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Rat Expression Set 230 - Support Materials

For more information, please see the product page.

Array Comparisons

Canine to RAE230, All (zip, 224 KB)

Canine to RAE230, Best Match (zip, 5 KB)

Canine to RAE230, Good Match (zip, 5 KB)

Canine to RAE230, No Match (zip, 42 KB)

Rat 230 to HG-U133 Plus, Best Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, Complex (zip, 225 KB)

Rat 230 to HG-U133 Plus, Good Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, No Match (zip, 79 KB)

Rat 230 to MGU74v2, Best Match (zip, 70 KB)

Rat 230 to MGU74v2, Complex (zip, 41 MB)

Rat 230 to MGU74v2, Good Match (zip, 72 KB)

Rat 230 to MGU74v2, No match (zip, 1 KB)

Rat 230 to Mouse 430, Best Match (zip, 103 KB)

Rat 230 to Mouse 430, Complex (zip, 25 MB)

Rat 230 to Mouse 430, Good Match (zip, 108 KB)

Rat 230 to Mouse 430, No Match (zip, 1KB)

Rat 230 to Rat Exon 1.0 ST, Best Match (zip, 570 KB)

Rat 230 to Rat Exon 1.0 ST, Complex Match (zip, 1.6 MB)

Rat 230 to Rat Exon 1.0 ST, Good Match (zip, 606 KB)

Rat 230 to Rat Exon 1.0 ST, No Match (zip, 720 KB)

Rat 230 to Rat Gene 1.0 ST, Best Match (zip, 272 KB)

Rat 230 to Rat Gene 1.0 ST, Complex Match (zip, 525 KB)

Rat 230 to Rat Gene 1.0 ST, Good Match (zip, 317 KB)

Rat 230 to Rat Gene 1.0 ST, No Match (zip, 39 KB)

RGU34 to Rat 230, Best Match (zip, 417 KB)

RGU34 to Rat 230, Complex (zip, 16 MB)

RGU34 to Rat 230, Good Match (zip, 425 KB)

RGU34 to Rat 230, No Match (zip, 1 KB)

RNU34 to Rat 230, Best Match (zip, 21 KB)

RNU34 to Rat 230, Complex (zip, 909 KB)

RNU34 to Rat 230, Good Match (zip, 23 KB)

RNU34 to Rat 230, No Match (zip, 1 KB)

RTU34 to Rat 230, Best Match (zip, 16 KB)

RTU34 to Rat 230, Complex (zip, 583 KB)

RTU34 to Rat 230, Good Match (zip, 18 KB)

RTU34 to Rat 230, No Match (zip, 1 KB)

Data Sheets

Rat Expression Set 230 (pdf, 372 KB)

Frequently Asked Questions

Gene Expression Arrays

Rat Expression Set 230

Library Files

Rat Expression Set 230 (zip, 16 MB)

Manuals

3' IVT PLUS Reagent Kit User Manual (pdf, 2 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Mask Files

Rat Expression Set 230A Normalization Controls (zip, 1 KB)

Rat Expression Set 230B Normalization Controls (zip, 1 KB)

Package Inserts

Rat Expression Set 230 (pdf, 495 KB)

Technical Notes

Array Design and Performance of the GeneChip® Rat Expression Set 230 (pdf, 554 KB)

Manufacturing Quality Control and Validation Studies of GeneChip® Arrays (pdf, 3.28 MB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

RAE230A Alignments To Genome, PSL Format (1.9 MB, 11/17/06)

RAE230B Alignments To Genome, PSL Format (1.1 MB, 11/17/06)

RAE230A BED File (641 KB, 1/23/14)

RAE230B BED File (350 KB, 1/23/14)

Current NetAffx Annotation Files

RAE230A Annotations, CSV format, Release 36 (8.4 MB, 4/13/16)

RAE230B Annotations, CSV format, Release 36 (5.1 MB, 4/13/16)

RAE230A Orthologs/Homologs, CSV Format, Release 36 (6.0 MB, 4/13/16)

RAE230B Orthologs/Homologs, CSV Format, Release 36 (3.7 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

