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Rat Genome 230 2.0 Array - Support Materials

For more information, please see the product page.

Brochure

Expression Microarray Reagent Guide (pdf, 244 KB)

Array Comparisons

Canine to RAE230, All (zip, 224 KB)

Canine to RAE230, Best Match (zip, 5 KB)

Canine to RAE230, Good Match (zip, 5 KB)

Canine to RAE230, No Match (zip, 42 KB)

Rat 230 to HG-U133 Plus, Best Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, Complex (zip, 225 KB)

Rat 230 to HG-U133 Plus, Good Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, No Match (zip, 79 KB)

Rat 230 to MGU74v2, Best Match (zip, 70 KB)

Rat 230 to MGU74v2, Complex (zip, 41 MB)

Rat 230 to MGU74v2, Good Match (zip, 72 KB)

Rat 230 to MGU74v2, No match (zip, 1 KB)

Rat 230 to Mouse 430, Best Match (zip, 103 KB)

Rat 230 to Mouse 430, Complex (zip, 25 MB)

Rat 230 to Mouse 430, Good Match (zip, 108 KB)

Rat 230 to Mouse 430, No Match (zip, 1KB)

Rat 230 to Rat Exon 1.0 ST, Best Match (zip, 570 KB)

Rat 230 to Rat Exon 1.0 ST, Complex Match (zip, 1.6 MB)

Rat 230 to Rat Exon 1.0 ST, Good Match (zip, 606 KB)

Rat 230 to Rat Exon 1.0 ST, No Match (zip, 720 KB)

Rat 230 to Rat Gene 1.0 ST, Best Match (zip, 272 KB)

Rat 230 to Rat Gene 1.0 ST, Complex Match (zip, 525 KB)

Rat 230 to Rat Gene 1.0 ST, Good Match (zip, 317 KB)

Rat 230 to Rat Gene 1.0 ST, No Match (zip, 39 KB)

RGU34 to Rat 230, Best Match (zip, 417 KB)

RGU34 to Rat 230, Complex (zip, 16 MB)

RGU34 to Rat 230, Good Match (zip, 425 KB)

RGU34 to Rat 230, No Match (zip, 1 KB)

RNU34 to Rat 230, Best Match (zip, 21 KB)

RNU34 to Rat 230, Complex (zip, 909 KB)

RNU34 to Rat 230, Good Match (zip, 23 KB)

RNU34 to Rat 230, No Match (zip, 1 KB)

RTU34 to Rat 230, Best Match (zip, 16 KB)

RTU34 to Rat 230, Complex (zip, 583 KB)

RTU34 to Rat 230, Good Match (zip, 18 KB)

RTU34 to Rat 230, No Match (zip, 1 KB)

Data Sheets

GeneChip 3' IVT Array Data Sheet, Human, Mouse, Rat (pdf, 9.05MB)-Japanese Version

Rat Genome 230 2.0 Array (pdf, 106 KB) - Japanese Version

Rat Genome 230 2.0 Arrays and HT Rat Focus Array Plates (pdf, 1.0 MB)

Frequently Asked Questions

Gene Expression Arrays

Rat Genome 230 2.0 Array

Library Files

Rat Genome 230 2.0 Array (zip, 17 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

3' IVT PLUS Reagent Kit User Manual (pdf, 2 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf, 8.41 MB)

Mask Files

Rat Genome 230 2.0 Array Normalization Controls (zip, 1 KB)

Package Inserts

Rat Genome 230 2.0 Array (pdf, 470 KB)

Technical Notes

GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Rat230_2 Alignments To Genome, PSL Format (3.0 MB, 11/17/06)

Rat230_2 BED File (986 KB, 1/23/14)

Current NetAffx Annotation Files

Rat230_2 Annotations, CSV format, Release 36 (13 MB, 4/13/16)

Rat230_2 Orthologs/Homologs, CSV Format, Release 36 (9.7 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Rat230-20 Consensus Sequences, FASTA (10 MB, 8/20/08)

Rat230-20 Control Sequences, FASTA (17 KB, 3/1/04)

Rat230_2 Probe Sequences, FASTA (5.7 MB, 8/20/08)

Rat230_2 Probe Sequences, Tabular (5.5 MB, 8/20/08)

Rat230-20 Target Sequences, FASTA (5.8 MB, 8/20/08)

Archived NetAffx Alignment Files

Rat230_2 Alignments to Genome, PSL (3.0 MB, 10/4/04)

Archived NetAffx Annotation Files

Rat230_2 Annotations, BLASTP, Release 20 (2.2 MB, 7/14/06)

Rat230_2 Annotations, BLASTX, Release 20 (1.2 MB, 6/23/04)

Rat230_2 Annotations, CSV format, Release 21 (8.5 MB, 5/31/07)

