Are you going to implement any of the splice variant analysis algorithms, e.g., ANOSVA, Deconv, etc. within ExACT, and if yes, when?
Currently Affymetrix is actively researching several different methods. Since the alternative splicing analysis is still very new, we have limited experience of the robustness of each of these methods in different sample data sets. As those methods prove to be robust, we will consider implementing them, in either ExACT, or other analysis packages.