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Human Genome U133 Plus 2.0 Array - Support Materials

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Application Notes

Microarray Applications in Infectious Disease (pdf, 252 KB)

Microarrays in Cancer Research (pdf, 423 KB)

Brochure

Expression Microarray Reagent Guide (pdf, 244 KB)

Array Comparisons

Bovine to HG-U133 Plus, Best Match (zip, 100 KB)

Bovine to HG-U133 Plus, Complex (zip, 598 KB)

Bovine to HG-U133 Plus, Good Match (zip, 103 KB)

Bovine to HG-U133 Plus, No Match (zip, 27 KB)

Canine 2.0 to HG-U133 Plus, Best Match (zip, 164 KB)

Canine 2.0 to HG-U133 Plus, Complex Match (zip, 1.4 MB)

Canine 2.0 to HG-U133 Plus, Good Match (zip, 182 KB)

Canine 2.0 to HG-U133 Plus, No Match (zip, 32 KB)

Canine to HG-U133 Plus, All (zip, 433 KB)

Canine to HG-U133 Plus, Best Match (zip, 19 KB)

Canine to HG-U133 Plus, Good Match (zip, 20 KB)

Canine to HG-U133 Plus, No Match (zip, 30 KB)

HG-U133 Plus 2.0 to Rhesus Best Match

HG-U133 Plus 2.0 to Rhesus Complex

HG-U133 Plus 2.0 to Rhesus Good Match

HG-U133 Plus 2.0 to Rhesus No Match

HG-U133 Plus to Human Exon 1.0 ST, Best Match (zip, 899 KB)

HG-U133 Plus to Human Exon 1.0 ST, Complex Match (zip, 36 MB)

HG-U133 Plus to Human Exon 1.0 ST, Good Match (zip, 937 KB)

HG-U133 Plus to Human Exon 1.0 ST, No Match (zip, 1.5 KB)

HG-U133 Plus to Human Gene 1.0 ST, Best Match (zip, 651 KB)

HG-U133 Plus to Human Gene 1.0 ST, Complex Match (zip, 2.7 MB)

HG-U133 Plus to Human Gene 1.0 ST, Good Match (zip, 658 KB)

HG-U133 Plus to Human Gene 1.0 ST, No Match (zip, 38 KB)

HG-U133 to HG-U133 Plus, Best Match (zip, 5 KB)

HG-U133 to HG-U133 Plus, Complex (zip, 24 MB)

HG-U133 to HG-U133 Plus, Good Match (zip, 5 KB)

HG-U133 to HG-U133 Plus, No Match (zip, 1 KB)

HG-U219 to HG-U133_Plus_2, Best Match (zip, 1 MB)

HG-U219 to HG-U133_Plus_2, Complex Match (zip, 3.2 MB)

HG-U219 to HG-U133_Plus_2, Good Match (zip, 1.3 MB)

HG-U219 to HG-U133_Plus_2, No Match (zip, 6 KB)

HG-U95 to HG-U133 Plus, Best Match (zip, 35 KB)

HG-U95 to HG-U133 Plus, Complex (zip, 37 MB)

HG-U95 to HG-U133 Plus, Good Match (zip, 37 KB)

HG-U95 to HG-U133 Plus, No Match (zip, 1 KB)

Mouse 430 to HG-U133, Best Match (zip, 1 KB)

Mouse 430 to HG-U133, Complex (zip, 513 KB)

Mouse 430 to HG-U133, Good Match (zip, 1 KB)

Mouse 430 to HG-U133, No Match (zip, 111 KB)

Porcine to HG-U133 Plus, Best Match (zip, 109 KB)

Porcine to HG-U133 Plus, Complex (zip, 596 KB)

Porcine to HG-U133 Plus, Good Match (zip, 112 KB)

Porcine to HG-U133 Plus, No Match (zip, 28 KB)

Rat 230 to HG-U133 Plus, Best Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, Complex (zip, 225 KB)

Rat 230 to HG-U133 Plus, Good Match (zip, 1 KB)

Rat 230 to HG-U133 Plus, No Match (zip, 79 KB)

Data Sheets

GeneChip 3' IVT Array Data Sheet, Human, Mouse, Rat (pdf, 9.05MB)-Japanese Version

Human Genome U133 Arrays (pdf, 1.76 MB)

Frequently Asked Questions

Gene Expression Arrays

Human Genome U133 2.0 Arrays

Library Files

Human Genome U133 Plus 2.0 Array (zip, 30 MB)

Manuals

3' IVT PLUS Reagent Kit User Manual (pdf, 2 MB)

Alignment Data in PSL Format

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Mask Files

Human Genome U133 Plus 2.0 Array Normalization Controls (zip, 1 KB)

Package Inserts

Human Genome U133 Plus 2.0 Array (pdf, 493 KB)

Technical Notes

Design and Performance of the GeneChip® Human Genome U133 Plus 2.0 and Human Genome U133A 2.0 Array (pdf, 207 KB)

GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)

Additional Support

Fluidics Scripts

MicroArrayQuality Control Study (MAQC - pdf, 1.5 MB)

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

NetAffx Alignment Files

HG-U133_Plus_2 Alignments to Genome, PSL (7.4 MB, 9/28/06)

