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Genome-Wide Human SNP Array 6.0 for Cytogenetics - Support Materials

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Application Notes

Copy-neutral Loss of Heterozygosity in Cancer (pdf, 1.07 MB)

Data Sheets

Human Mapping 500K Array Set (pdf, 192 KB)

Library Files

Genome-Wide Human SNP Array 6.0 (zip, 246 MB)

Note: Affymetrix is providing alternative CDF files, for the Affymetrix genotyping array- Genome-Wide Human SNP Array 5.0. These CDF files provide uniform access to the Copy Number probe content by presenting "one probe per probeset" in both the full and default updated CDF files. This uniform access applies to both Affymetrix genotyping arrays with Copy Number content- Genome-Wide Human SNP Array 5.0 and Genome-Wide Human SNP Array 6.0.


Cytogenetics Copy Number Assay User Guide (pdf, 3.46 MB)

Safety Data Sheets

Genome-Wide Human SNP 5.0/6.0 Assay Kits, with Reference DNA (zip, 333 KB)

MSDS, SNP 6.0 Core Reagent Kit (zip, 476 KB)

Package Inserts

Genome-Wide Human SNP Array 6.0 (pdf, 102 KB)

Genome-Wide Human SNP Nsp/Sty Assay Kit 5.0/6.0 (pdf, 76 KB)

SNP 6.0 Core Reagent Kit (pdf, 252 KB)

Quick Reference Cards

Cytogenetics Copy Number Assay, Workflow Overview (pdf, 472 KB)

Sample Data

Genome-Wide Human SNP Array 6.0 Sample Data Set for Cytogenetics (zip, 338 MB)

Technical Notes

Associating Copy Number and SNP Variation with Human Disease (pdf, 593 KB)

White Papers

BRLMM Algorithm for Affymetrix Mapping Arrays (pdf, 278 KB)

Genotyping Console™ Quality Control Assessment (pdf, 1.07 MB)

Additional Support

Fluidics Scripts

Literature and Resource Guide for the Genome-Wide SNP Array 6.0 (pdf, 71 KB)

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files