Most comprehensive whole-genome array set for discovering novel RNA transcripts
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Only commercially available whole-genome array set for mouse transcript mapping
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High-density 35-bp probe spacing offers a more accurate view of novel RNA transcripts
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25-mer probes offer the most specific hybridization results
Array Profile
The GeneChip® Mouse Tiling 1.1R Array Set is designed for transcript mapping experiments to identify novel mouse RNAs. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the mouse genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions.
Sequences used in the design of the Mouse Tiling 1.1R Array Set were selected from NCBI mouse genome assembly (Build 33). Repetitive elements were removed by RepeatMasker. Probes are tiled at an average resolution of 35 bp, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 bp between probes.
Instrument and Software Requirements
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GeneChip® Scanner 3000 7G
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GeneChip® Operating Software (GCOS) version 1.3 or higher