Rat230_2 Annotations, CSV format, Release 22 (8.9 MB, 5/31/07)

Rat230_2 Annotations, CSV format, Release 23 (8.8 MB, 7/12/07)

Rat230_2 Annotations, CSV format, Release 24 (8.5 MB, 11/6/07)

Rat230_2 Annotations, CSV format, Release 25 (8.3 MB, 3/18/08)

Rat230_2 Annotations, CSV format, Release 26 (8.7 MB, 7/8/08)

Rat230_2 Annotations, CSV format, Release 27 (8.6 MB, 11/30/08)

Rat230_2 Annotations, CSV format, Release 28 (8.6 MB, 3/12/09)

Rat230_2 Annotations, CSV format, Release 29 (8.8 MB, 7/1/09)

Rat230_2 Annotations, CSV format, Release 30 (9.1 MB, 11/15/09)

Rat230_2 Annotations, CSV format, Release 31 (9.4 MB, 8/11/10)

Rat230_2 Annotations, CSV format, Release 32 (9.3 MB, 6/9/11)

Rat230_2 Annotations, CSV format, Release 33 (10 MB, 10/30/12)

Rat230_2 Annotations, CSV format, Release 34 (10 MB, 1/23/14)

Rat230_2 Annotations, CSV format, Release 35 (11 MB, 10/7/14)

Rat230_2 Annotations, CSV, Release 20 (8.1 MB, 5/31/07)

Rat230_2 Annotations, MAGE-ML XML format, Release 21 (43 MB, 6/15/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 22 (41 MB, 6/15/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 23 (39 MB, 7/12/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 24 (37 MB, 11/6/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 25 (37 MB, 3/18/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 26 (39 MB, 7/8/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 27 (42 MB, 11/24/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 28 (40 MB, 3/12/09)

Rat230_2 Annotations, MAGE-ML XML Format, Release 29 (41 MB, 7/1/09)

Rat230_2 Annotations, MAGE-ML XML Format, Release 30 (42 MB, 11/15/09)

Rat230_2 Annotations, MAGE-ML XML Format, Release 31 (43 MB, 8/11/10)

Rat230_2 Annotations, MAGE-ML XML Format, Release 32 (42 MB, 6/9/11)

Rat230_2 Annotations, MAGE-ML XML, Release 20 (41 MB, 6/15/07)

Rat230_2 Annotations, Orthologs, Release 20 (5.4 MB, 8/21/06)

Rat230_2 BLASTP annotations, CSV format, Release 21 (2.6 MB, 11/15/06)

Rat230_2 BLASTP annotations, CSV Format, Release 22 (84 KB, 3/9/07)

Rat230_2 BLASTP annotations, CSV Format, Release 23 (132 KB, 7/12/07)

Rat230_2 BLASTP annotations, CSV Format, Release 24 (2.0 KB, 11/6/07)

Rat230_2 BLASTP annotations, CSV Format, Release 25 (977 B, 3/18/08)

Rat230_2 BLASTP annotations, CSV Format, Release 26 (5.0 KB, 7/8/08)

Rat230_2 BLASTP annotations, CSV Format, Release 27 (80 KB, 11/24/08)

Rat230_2 BLASTP annotations, CSV Format, Release 28 (1.6 KB, 3/4/09)

Rat230_2 BLASTP annotations, CSV Format, Release 29 (54 KB, 7/1/09)

Rat230_2 BLASTP annotations, CSV Format, Release 30 (54 KB, 11/16/09)

Rat230_2 BLASTP annotations, CSV Format, Release 31 (59 KB, 8/11/10)

Rat230_2 Orthologs/Homologs, CSV format, Release 21 (6.1 MB, 11/30/06)

Rat230_2 Orthologs/Homologs, CSV Format, Release 22 (6.6 MB, 3/9/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 23 (5.9 MB, 7/12/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 24 (5.0 MB, 11/6/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 25 (5.1 MB, 3/18/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 26 (5.7 MB, 7/8/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 27 (6.6 MB, 11/24/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 28 (6.3 MB, 3/12/09)

Rat230_2 Orthologs/Homologs, CSV Format, Release 29 (6.2 MB, 7/1/09)

Rat230_2 Orthologs/Homologs, CSV Format, Release 30 (6.4 MB, 11/15/09)

Rat230_2 Orthologs/Homologs, CSV Format, Release 31 (6.4 MB, 8/11/10)

Rat230_2 Orthologs/Homologs, CSV Format, Release 32 (6.2 MB, 6/9/11)

Rat230_2 Orthologs/Homologs, CSV Format, Release 33 (7.7 MB, 10/30/12)

Rat230_2 Orthologs/Homologs, CSV Format, Release 34 (8.0 MB, 1/23/14)

Rat230_2 Orthologs/Homologs, CSV Format, Release 35 (9.0 MB, 4/16/15)