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Human Transcriptome Array 2.0 - Support Materials

For more information, please see the product page.

Brochure

Expression Microarray Reagent Guide (pdf, 244 KB)

Immuno-oncology Brochure (pdf, 1.70 MB)

Data Sheets

Clariom™ D HMR Datasheet - Japanese version (pdf, 324KB)

GeneChip® Human Transcriptome Array 2.0 (pdf, 107 KB)

Human Transcriptome Array 2.0 Datasheet (pdf, 230KB) - Japanese version -

Frequently Asked Questions

GeneChip® human, mouse, and rat transcriptome assays (pdf, 105 KB)

Library Files

GeneChip® Human Transcriptome Array 2.0 AGCC Library File Installer (zip, 109 KB)

GeneChip® Human Transcriptome Array 2.0 Main Analysis Files, r3 (zip, 160 MB)

GeneChip® Human Transcriptome Array 2.0 TAC Analysis Files (zip, 114 MB)

GeneChip® Human Transcriptome Array 2.0 TAC Configuration File (zip, 1.1 KB)

Uncharacterized Annotation File (zip, 86 KB)

Unsupported HTA 2.0 CDF files for exon-level analysis (zip, 126 MB)

Unsupported HTA 2.0 CDF files for gene-level analysis (zip, 103 MB)

Manuals

Expression Console™ Software (pdf, 6 MB)

Expression Wash, Stain and Scan User Manual for Cartridge Arrays (pdf, 2.52 MB)

GeneChip® High Throughput WT PLUS Kit (pdf, 10 MB)

Sample Attribute Editor (pdf, 597 KB)

SensationPlus™ FFPE Amplification and WT Labeling Kit (pdf, 391 KB)

Transcriptome Analysis Console (pdf, 7 MB)

WT Pico Kit User Guide (pdf, 1.8 MB)

WT PLUS Reagent Kit User Manual (pdf, 2 MB)

Package Inserts

Package Insert (pdf, 153 KB)

Quick Reference Cards

Expression Console Quick Reference Card (pdf, 1.13 MB)

Sample Data

WT PLUS HTA 2.0 data on MAQCA and MAQCB samples (zip, 162 MB)

WT PLUS HTA 2.0 data on Tissue Panel samples (zip, 756 MB)

WT PLUS HTA 2.0 data on Whole Blood samples (globin-reduction effects) (zip, 328 MB)

White Papers

Whole Transcript (WT) Sense Target Labeling Assay Performance (pdf, 652 KB)

Additional Support

Fluidics Scripts

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

HTA-2_0 BED File (93 MB, 2/28/14)

Current NetAffx Annotation Files

HTA-2_0 Probeset Annotations, CSV Format, Release 36 (60 MB, 7/6/16)

HTA-2_0 Transcript Cluster Annotations, CSV, Release 36 (54 MB, 7/6/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

HTA-2_0 Probe Sequences, FASTA format (208 MB, 2/18/14)

HTA-2_0 Probe Sequences, tabular format (174 MB, 2/18/14)

Archived NetAffx Annotation Files

HTA-2_0 Probeset Annotations, CSV Format, Release 33 (47 MB, 2/8/13)

HTA-2_0 Probeset Annotations, CSV Format, Release 34 (48 MB, 1/23/14)

HTA-2_0 Probeset Annotations, CSV Format, Release 35 (58 MB, 4/15/15)

HTA-2_0 Probeset Annotations, CSV Format, Release 35.1 (61 MB, 2/17/16)

HTA-2_0 Transcript Cluster Annotations, CSV, Release 33 (21 MB, 2/8/13)

HTA-2_0 Transcript Cluster Annotations, CSV, Release 33.1 (22 MB, 5/1/13)

HTA-2_0 Transcript Cluster Annotations, CSV, Release 34 (32 MB, 1/22/14)

HTA-2_0 Transcript Cluster Annotations, CSV, Release 35.2 (47 MB, 7/22/15)

Archived Library Files

GeneChip® Human Transcriptome Array 2.0 Main Analysis Files, r1 (zip, 303 MB)

GeneChip® Human Transcriptome Array 2.0 Main Analysis Files, r2 (zip, 160 MB)