< | > | glossary|All Topics
Affymetrix® Genotyping Console™ Software
index | previous question | next question
Copy Number Analysis
Which copy number workflows for the 100K Set/500K Array Set are supported in GTC 3.0.1?
The following paired and unpaired analysis workflows are supported for the 100K Set/500K Array Set:
- Copy number (CN)
- Loss of heterozygosity (LOH)
- Copy number segment reporting
- Custom region copy number segment reporting
Paired CN Analysis is used to compare two samples from the same individual to look for copy number differences in different types of tissues.
Unpaired CN Analysis is used to compare sample files to a set of reference files.