RAE230A Consensus Sequences, FASTA (6.9 MB, 8/20/08)

RAE230B Consensus Sequences, FASTA (3.4 MB, 8/20/08)

RAE230A Control Sequences, FASTA (17 KB, 3/28/03)

RAE230B Control Sequences, FASTA (17 KB, 3/28/03)

RAE230A Probe Sequences, FASTA (3.1 MB, 8/20/08)

RAE230B Probe Sequences, FASTA (2.9 MB, 8/20/08)

RAE230A Probe Sequences, Tabular (2.8 MB, 8/20/08)

RAE230B Probe Sequences, Tabular (2.6 MB, 8/20/08)

RAE230A Target Sequences, FASTA (3.2 MB, 8/20/08)

RAE230B Target Sequences, FASTA (2.6 MB, 8/20/08)

Archived NetAffx Alignment Files

RAE230A Alignments to Genome, PSL (1.9 MB, 10/4/04)

RAE230B Alignments to Genome, PSL (1.1 MB, 10/4/04)

Archived NetAffx Annotation Files

RAE230A Annotations, BLASTP, Release 20 (1.6 MB, 7/14/06)

RAE230B Annotations, BLASTP, Release 20 (647 KB, 7/14/06)

RAE230A Annotations, BLASTX, Release 20 (979 KB, 6/23/04)

RAE230B Annotations, BLASTX, Release 20 (291 KB, 6/23/04)

RAE230A Annotations, CSV format, Release 21 (5.1 MB, 5/31/07)

RAE230B Annotations, CSV format, Release 21 (3.5 MB, 5/31/07)

RAE230A Annotations, CSV format, Release 22 (5.4 MB, 5/31/07)

RAE230B Annotations, CSV format, Release 22 (3.6 MB, 5/31/07)

RAE230A Annotations, CSV format, Release 23 (5.3 MB, 7/12/07)

RAE230B Annotations, CSV format, Release 23 (3.6 MB, 7/12/07)

RAE230A Annotations, CSV format, Release 24 (5.3 MB, 11/6/07)

RAE230B Annotations, CSV format, Release 24 (3.3 MB, 11/6/07)

RAE230A Annotations, CSV format, Release 25 (5.1 MB, 3/18/08)

RAE230B Annotations, CSV format, Release 25 (3.2 MB, 3/18/08)

RAE230A Annotations, CSV format, Release 26 (5.4 MB, 7/8/08)

RAE230B Annotations, CSV format, Release 26 (3.3 MB, 7/8/08)

RAE230A Annotations, CSV format, Release 27 (5.4 MB, 11/30/08)

RAE230B Annotations, CSV format, Release 27 (3.3 MB, 11/30/08)

RAE230A Annotations, CSV format, Release 28 (5.3 MB, 3/12/09)

RAE230B Annotations, CSV format, Release 28 (3.3 MB, 3/12/09)

RAE230A Annotations, CSV format, Release 29 (5.6 MB, 7/1/09)

RAE230B Annotations, CSV format, Release 29 (3.3 MB, 7/1/09)

RAE230A Annotations, CSV format, Release 30 (5.7 MB, 11/15/09)

RAE230B Annotations, CSV format, Release 30 (3.4 MB, 11/15/09)

RAE230A Annotations, CSV format, Release 31 (6.0 MB, 8/11/10)

RAE230B Annotations, CSV format, Release 31 (3.5 MB, 8/11/10)

RAE230A Annotations, CSV format, Release 32 (5.9 MB, 6/9/11)

RAE230B Annotations, CSV format, Release 32 (3.5 MB, 6/9/11)

RAE230A Annotations, CSV format, Release 33 (6.8 MB, 10/30/12)

RAE230B Annotations, CSV format, Release 33 (3.9 MB, 10/30/12)

RAE230A Annotations, CSV format, Release 34 (6.9 MB, 1/23/14)

RAE230B Annotations, CSV format, Release 34 (3.9 MB, 1/23/14)

RAE230A Annotations, CSV format, Release 35 (7.4 MB, 10/7/14)

RAE230B Annotations, CSV format, Release 35 (4.3 MB, 10/7/14)

