GeneChip® Sequence Analysis Software (GSEQ)


Overview

GeneChip® Sequence Analysis Software (GSEQ) enables scientists to perform comparative sequencing by providing high-quality sequence information and automatic detection of SNP sites in a single analysis package.

GSEQ provides an integrated analysis workflow to enable high-content, high-throughput, and accurate sequencing applications.

Download Information and Instructions

Download GSEQ 4.1(zip, 13.6 MB)  * Posted on 05/15/08

Benefits

  • Automated base calling with > 90 percent Call Rates and >99.9 percent accuracy
  • Reporting of Call Rate by sample and by individual fragment
  • Automatic assignment of base calls with editing and edit tracking
  • Detailed analysis of No-Calls through display of Force Call and No Call criteria
  • Alignment and display of sequences from multiple samples
  • Display of genomic positions and PCR start/stop positions
  • SNP Viewer with graphical display summarizing SNP calls by samples at SNP sites
  • Trace view of probe intensities in the context of adjacent bases
  • File Sets allows customized groupings of samples from multiple projects
  • Flexible Export options: Export FASTA format of all sequences or of SNPs only

Related Products

GeneChip® Command Console® Software (AGCC)