What QC metrics will I use to assess the quality of my data?
- Mean absolute relative log expression – MA (RLE)
- Detection of 20X spikes, Bio B, Bio C, Bio D & Cre
- House keeping controls
- Poly A controls
- Antigenomic GC – 12 background probes
- PM mean
- Please refer to the QC Metrics for Human, Mouse and Rat HT PM Array Plates QRC for more information