RAE230A Annotations, CSV, Release 20 (4.9 MB, 5/31/07)

RAE230B Annotations, CSV, Release 20 (3.2 MB, 5/31/07)

RAE230A Annotations, MAGE-ML XML format, Release 21 (26 MB, 6/15/07)

RAE230B Annotations, MAGE-ML XML format, Release 21 (17 MB, 6/15/07)

RAE230A Annotations, MAGE-ML XML Format, Release 22 (24 MB, 6/15/07)

RAE230B Annotations, MAGE-ML XML Format, Release 22 (16 MB, 6/15/07)

RAE230A Annotations, MAGE-ML XML Format, Release 23 (23 MB, 7/12/07)

RAE230B Annotations, MAGE-ML XML Format, Release 23 (16 MB, 7/12/07)

RAE230A Annotations, MAGE-ML XML Format, Release 24 (23 MB, 11/6/07)

RAE230B Annotations, MAGE-ML XML Format, Release 24 (14 MB, 11/6/07)

RAE230A Annotations, MAGE-ML XML Format, Release 25 (23 MB, 3/18/08)

RAE230B Annotations, MAGE-ML XML Format, Release 25 (14 MB, 3/18/08)

RAE230A Annotations, MAGE-ML XML Format, Release 26 (24 MB, 7/8/08)

RAE230B Annotations, MAGE-ML XML Format, Release 26 (15 MB, 7/8/08)

RAE230A Annotations, MAGE-ML XML Format, Release 27 (24 MB, 11/24/08)

RAE230B Annotations, MAGE-ML XML Format, Release 27 (15 MB, 11/24/08)

RAE230A Annotations, MAGE-ML XML Format, Release 28 (25 MB, 3/12/09)

RAE230B Annotations, MAGE-ML XML Format, Release 28 (15 MB, 3/12/09)

RAE230A Annotations, MAGE-ML XML Format, Release 29 (25 MB, 7/1/09)

RAE230B Annotations, MAGE-ML XML Format, Release 29 (15 MB, 7/1/09)

RAE230A Annotations, MAGE-ML XML Format, Release 30 (26 MB, 11/15/09)

RAE230B Annotations, MAGE-ML XML Format, Release 30 (16 MB, 11/15/09)

RAE230A Annotations, MAGE-ML XML Format, Release 31 (26 MB, 8/11/10)

RAE230B Annotations, MAGE-ML XML Format, Release 31 (16 MB, 8/11/10)

RAE230A Annotations, MAGE-ML XML Format, Release 32 (26 MB, 6/9/11)

RAE230B Annotations, MAGE-ML XML Format, Release 32 (16 MB, 6/9/11)

RAE230A Annotations, MAGE-ML XML, Release 20 (25 MB, 6/15/07)

RAE230B Annotations, MAGE-ML XML, Release 20 (16 MB, 6/15/07)

RAE230A Annotations, Orthologs, Release 20 (3.3 MB, 8/21/06)

RAE230B Annotations, Orthologs, Release 20 (2.2 MB, 8/21/06)

RAE230A BLASTP annotations, CSV format, Release 21 (1.8 MB, 11/15/06)

RAE230B BLASTP annotations, CSV format, Release 21 (812 KB, 11/15/06)

RAE230A BLASTP annotations, CSV Format, Release 22 (38 KB, 3/9/07)

RAE230B BLASTP annotations, CSV Format, Release 22 (46 KB, 3/9/07)

RAE230A BLASTP annotations, CSV Format, Release 23 (58 KB, 7/12/07)

RAE230B BLASTP annotations, CSV Format, Release 23 (74 KB, 7/12/07)

RAE230A BLASTP annotations, CSV Format, Release 24 (1.7 KB, 11/6/07)

RAE230B BLASTP annotations, CSV Format, Release 24 (583 B, 11/6/07)

RAE230A BLASTP annotations, CSV Format, Release 25 (973 B, 3/18/08)

RAE230A BLASTP annotations, CSV Format, Release 26 (3.5 KB, 7/8/08)

RAE230B BLASTP annotations, CSV Format, Release 26 (2.3 KB, 7/8/08)

