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Canine Genome Array - Support Materials

Canine Genome Array has been discontinued. The following support materials are still available.

Array Comparisons

Canine to Canine 2.0 Best Match

Canine to Canine 2.0 Complex

Canine to Canine 2.0 Good Match

Canine to Canine 2.0 No Match

Canine to HG-U133 Plus, All (zip, 433 KB)

Canine to HG-U133 Plus, Best Match (zip, 19 KB)

Canine to HG-U133 Plus, Good Match (zip, 20 KB)

Canine to HG-U133 Plus, No Match (zip, 30 KB)

Canine to MOE430, All (zip, 313 KB)

Canine to MOE430, Best Match (zip, 5 KB)

Canine to MOE430, Good Match (zip, 5 KB)

Canine to MOE430, No Match (zip, 37 KB)

Canine to RAE230, All (zip, 224 KB)

Canine to RAE230, Best Match (zip, 5 KB)

Canine to RAE230, Good Match (zip, 5 KB)

Canine to RAE230, No Match (zip, 42 KB)

Frequently Asked Questions

Gene Expression Arrays

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Technical Notes

GeneChip® Expression Platform: Comparison, Evolution, and Performance (pdf, 269 KB)

Additional Support

Fluidics Scripts

Probe Set Data in MAGE-ML Format

Alignment, Annotation, and Sequence files

Information about using Alignment, Annotation, and Sequence files

Current NetAffx Annotation Files

Canine Annotations, CSV format, Release 36 (6.0 MB, 4/13/16)

Canine Orthologs/Homologs, CSV Format, Release 36 (7.1 MB, 4/13/16)

Note: NetAffx Annotation Files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probesets of interest. Annotation CSV files for the exon arrays are split into a probeset level annotation file and a transcript cluster level annotation file; exon array CSV files are compatible with ExACT.

Sequence Files

Canine Consensus Sequences, FASTA (5.9 MB, 8/20/08)

Canine Control Sequences, FASTA (20 KB, 6/28/05)

Canine Probe Sequences, FASTA (4.6 MB, 8/20/08)

Canine Probe Sequences, Tabular (4.1 MB, 8/20/08)

Canine Target Sequences, FASTA (3.8 MB, 8/20/08)

Archived NetAffx Annotation Files

Canine Annotations, BLASTP, Release 20 (1.6 MB, 7/14/06)

Canine Annotations, BLASTX, Release 20 (1.6 MB, 6/23/04)

Canine Annotations, CSV format, Release 21 (3.9 MB, 5/31/07)

Canine Annotations, CSV format, Release 22 (3.9 MB, 5/31/07)

Canine Annotations, CSV format, Release 23 (3.8 MB, 7/12/07)

Canine Annotations, CSV format, Release 24 (3.8 MB, 11/6/07)

Canine Annotations, CSV format, Release 25 (3.8 MB, 3/18/08)

Canine Annotations, CSV format, Release 26 (3.6 MB, 7/8/08)

Canine Annotations, CSV format, Release 27 (3.5 MB, 11/30/08)

Canine Annotations, CSV format, Release 28 (3.5 MB, 3/12/09)

Canine Annotations, CSV format, Release 29 (3.6 MB, 7/1/09)

Canine Annotations, CSV format, Release 30 (3.6 MB, 11/15/09)

Canine Annotations, CSV format, Release 31 (3.6 MB, 8/11/10)

Canine Annotations, CSV format, Release 32 (3.6 MB, 6/9/11)

Canine Annotations, CSV format, Release 33 (4.5 MB, 10/30/12)

Canine Annotations, CSV format, Release 34 (4.9 MB, 1/23/14)

Canine Annotations, CSV format, Release 35 (5.6 MB, 10/7/14)

Canine Annotations, CSV, Release 20 (3.8 MB, 5/31/07)

Canine Annotations, MAGE-ML XML format, Release 21 (26 MB, 6/15/07)

Canine Annotations, MAGE-ML XML Format, Release 22 (24 MB, 6/15/07)

Canine Annotations, MAGE-ML XML Format, Release 23 (22 MB, 7/12/07)

Canine Annotations, MAGE-ML XML Format, Release 24 (22 MB, 11/6/07)

Canine Annotations, MAGE-ML XML Format, Release 25 (22 MB, 3/18/08)

Canine Annotations, MAGE-ML XML Format, Release 26 (22 MB, 7/8/08)

Canine Annotations, MAGE-ML XML Format, Release 27 (23 MB, 11/24/08)

Canine Annotations, MAGE-ML XML Format, Release 28 (23 MB, 3/12/09)

Canine Annotations, MAGE-ML XML Format, Release 29 (23 MB, 7/1/09)

Canine Annotations, MAGE-ML XML Format, Release 30 (24 MB, 11/15/09)

Canine Annotations, MAGE-ML XML Format, Release 31 (24 MB, 8/11/10)

Canine Annotations, MAGE-ML XML Format, Release 32 (24 MB, 6/9/11)

Canine Annotations, MAGE-ML XML, Release 20 (24 MB, 6/15/07)

Canine Annotations, Orthologs, Release 20 (3.1 MB, 8/21/06)

Canine BLASTP annotations, CSV format, Release 21 (1.6 MB, 11/15/06)

Canine BLASTP annotations, CSV Format, Release 22 (154 KB, 3/9/07)

Canine BLASTP annotations, CSV Format, Release 23 (155 KB, 7/12/07)

Canine BLASTP annotations, CSV Format, Release 26 (600 B, 7/8/08)

Canine BLASTP annotations, CSV Format, Release 27 (193 KB, 11/24/08)

Canine BLASTP annotations, CSV Format, Release 28 (5.6 KB, 3/4/09)

Canine BLASTP annotations, CSV Format, Release 29 (684 B, 7/1/09)

Canine BLASTP annotations, CSV Format, Release 30 (768 B, 11/16/09)

Canine BLASTP annotations, CSV Format, Release 31 (768 B, 8/11/10)

Canine BLASTP annotations, CSV Format, Release 32 (387 B, 6/9/11)

Canine Orthologs/Homologs, CSV format, Release 21 (3.8 MB, 11/30/06)

Canine Orthologs/Homologs, CSV Format, Release 22 (4.3 MB, 3/9/07)

Canine Orthologs/Homologs, CSV Format, Release 23 (3.5 MB, 7/12/07)

Canine Orthologs/Homologs, CSV Format, Release 24 (3.4 MB, 11/6/07)

Canine Orthologs/Homologs, CSV Format, Release 25 (3.4 MB, 3/18/08)

Canine Orthologs/Homologs, CSV Format, Release 26 (3.4 MB, 7/8/08)

Canine Orthologs/Homologs, CSV Format, Release 27 (3.7 MB, 11/24/08)

Canine Orthologs/Homologs, CSV Format, Release 28 (4.0 MB, 3/12/09)

Canine Orthologs/Homologs, CSV Format, Release 29 (3.9 MB, 7/1/09)

Canine Orthologs/Homologs, CSV Format, Release 30 (4.0 MB, 11/15/09)

Canine Orthologs/Homologs, CSV Format, Release 31 (4.0 MB, 8/11/10)

Canine Orthologs/Homologs, CSV Format, Release 32 (4.0 MB, 6/9/11)

Canine Orthologs/Homologs, CSV Format, Release 33 (5.2 MB, 10/30/12)

Canine Orthologs/Homologs, CSV Format, Release 34 (6.1 MB, 1/23/14)

Canine Orthologs/Homologs, CSV Format, Release 35 (7.0 MB, 10/7/14)