MANUAL: apt-dump-pgf (apt-1.10.1)

apt-dump-pgf will dump information from a pgf and clf file.

Quick Start

To dump information from a pgf file, use:

apt-dump-pgf -c file.clf -p file.pgf \
  [--probeset-type=type [--probeset-type=...]]

apt-dump-pgf -c file.clf -p file.pgf \
  [--probeset-ids=file [--probeset-ids=...]]

apt-dump-pgf -c file.clf -p file.pgf \
  [--probe-ids=file [--probe-ids=...]]

Options:

apt-dump-pgf - Dump information from a pgf file.
Usage:
   apt-dump-pgf -o int.txt -c file.clf -p file.pgf [--probeset-type=type [--probeset-type=...]]

   apt-dump-pgf -o int.txt -c file.clf -p file.pgf [--probeset-ids=file [--probeset-ids=...]]

   apt-dump-pgf -o int.txt -c file.clf -p file.pgf [--probe-ids=file [--probe-ids=...]]

options:
   -p, --pgf-file                        The pgf file used to dump information. 
                       [default ''] 
   -c, --clf-file Optional clf file to use. When present, probe
                       position will be included in the output.
                       [default ''] 
     --probeset-only Dump only probeset level information. [default
                       'false'] 
     --probeset-type Optional probeset type to extract; can be
                       specified multiple times. When specified
                       multiple times, the intersection of all types
                       is taken. The user cannot mix use of
                       probeset-type, probeset-ids, and probe-ids.
                       [default ''] 
   -s, --probeset-ids Optional name of a file containing probeset 
                       ids to extract; can be specified multiple
                       times. The user cannot mix use of
                       probeset-type, probeset-ids, and probe-ids.
                       [default ''] 
     --probe-ids Optional name of a file containing probe ids 
                       to extract; can be specified multiple times.
                       The user cannot mix use of probeset-type,
                       probeset-ids, and probe-ids. [default ''] 
     --or Use the union of the types requested, not the
                       intersection. [default 'false'] 
   -o, --out-file Output file to contain the dump output.
                       [default ''] 
     --version Display version information. [default 'false'] 
   -h, --help Print help message. [default 'false'] 

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