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Frequently Asked Questions

Support By Product

View all available support material by product name.

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Human Genome U133 Set - Support Materials

For more information, please see the product page.

Application Notes

Microarray Applications in Infectious Disease (pdf, 252 KB)

Array Comparisons

User's Guide to Product Comparison Spreadsheets (pdf, 82 KB)

HG-U133 to HG-U133 Plus, Best Match (zip, 5 KB)

HG-U133 to HG-U133 Plus, Complex (zip, 24 MB)

HG-U133 to HG-U133 Plus, Good Match (zip, 5 KB)

HG-U133 to HG-U133 Plus, No Match (zip, 1 KB)

HG-U95 to HG-U133, Best Match (zip, 842 KB)

HG-U95 to HG-U133, Complex (zip, 23.3 MB)

HG-U95 to HG-U133, Good Match (zip, 900 KB)

HG-U95 to HG-U133, No Match (zip, 54 KB)

Data Sheets

Human Genome Arrays (pdf, 117 KB) - Japanese Version

Frequently Asked Questions

Gene Expression Arrays

Human Genome U133 Set

Library Files

Human Genome U133 Set (zip, 25 MB)

Manuals

3' IVT Express Kit User Manual (pdf, 1.17 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

HT 3' IVT Express Kit (pdf 8.41 MB)

Probe Set Data in MAGE-ML Format

Mask Files

Human Genome U133A Set Normalization Controls (zip, 1 KB)

Human Genome U133B Set Normalization Controls (zip, 1 KB)

Package Inserts

Human Genome U133 Set (pdf, 532 KB)

Technical Notes

Annotation Methodology

Array Design for the Human Genome U133 Set (pdf, 18 MB)

Manufacturing Quality Control and Validation Studies of GeneChip® Arrays (pdf, 3.28 MB)

Performance and Validation of the Human Genome U133 Set (pdf, 42 MB)

Additional Support

Fluidics Scripts

Latin Square Data for Expression Algorithm Assessment

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

HG-U133A Alignments to Genome, PSL (3.7 MB, 9/28/06)

HG-U133B Alignments to Genome, PSL (2.5 MB, 9/28/06)

Current NetAffx Annotation Files

HG-U133A Annotations, CSV format, Release 30 (11 MB, 11/15/09)

HG-U133B Annotations, CSV format, Release 30 (8.2 MB, 11/15/09)

HG-U133A Annotations, MAGE-ML XML Format, Release 30 (46 MB, 11/15/09)

HG-U133B Annotations, MAGE-ML XML Format, Release 30 (31 MB, 11/15/09)

HG-U133A BLASTP annotations, CSV Format, Release 30 (14 KB, 11/16/09)

HG-U133B BLASTP annotations, CSV Format, Release 30 (26 KB, 11/16/09)

HG-U133A Orthologs/Homologs, CSV Format, Release 30 (4.7 MB, 11/15/09)

HG-U133B Orthologs/Homologs, CSV Format, Release 30 (2.7 MB, 11/15/09)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

HG-U133A Consensus Sequences, FASTA (6.9 MB, 8/20/08)

HG-U133B Consensus Sequences, FASTA (9.1 MB, 8/20/08)

HG-U133A Control Sequences, FASTA (22 KB, 3/28/03)

HG-U133B Control Sequences, FASTA (23 KB, 3/28/03)

HG-U133A Exemplar Sequences, FASTA (10 MB, 3/28/03)

HG-U133B Exemplar Sequences, FASTA (1.0 MB, 3/28/03)

HG-U133A Probe Sequences, FASTA (4.5 MB, 8/20/08)

HG-U133B Probe Sequences, FASTA (4.4 MB, 8/20/08)

HG-U133A Probe Sequences, Tabular (4.1 MB, 8/20/08)

HG-U133B Probe Sequences, Tabular (4.0 MB, 8/20/08)

HG-U133A Target Sequences, FASTA (4.5 MB, 8/20/08)

HG-U133B Target Sequences, FASTA (4.1 MB, 8/20/08)

Archived NetAffx Annotation Files

HG-U133A Annotations, BLASTP, Release 20 (2.8 MB, 7/14/06)

