Affymetrix - Help - FAQ - How does the Mapping 100K Set data quality compare with HapMap data?

How does the Mapping 100K Set data quality compare with HapMap data?

~20,000 SNPs on the Mapping 100K Set were in HapMap Release 8
90 individuals (30 trios) genotyped to give ~2 million genotype comparisons
Data completeness: 99.66%
Genotype Concordance: 99.78%.
For discordant genotypes, it is unknown whether the genotyping error is made by the Mapping 100K Set or the other technology.


			How does the Mapping 100K Set data quality compare with HapMap data?

			~20,000 SNPs on the Mapping 100K Set were in HapMap Release 8 90 individuals (30 trios) genotyped to give ~2 million genotype comparisons Data completeness: 99.66% Genotype Concordance: 99.78%. For discordant genotypes, it is unknown whether the genotyping error is made by the Mapping 100K Set or the other technology.