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Mouse Transcriptome Assay 1.0 - Support Materials

For more information, please see the product page.

Brochure

Clariom™ assays Brochure (pdf, 1.91 MB)

Expression Microarray Reagent Guide (pdf, 244 KB)

Data Sheets

Clariom™ D solutions

Clariom™ D HMR Datasheet - Japanese version (pdf, 324KB)

Frequently Asked Questions

GeneChip® human, mouse, and rat transcriptome assays (pdf, 105 KB)

Library Files

Clariom™ D Array, mouse AGCC Library File Installer (zip, 104 KB)

Clariom™ D Array, mouse Exon CDF Library File (zip, 104 MB)

Clariom™ D Array, mouse Gene CDF Library File (zip, 84 MB)

Clariom™ D Array, mouse Main Analysis Files, r3 (zip, 138 MB)

Clariom™ D Array, mouse TAC Analysis Files (zip, 39 MB)

Clariom™ D Array, mouse TAC Configuration File (zip, 902 B)

Manuals

Expression Console™ Software (pdf, 6 MB)

Expression Wash, Stain and Scan User Manual for Cartridge Arrays (pdf, 2.52 MB)

GeneChip® High Throughput WT PLUS Kit (pdf, 10 MB)

Sample Attribute Editor (pdf, 597 KB)

SensationPlus™ FFPE Amplification and WT Labeling Kit (pdf, 391 KB)

Transcriptome Analysis Console (pdf, 7 MB)

WT Pico Kit User Guide (pdf, 1.8 MB)

WT PLUS Reagent Kit User Manual (pdf, 2 MB)

Package Inserts

Package Insert (pdf, 153 KB)

Quick Reference Cards

Expression Console Quick Reference Card (pdf, 1.13 MB)

Sample Data

Mouse Embryonic miRNA 4.0 Sample Data CEL Files (zip, 12 MB)

Mouse Embryonic MTA 1.0 Sample Data CEL Files (zip, 415 MB)

Mouse Tissue Panel miRNA 4.0 Sample Data CEL Files (zip, 9 MB)

Mouse Tissue Panel MTA 1.0 Sample Data CEL Files (zip, 305 MB)

MTA and miRNA 4.0 Embryonic Sample TAC Files (zip, 80 MB)

MTA and miRNA 4.0 Tissue Panel TAC Files (zip, 50 MB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

Clariom™ D Array, mouse BED File (75 MB, 5/18/15)

Current NetAffx Annotation Files

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 36 (39 MB, 7/6/16)

Clariom™ D Array, mouse Transcript Cluster Annotations, CSV, Release 36 (39 MB, 7/6/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Clariom™ D Array, mouse Probe Sequences, FASTA format (119 MB, 9/3/14)

Clariom™ D Array, mouse Probe Sequences, tabular format (111 MB, 9/3/14)

Archived NetAffx Annotation Files

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 34.1 (33 MB, 7/18/14)

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 35 (37 MB, 6/23/14)

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 35 (32 MB, 4/15/15)

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 35.1 (36 MB, 11/20/15)

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 35.2 (36 MB, 1/22/16)

Clariom™ D Array, mouse Probeset Annotations, CSV Format, Release 35.3 (38 MB, 2/17/16)

Clariom™ D Array, mouse Transcript Cluster Annotations, CSV, Release 34.1 (27 MB, 7/18/14)

Clariom™ D Array, mouse Transcript Cluster Annotations, CSV, Release 35 (6.8 MB, 6/23/14)

Clariom™ D Array, mouse Transcript Cluster Annotations, CSV, Release 35 (36 MB, 4/15/15)

Clariom™ D Array, mouse Transcript Cluster Annotations, CSV, Release 35.1 (36 MB, 11/20/15)

Archived Library Files

Clariom™ D Array, mouse Main Analysis Files, r1 (zip, 136 MB)

Clariom™ D Array, mouse Main Analysis Files, r2 (zip, 138 MB)