HG-U133B Annotations, BLASTP, Release 20 (1.2 MB, 7/14/06)

HG-U133A Annotations, BLASTX, Release 20 (1.6 MB, 6/23/04)

HG-U133B Annotations, BLASTX, Release 20 (389 KB, 6/23/04)

HG-U133A Annotations, CSV format, Release 21 (9.2 MB, 5/31/07)

HG-U133B Annotations, CSV format, Release 21 (7.9 MB, 5/31/07)

HG-U133A Annotations, CSV format, Release 22 (9.7 MB, 5/31/07)

HG-U133B Annotations, CSV format, Release 22 (8.1 MB, 5/31/07)

HG-U133A Annotations, CSV format, Release 23 (9.1 MB, 7/12/07)

HG-U133B Annotations, CSV format, Release 23 (7.1 MB, 7/12/07)

HG-U133A Annotations, CSV format, Release 24 (9.2 MB, 11/6/07)

HG-U133B Annotations, CSV format, Release 24 (7.3 MB, 11/6/07)

HG-U133A Annotations, CSV format, Release 25 (9.6 MB, 3/18/08)

HG-U133B Annotations, CSV format, Release 25 (7.6 MB, 3/18/08)

HG-U133A Annotations, CSV format, Release 26 (10 MB, 7/8/08)

HG-U133B Annotations, CSV format, Release 26 (7.7 MB, 7/8/08)

HG-U133A Annotations, CSV format, Release 27 (10 MB, 11/30/08)

HG-U133B Annotations, CSV format, Release 27 (7.7 MB, 11/30/08)

HG-U133A Annotations, CSV format, Release 28 (10 MB, 3/12/09)

HG-U133B Annotations, CSV format, Release 28 (7.9 MB, 3/12/09)

HG-U133A Annotations, CSV format, Release 29 (11 MB, 7/1/09)

HG-U133B Annotations, CSV format, Release 29 (7.9 MB, 7/1/09)

HG-U133A Annotations, CSV, Release 20 (9.1 MB, 5/31/07)

HG-U133B Annotations, CSV, Release 20 (7.8 MB, 5/31/07)

HG-U133A Annotations, MAGE-ML XML format, Release 21 (44 MB, 6/15/07)

HG-U133B Annotations, MAGE-ML XML format, Release 21 (32 MB, 6/15/07)

HG-U133A Annotations, MAGE-ML XML Format, Release 22 (40 MB, 6/15/07)

HG-U133B Annotations, MAGE-ML XML Format, Release 22 (31 MB, 6/15/07)

HG-U133A Annotations, MAGE-ML XML Format, Release 23 (40 MB, 7/12/07)

HG-U133B Annotations, MAGE-ML XML Format, Release 23 (28 MB, 7/12/07)

HG-U133A Annotations, MAGE-ML XML Format, Release 24 (40 MB, 11/6/07)

HG-U133B Annotations, MAGE-ML XML Format, Release 24 (28 MB, 11/6/07)

HG-U133A Annotations, MAGE-ML XML Format, Release 25 (40 MB, 3/18/08)

HG-U133B Annotations, MAGE-ML XML Format, Release 25 (29 MB, 3/18/08)

HG-U133A Annotations, MAGE-ML XML Format, Release 26 (42 MB, 7/8/08)

HG-U133B Annotations, MAGE-ML XML Format, Release 26 (29 MB, 7/8/08)

HG-U133A Annotations, MAGE-ML XML Format, Release 27 (43 MB, 11/24/08)

HG-U133B Annotations, MAGE-ML XML Format, Release 27 (30 MB, 11/24/08)

HG-U133A Annotations, MAGE-ML XML Format, Release 28 (45 MB, 3/12/09)

HG-U133B Annotations, MAGE-ML XML Format, Release 28 (30 MB, 3/12/09)

HG-U133A Annotations, MAGE-ML XML Format, Release 29 (45 MB, 7/1/09)

HG-U133B Annotations, MAGE-ML XML Format, Release 29 (31 MB, 7/1/09)

HG-U133A Annotations, MAGE-ML XML, Release 20 (43 MB, 6/15/07)

