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HT Rat Focus Array Plate - Support Materials

For more information, please see the product page.

Data Sheets

HT Array Replacement Guideline (pdf, 179 KB)

Rat Genome 230 2.0 Arrays and HT Rat Focus Array Plates (pdf, 1.0 MB)

Frequently Asked Questions

Gene Expression Arrays

Library Files

AGCC 3.x HT Rat-Focus Library Files (zip, 11.9 MB)

HT Rat-Focus Array (zip, 14 MB)

Manuals

Expression Analysis Technical Manual For HT Array Plates Using the GeneChip® Array Station (pdf, 7.4 MB)

White Papers

HT and Cartridge IVT Expression Arrays (pdf, 601 KB)

Performance Evaluation of the GeneChip® HT Array Plate Scanner (pdf, 1.96MB)

Additional Support

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

HT_Rat-Focus BED File (852 KB, 1/23/14)

Current NetAffx Annotation Files

HT_Rat-Focus Annotations, CSV format, Release 36 (11 MB, 4/13/16)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 36 (8.6 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

HT_Rat-Focus Consensus Sequences FASTA Format (8.1 MB, 3/19/07)

HT_Rat-Focus Control Sequences FASTA Format (21 KB, 3/19/07)

HT_Rat-Focus Probe Sequences, FASTA format (4.8 MB, 3/11/09)

HT_Rat-Focus Probe Sequences, tabular format (4.3 MB, 3/11/09)

HT_Rat-Focus Target Sequences FASTA Format (4.7 MB, 3/19/07)

Archived NetAffx Annotation Files

HT_Rat-Focus Annotations, CSV format, Release 21 (7.3 MB, 5/31/07)

HT_Rat-Focus Annotations, CSV format, Release 22 (7.7 MB, 5/31/07)

HT_Rat-Focus Annotations, CSV format, Release 23 (7.6 MB, 7/12/07)

HT_Rat-Focus Annotations, CSV format, Release 24 (7.3 MB, 11/6/07)

HT_Rat-Focus Annotations, CSV format, Release 25 (7.2 MB, 3/18/08)

HT_Rat-Focus Annotations, CSV format, Release 26 (7.5 MB, 7/8/08)

HT_Rat-Focus Annotations, CSV format, Release 27 (7.5 MB, 11/30/08)

HT_Rat-Focus Annotations, CSV format, Release 28 (7.4 MB, 3/12/09)

HT_Rat-Focus Annotations, CSV format, Release 29 (7.7 MB, 7/1/09)

HT_Rat-Focus Annotations, CSV format, Release 30 (7.9 MB, 11/15/09)

HT_Rat-Focus Annotations, CSV format, Release 31 (8.2 MB, 8/11/10)

HT_Rat-Focus Annotations, CSV format, Release 32 (8.2 MB, 6/9/11)

HT_Rat-Focus Annotations, CSV format, Release 33 (9.4 MB, 10/30/12)

HT_Rat-Focus Annotations, CSV format, Release 34 (9.4 MB, 1/23/14)

HT_Rat-Focus Annotations, CSV format, Release 35 (10 MB, 10/7/14)

HT_Rat-Focus Annotations, MAGE-ML XML format, Release 21 (37 MB, 6/15/07)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 22 (35 MB, 6/15/07)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 23 (33 MB, 7/12/07)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 24 (32 MB, 11/6/07)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 25 (32 MB, 3/18/08)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 26 (33 MB, 7/8/08)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 27 (34 MB, 11/24/08)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 28 (35 MB, 3/12/09)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 29 (35 MB, 7/1/09)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 30 (37 MB, 11/15/09)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 31 (37 MB, 8/11/10)

HT_Rat-Focus Annotations, MAGE-ML XML Format, Release 32 (37 MB, 6/9/11)

HT_Rat-Focus BLASTP annotations, CSV format, Release 21 (2.5 MB, 11/15/06)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 22 (81 KB, 3/9/07)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 23 (128 KB, 7/12/07)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 24 (2.0 KB, 11/6/07)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 25 (990 B, 3/18/08)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 26 (4.3 KB, 7/8/08)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 27 (75 KB, 11/24/08)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 28 (1.7 KB, 3/4/09)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 29 (51 KB, 7/1/09)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 30 (52 KB, 11/16/09)

HT_Rat-Focus BLASTP annotations, CSV Format, Release 31 (56 KB, 8/11/10)

HT_Rat-Focus Orthologs/Homologs, CSV format, Release 21 (5.5 MB, 11/30/06)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 22 (6.1 MB, 3/9/07)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 23 (5.4 MB, 7/12/07)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 24 (4.8 MB, 11/6/07)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 25 (4.8 MB, 3/18/08)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 26 (5.4 MB, 7/8/08)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 27 (5.5 MB, 11/24/08)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 28 (5.9 MB, 3/12/09)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 29 (5.8 MB, 7/1/09)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 30 (6.0 MB, 11/15/09)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 31 (6.0 MB, 8/11/10)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 32 (5.8 MB, 6/9/11)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 33 (7.3 MB, 10/30/12)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 34 (7.6 MB, 1/23/14)

HT_Rat-Focus Orthologs/Homologs, CSV Format, Release 35 (8.1 MB, 10/7/14)