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Rat Genome 230 2.0 Array - Support Materials

For more information, please see the product page.

Data Sheets

GeneChip 3' IVT Array Data Sheet, Human, Mouse, Rat (pdf, 9.05MB)-Japanese Version

Rat Genome 230 2.0 Array (pdf, 106 KB) - Japanese Version

Rat Genome 230 2.0 Arrays and HT Rat Focus Array Plates (pdf, 1.0 MB)

Frequently Asked Questions

Gene Expression Arrays

Rat Genome 230 2.0 Array

Library Files

Rat Genome 230 2.0 Array (zip, 17 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf 8.41 MB)

Probe Set Data in MAGE-ML Format

Mask Files

Rat Genome 230 2.0 Array Normalization Controls (zip, 1 KB)

Package Inserts

Rat Genome 230 2.0 Array (pdf, 470 KB)

Technical Notes

GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Rat230_2 Alignments To Genome, PSL Format (3.0 MB, 11/17/06)

Current NetAffx Annotation Files

Rat230_2 Annotations, CSV format, Release 30 (9.1 MB, 11/15/09)

Rat230_2 Annotations, MAGE-ML XML Format, Release 30 (42 MB, 11/15/09)

Rat230_2 BLASTP annotations, CSV Format, Release 30 (54 KB, 11/16/09)

Rat230_2 Orthologs/Homologs, CSV Format, Release 30 (6.4 MB, 11/15/09)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Rat230-20 Consensus Sequences, FASTA (10 MB, 8/20/08)

Rat230-20 Control Sequences, FASTA (17 KB, 3/1/04)

Rat230_2 Probe Sequences, FASTA (5.7 MB, 8/20/08)

Rat230_2 Probe Sequences, Tabular (5.5 MB, 8/20/08)

Rat230-20 Target Sequences, FASTA (5.8 MB, 8/20/08)

Archived NetAffx Alignment Files

Rat230_2 Alignments to Genome, PSL (3.0 MB, 10/4/04)

Archived NetAffx Annotation Files

Rat230_2 Annotations, BLASTP, Release 20 (2.2 MB, 7/14/06)

Rat230_2 Annotations, BLASTX, Release 20 (1.2 MB, 6/23/04)

Rat230_2 Annotations, CSV format, Release 21 (8.5 MB, 5/31/07)

Rat230_2 Annotations, CSV format, Release 22 (8.9 MB, 5/31/07)

Rat230_2 Annotations, CSV format, Release 23 (8.8 MB, 7/12/07)

Rat230_2 Annotations, CSV format, Release 24 (8.5 MB, 11/6/07)

Rat230_2 Annotations, CSV format, Release 25 (8.3 MB, 3/18/08)

Rat230_2 Annotations, CSV format, Release 26 (8.7 MB, 7/8/08)

Rat230_2 Annotations, CSV format, Release 27 (8.6 MB, 11/30/08)

Rat230_2 Annotations, CSV format, Release 28 (8.6 MB, 3/12/09)

Rat230_2 Annotations, CSV format, Release 29 (8.8 MB, 7/1/09)

Rat230_2 Annotations, CSV, Release 20 (8.1 MB, 5/31/07)

Rat230_2 Annotations, MAGE-ML XML format, Release 21 (43 MB, 6/15/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 22 (41 MB, 6/15/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 23 (39 MB, 7/12/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 24 (37 MB, 11/6/07)

Rat230_2 Annotations, MAGE-ML XML Format, Release 25 (37 MB, 3/18/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 26 (39 MB, 7/8/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 27 (42 MB, 11/24/08)

Rat230_2 Annotations, MAGE-ML XML Format, Release 28 (40 MB, 3/12/09)

Rat230_2 Annotations, MAGE-ML XML Format, Release 29 (41 MB, 7/1/09)

Rat230_2 Annotations, MAGE-ML XML, Release 20 (41 MB, 6/15/07)

Rat230_2 Annotations, Orthologs, Release 20 (5.4 MB, 8/21/06)

Rat230_2 BLASTP annotations, CSV format, Release 21 (2.6 MB, 11/15/06)

Rat230_2 BLASTP annotations, CSV Format, Release 22 (84 KB, 3/9/07)

Rat230_2 BLASTP annotations, CSV Format, Release 23 (132 KB, 7/12/07)

Rat230_2 BLASTP annotations, CSV Format, Release 24 (2.0 KB, 11/6/07)

Rat230_2 BLASTP annotations, CSV Format, Release 25 (977 B, 3/18/08)

Rat230_2 BLASTP annotations, CSV Format, Release 26 (5.0 KB, 7/8/08)

Rat230_2 BLASTP annotations, CSV Format, Release 27 (80 KB, 11/24/08)

Rat230_2 BLASTP annotations, CSV Format, Release 28 (1.6 KB, 3/4/09)

Rat230_2 BLASTP annotations, CSV Format, Release 29 (54 KB, 7/1/09)

Rat230_2 Orthologs/Homologs, CSV format, Release 21 (6.1 MB, 11/30/06)

Rat230_2 Orthologs/Homologs, CSV Format, Release 22 (6.6 MB, 3/9/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 23 (5.9 MB, 7/12/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 24 (5.0 MB, 11/6/07)

Rat230_2 Orthologs/Homologs, CSV Format, Release 25 (5.1 MB, 3/18/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 26 (5.7 MB, 7/8/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 27 (6.6 MB, 11/24/08)

Rat230_2 Orthologs/Homologs, CSV Format, Release 28 (6.3 MB, 3/12/09)

Rat230_2 Orthologs/Homologs, CSV Format, Release 29 (6.2 MB, 7/1/09)