RAE230A BLASTP annotations, CSV Format, Release 27 (35 KB, 11/24/08)

RAE230B BLASTP annotations, CSV Format, Release 27 (45 KB, 11/24/08)

RAE230A BLASTP annotations, CSV Format, Release 28 (1.6 KB, 3/4/09)

RAE230A BLASTP annotations, CSV Format, Release 29 (23 KB, 7/1/09)

RAE230B BLASTP annotations, CSV Format, Release 29 (31 KB, 7/1/09)

RAE230A BLASTP annotations, CSV Format, Release 30 (23 KB, 11/16/09)

RAE230B BLASTP annotations, CSV Format, Release 30 (32 KB, 11/16/09)

RAE230A BLASTP annotations, CSV Format, Release 31 (24 KB, 8/11/10)

RAE230B BLASTP annotations, CSV Format, Release 31 (36 KB, 8/11/10)

RAE230A Orthologs/Homologs, CSV format, Release 21 (3.5 MB, 11/30/06)

RAE230B Orthologs/Homologs, CSV format, Release 21 (2.5 MB, 11/30/06)

RAE230A Orthologs/Homologs, CSV Format, Release 22 (3.9 MB, 3/9/07)

RAE230B Orthologs/Homologs, CSV Format, Release 22 (2.8 MB, 3/9/07)

RAE230A Orthologs/Homologs, CSV Format, Release 23 (3.6 MB, 7/12/07)

RAE230B Orthologs/Homologs, CSV Format, Release 23 (2.4 MB, 7/12/07)

RAE230A Orthologs/Homologs, CSV Format, Release 24 (3.3 MB, 11/6/07)

RAE230B Orthologs/Homologs, CSV Format, Release 24 (1.7 MB, 11/6/07)

RAE230A Orthologs/Homologs, CSV Format, Release 25 (3.4 MB, 3/18/08)

RAE230B Orthologs/Homologs, CSV Format, Release 25 (1.8 MB, 3/18/08)

RAE230A Orthologs/Homologs, CSV Format, Release 26 (3.8 MB, 7/8/08)

RAE230B Orthologs/Homologs, CSV Format, Release 26 (1.9 MB, 7/8/08)

RAE230A Orthologs/Homologs, CSV Format, Release 27 (3.8 MB, 11/24/08)

RAE230B Orthologs/Homologs, CSV Format, Release 27 (2.1 MB, 11/24/08)

RAE230A Orthologs/Homologs, CSV Format, Release 28 (4.1 MB, 3/12/09)

RAE230B Orthologs/Homologs, CSV Format, Release 28 (2.2 MB, 3/12/09)

RAE230A Orthologs/Homologs, CSV Format, Release 29 (4.0 MB, 7/1/09)

RAE230B Orthologs/Homologs, CSV Format, Release 29 (2.2 MB, 7/1/09)

RAE230A Orthologs/Homologs, CSV Format, Release 30 (4.2 MB, 11/15/09)

RAE230B Orthologs/Homologs, CSV Format, Release 30 (2.3 MB, 11/15/09)

RAE230A Orthologs/Homologs, CSV Format, Release 31 (4.2 MB, 8/11/10)

RAE230B Orthologs/Homologs, CSV Format, Release 31 (2.2 MB, 8/11/10)

RAE230A Orthologs/Homologs, CSV Format, Release 32 (4.1 MB, 6/9/11)

RAE230B Orthologs/Homologs, CSV Format, Release 32 (2.2 MB, 6/9/11)

RAE230A Orthologs/Homologs, CSV Format, Release 33 (5.0 MB, 10/30/12)

RAE230B Orthologs/Homologs, CSV Format, Release 33 (2.7 MB, 10/30/12)

RAE230A Orthologs/Homologs, CSV Format, Release 34 (5.2 MB, 1/23/14)

RAE230B Orthologs/Homologs, CSV Format, Release 34 (2.8 MB, 1/23/14)

RAE230A Orthologs/Homologs, CSV Format, Release 35 (5.7 MB, 10/7/14)

RAE230B Orthologs/Homologs, CSV Format, Release 35 (3.2 MB, 4/16/15)