HG-U133B Annotations, MAGE-ML XML, Release 20 (32 MB, 6/15/07)

HG-U133A Annotations, Orthologs, Release 20 (3.8 MB, 8/21/06)

HG-U133B Annotations, Orthologs, Release 20 (2.8 MB, 8/21/06)

HG-U133A BLASTP annotations, CSV format, Release 21 (2.9 MB, 11/15/06)

HG-U133B BLASTP annotations, CSV format, Release 21 (1.3 MB, 11/15/06)

HG-U133A BLASTP annotations, CSV Format, Release 22 (44 KB, 3/9/07)

HG-U133B BLASTP annotations, CSV Format, Release 22 (87 KB, 3/9/07)

HG-U133A BLASTP annotations, CSV Format, Release 23 (40 KB, 7/12/07)

HG-U133B BLASTP annotations, CSV Format, Release 23 (89 KB, 7/12/07)

HG-U133A BLASTP annotations, CSV Format, Release 24 (2.0 KB, 11/6/07)

HG-U133B BLASTP annotations, CSV Format, Release 24 (4.7 KB, 11/6/07)

HG-U133A BLASTP annotations, CSV Format, Release 25 (20 KB, 3/18/08)

HG-U133B BLASTP annotations, CSV Format, Release 25 (37 KB, 3/18/08)

HG-U133A BLASTP annotations, CSV Format, Release 26 (5.5 KB, 7/8/08)

HG-U133B BLASTP annotations, CSV Format, Release 26 (4.3 KB, 7/8/08)

HG-U133A BLASTP annotations, CSV Format, Release 27 (26 KB, 11/24/08)

HG-U133B BLASTP annotations, CSV Format, Release 27 (39 KB, 11/24/08)

HG-U133A BLASTP annotations, CSV Format, Release 28 (2.9 KB, 3/4/09)

HG-U133B BLASTP annotations, CSV Format, Release 28 (4.6 KB, 3/4/09)

HG-U133A BLASTP annotations, CSV Format, Release 29 (3.0 KB, 7/1/09)

HG-U133B BLASTP annotations, CSV Format, Release 29 (3.0 KB, 7/1/09)

HG-U133A Orthologs/Homologs, CSV format, Release 21 (4.0 MB, 11/30/06)

HG-U133B Orthologs/Homologs, CSV format, Release 21 (2.9 MB, 11/30/06)

HG-U133A Orthologs/Homologs, CSV Format, Release 22 (4.3 MB, 3/9/07)

HG-U133B Orthologs/Homologs, CSV Format, Release 22 (3.2 MB, 3/9/07)

HG-U133A Orthologs/Homologs, CSV Format, Release 23 (4.2 MB, 7/12/07)

HG-U133B Orthologs/Homologs, CSV Format, Release 23 (2.3 MB, 7/12/07)

HG-U133A Orthologs/Homologs, CSV Format, Release 24 (4.0 MB, 11/6/07)

HG-U133B Orthologs/Homologs, CSV Format, Release 24 (2.2 MB, 11/6/07)

HG-U133A Orthologs/Homologs, CSV Format, Release 25 (4.0 MB, 3/18/08)

HG-U133B Orthologs/Homologs, CSV Format, Release 25 (2.2 MB, 3/18/08)

HG-U133A Orthologs/Homologs, CSV Format, Release 26 (4.3 MB, 7/8/08)

HG-U133B Orthologs/Homologs, CSV Format, Release 26 (2.4 MB, 7/8/08)

HG-U133A Orthologs/Homologs, CSV Format, Release 27 (4.6 MB, 11/24/08)

HG-U133B Orthologs/Homologs, CSV Format, Release 27 (2.6 MB, 11/24/08)

HG-U133A Orthologs/Homologs, CSV Format, Release 28 (4.9 MB, 3/12/09)

HG-U133B Orthologs/Homologs, CSV Format, Release 28 (2.7 MB, 3/12/09)

HG-U133A Orthologs/Homologs, CSV Format, Release 29 (4.9 MB, 7/1/09)

HG-U133B Orthologs/Homologs, CSV Format, Release 29 (2.8 MB, 7/1/09)