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Mouse Genome 430 2.0 Array - Support Materials

For more information, please see the product page.

Array Comparisons

Mouse 430 to Mouse Exon 1.0 ST, Complex Match (zip, 5.9 MB)

Mouse 430 to Mouse Exon 1.0 ST, Good Match (zip, 1.1 MB)

Mouse 430 to Mouse Exon 1.0 ST, No Match (zip, 515 KB)

Data Sheets

GeneChip 3' IVT Array Data Sheet, Human, Mouse, Rat (pdf, 9.05MB)-Japanese Version

GeneChip® Mouse Genome Arrays (pdf, 235 KB)

Frequently Asked Questions

Gene Expression Arrays

Mouse Genome 430 2.0 Arrays

Library Files

Mouse Genome 430 2.0 Array (zip, 25 MB)

Manuals

3' IVT PLUS Reagent Kit User Manual (pdf, 2 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Mask Files

Mouse Genome 430 2.0 Array Normalization Controls (zip, 1 KB)

Package Inserts

Mouse Genome 430 2.0 Array (pdf, 472 KB)

Technical Notes

GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Mouse430_2 Alignments to Genome, PSL (5.7 MB, 4/18/08)

Mouse430_2 BED File (2.2 MB, 1/23/14)

Current NetAffx Annotation Files

Mouse430_2 Annotations, CSV format, Release 35 (23 MB, 10/7/14)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 35 (13 MB, 10/7/14)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Mouse430_2 Consensus Sequences, FASTA (24 MB, 8/20/08)

Mouse430_2 Control Sequences, FASTA (20 KB, 12/9/03)

Mouse430_2 Probe Sequences, FASTA (8.8 MB, 8/20/08)

Mouse430_2 Probe Sequences, Tabular (8.0 MB, 8/20/08)

Mouse430_2 Target Sequences, FASTA (8.9 MB, 8/20/08)

Archived NetAffx Annotation Files

Mouse430_2 Annotations, BLASTP, Release 20 (3.9 MB, 7/14/06)

Mouse430_2 Annotations, BLASTX, Release 20 (1.2 MB, 6/23/04)

Mouse430_2 Annotations, CSV format, Release 21 (14 MB, 5/31/07)

Mouse430_2 Annotations, CSV format, Release 22 (15 MB, 5/31/07)

Mouse430_2 Annotations, CSV format, Release 23 (14 MB, 7/12/07)

Mouse430_2 Annotations, CSV format, Release 24 (13 MB, 11/6/07)

Mouse430_2 Annotations, CSV format, Release 25 (13 MB, 3/19/08)

Mouse430_2 Annotations, CSV format, Release 26 (15 MB, 7/8/08)

Mouse430_2 Annotations, CSV format, Release 27 (14 MB, 11/30/08)

Mouse430_2 Annotations, CSV format, Release 28 (15 MB, 3/12/09)

Mouse430_2 Annotations, CSV format, Release 29 (15 MB, 7/1/09)

Mouse430_2 Annotations, CSV format, Release 30 (15 MB, 11/15/09)

Mouse430_2 Annotations, CSV format, Release 31 (16 MB, 8/11/10)

Mouse430_2 Annotations, CSV format, Release 32 (16 MB, 6/9/11)

Mouse430_2 Annotations, CSV format, Release 33 (19 MB, 11/2/12)

Mouse430_2 Annotations, CSV format, Release 34 (21 MB, 1/23/14)

Mouse430_2 Annotations, CSV, Release 20 (14 MB, 5/31/07)

Mouse430_2 Annotations, MAGE-ML XML format, Release 21 (76 MB, 6/15/07)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 22 (72 MB, 6/15/07)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 23 (68 MB, 7/12/07)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 24 (66 MB, 11/6/07)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 25 (67 MB, 3/19/08)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 26 (70 MB, 7/8/08)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 27 (76 MB, 11/24/08)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 28 (72 MB, 3/12/09)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 29 (73 MB, 7/1/09)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 30 (76 MB, 11/15/09)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 31 (77 MB, 8/11/10)

Mouse430_2 Annotations, MAGE-ML XML Format, Release 32 (78 MB, 6/9/11)

Mouse430_2 Annotations, MAGE-ML XML, Release 20 (75 MB, 6/15/07)

Mouse430_2 Annotations, Orthologs, Release 20 (8.8 MB, 8/21/06)

Mouse430_2 BLASTP annotations, CSV format, Release 21 (3.9 MB, 11/15/06)

Mouse430_2 BLASTP annotations, CSV Format, Release 22 (77 KB, 3/9/07)

Mouse430_2 BLASTP annotations, CSV Format, Release 23 (64 KB, 7/12/07)

Mouse430_2 BLASTP annotations, CSV Format, Release 24 (1.2 KB, 11/6/07)

Mouse430_2 BLASTP annotations, CSV Format, Release 25 (28 KB, 3/18/08)

Mouse430_2 BLASTP annotations, CSV Format, Release 26 (4.0 KB, 7/8/08)

Mouse430_2 BLASTP annotations, CSV Format, Release 27 (30 KB, 11/24/08)

Mouse430_2 BLASTP annotations, CSV Format, Release 28 (4.6 KB, 3/4/09)

Mouse430_2 BLASTP annotations, CSV Format, Release 31 (1.0 KB, 8/11/10)

Mouse430_2 Orthologs/Homologs, CSV format, Release 21 (8.5 MB, 11/30/06)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 22 (9.3 MB, 3/9/07)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 23 (8.6 MB, 7/12/07)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 24 (7.7 MB, 11/6/07)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 25 (7.8 MB, 3/18/08)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 26 (8.3 MB, 7/8/08)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 27 (9.8 MB, 11/24/08)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 28 (9.2 MB, 3/12/09)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 29 (8.9 MB, 7/1/09)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 30 (9.7 MB, 11/15/09)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 31 (9.7 MB, 8/11/10)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 32 (9.7 MB, 6/9/11)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 33 (12 MB, 10/30/12)

Mouse430_2 Orthologs/Homologs, CSV Format, Release 34 (12 MB, 1/23/14)