for Cartridge Arrays (pdf, 2.52 MB)

GeneChip® High Throughput WT PLUS Kit (pdf, 10 MB)

Sample Attribute Editor (pdf, 597 KB)

SensationPlus™ FFPE Amplification and WT Labeling Kit (pdf, 391 KB)

Transcriptome Analysis Console (pdf, 7 MB)

WT Pico Kit User Guide (pdf, 1.8 MB)

WT PLUS Reagent Kit User Manual (pdf, 2 MB)

Package Inserts

Package Insert (pdf, 153 KB)

Quick Reference Cards

Expression Console Quick Reference Card (pdf, 1.13 MB)

Sample Data

Rat Tissue Panel RTA 1.0 Sample Data CEL Files (zip, 308 MB)

Rat Tissue Panel RTA 1.0 TAC Files (zip, 52 MB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Clariom™ D Array, rat BED File (73 MB, 5/18/15)

Current NetAffx Annotation Files

Clariom™ D Array, rat Probeset Annotations, CSV Format, Release 36.1 (33 MB, 9/12/16)

Clariom™ D Array, rat Transcript Cluster Annotations, CSV, Release 36.1 (17 MB, 9/26/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Clariom™ D Array, rat Probe Sequences, FASTA format (173 MB, 2/17/15)

Clariom™ D Array, rat Probe Sequences, tabular format (154 MB, 2/17/15)

Archived NetAffx Annotation Files

Clariom™ D Array, rat Probeset Annotations, CSV Format (29 MB, 4/15/15)

Clariom™ D Array, rat Probeset Annotations, CSV Format, Release 35 (32 MB, 2/24/15)

Clariom™ D Array, rat Probeset Annotations, CSV Format, Release 35.1 (33 MB, 11/20/15)

Clariom™ D Array, rat Probeset Annotations, CSV Format, Release 35.2 (33 MB, 2/17/16)

Clariom™ D Array, rat Probeset Annotations, CSV Format, Release 36 (33 MB, 7/6/16)

Clariom™ D Array, rat Transcript Cluster Annotations, CSV, Release 35 (7.4 MB, 2/24/15)

Clariom™ D Array, rat Transcript Cluster Annotations, CSV, Release 35.2 (16 MB, 7/20/15)

Clariom™ D Array, rat Transcript Cluster Annotations, CSV, Release 35.3 (16 MB, 11/20/15)

Clariom™ D Array, rat Transcript Cluster Annotations, CSV, Release 36 (17 MB, 7/6/16)

Archived Library Files

Clariom™ D Array, rat Main Analysis Files, r2 (zip, 136 MB)