HG-U133_Plus_2 BED File (9.9 MB, 8/22/16)

Current NetAffx Annotation Files

HG-U133_Plus_2 Annotations, CSV format, Release 36 (36 MB, 7/12/16)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 36 (10 MB, 7/12/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

HG-U133_Plus_2 Consensus Sequences, FASTA (22 MB, 8/20/08)

HG-U133_Plus_2 Control Sequences, FASTA (20 KB, 10/17/03)

HG-U133_Plus_2 Exemplar Sequences, FASTA (12 MB, 10/17/03)

HG-U133_Plus_2 Probe Sequences, FASTA (11 MB, 8/20/08)

HG-U133_Plus_2 Probe Sequences, Tabular (9.9 MB, 8/20/08)

HG-U133_Plus_2 Target Sequences, FASTA (11 MB, 8/20/08)

Archived NetAffx Annotation Files

HG-U133_Plus_2 Annotations, BLASTP, Release 20 (4.4 MB, 7/14/06)

HG-U133_Plus_2 Annotations, BLASTX, Release 20 (2.2 MB, 6/23/04)

HG-U133_Plus_2 Annotations, CSV format, Release 21 (19 MB, 5/31/07)

HG-U133_Plus_2 Annotations, CSV format, Release 22 (20 MB, 5/31/07)

HG-U133_Plus_2 Annotations, CSV format, Release 23 (18 MB, 7/12/07)

HG-U133_Plus_2 Annotations, CSV format, Release 24 (18 MB, 11/6/07)

HG-U133_Plus_2 Annotations, CSV format, Release 25 (19 MB, 3/18/08)

HG-U133_Plus_2 Annotations, CSV format, Release 26 (20 MB, 7/8/08)

HG-U133_Plus_2 Annotations, CSV format, Release 27 (20 MB, 11/30/08)

HG-U133_Plus_2 Annotations, CSV format, Release 28 (21 MB, 3/12/09)

HG-U133_Plus_2 Annotations, CSV format, Release 29 (21 MB, 7/1/09)

HG-U133_Plus_2 Annotations, CSV format, Release 30 (22 MB, 11/15/09)

HG-U133_Plus_2 Annotations, CSV format, Release 31 (22 MB, 8/23/10)

HG-U133_Plus_2 Annotations, CSV format, Release 32 (22 MB, 6/9/11)

HG-U133_Plus_2 Annotations, CSV format, Release 33 (26 MB, 10/30/12)

HG-U133_Plus_2 Annotations, CSV format, Release 34 (30 MB, 1/23/14)

HG-U133_Plus_2 Annotations, CSV format, Release 35 (33 MB, 4/16/15)

HG-U133_Plus_2 Annotations, CSV, Release 20 (19 MB, 5/31/07)

HG-U133_Plus_2 Annotations, MAGE-ML XML format, Release 21 (92 MB, 6/15/07)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 22 (85 MB, 6/15/07)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 23 (82 MB, 7/12/07)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 24 (82 MB, 11/6/07)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 25 (83 MB, 3/18/08)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 26 (85 MB, 7/9/08)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 27 (92 MB, 11/24/08)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 28 (89 MB, 3/12/09)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 29 (90 MB, 7/1/09)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 30 (92 MB, 11/15/09)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 31 (91 MB, 8/23/10)

HG-U133_Plus_2 Annotations, MAGE-ML XML Format, Release 32 (91 MB, 6/9/11)

HG-U133_Plus_2 Annotations, MAGE-ML XML, Release 20 (90 MB, 6/15/07)

HG-U133_Plus_2 Annotations, Orthologs, Release 20 (7.5 MB, 8/21/06)

HG-U133_Plus_2 BLASTP annotations, CSV format, Release 21 (4.6 MB, 11/15/06)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 22 (144 KB, 3/9/07)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 23 (145 KB, 7/12/07)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 24 (8.3 KB, 11/6/07)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 25 (66 KB, 3/18/08)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 26 (11 KB, 7/8/08)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 27 (77 KB, 11/24/08)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 28 (8.6 KB, 3/4/09)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 29 (7.4 KB, 7/1/09)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 30 (47 KB, 11/16/09)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 31 (58 KB, 8/11/10)

HG-U133_Plus_2 BLASTP annotations, CSV Format, Release 32 (9.6 KB, 6/9/11)

HG-U133_Plus_2 Orthologs/Homologs, CSV format, Release 21 (7.8 MB, 11/30/06)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 22 (8.5 MB, 3/9/07)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 23 (7.2 MB, 7/12/07)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 24 (6.9 MB, 11/6/07)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 25 (6.9 MB, 3/18/08)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 26 (7.4 MB, 7/8/08)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 27 (8.9 MB, 11/24/08)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 28 (8.4 MB, 3/12/09)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 29 (8.4 MB, 7/1/09)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 30 (8.2 MB, 11/15/09)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 31 (8.2 MB, 8/11/10)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 32 (8.2 MB, 6/9/11)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 33 (9.0 MB, 10/30/12)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 34 (9.5 MB, 1/23/14)

HG-U133_Plus_2 Orthologs/Homologs, CSV Format, Release 35 (10 MB, 10/7/14)