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GeneChip® Maize Genome Array

The GeneChip® Maize Genome Array contains probe sets to detect transcripts from Zea mays, one of the most economically important crops in the world. The GeneChip® Maize Genome Array, through examination of gene expression patterns of Zea mays, will enable researches to view the global transcription effects of external stimuli, such as fertilizers, pesticides, and growth conditions.

  • The GeneChip Maize Genome Array provides comprehensive coverage of over 100 cultivars present in NCBI's UniGene data set, including the most highly represented strains: B73, Ohio43, W22, W23, W64A, and Black Mexican Sweet.
  • The Maize Genome Array has 17,555 probe sets to interrogate approximately 14,850 Zea mays transcripts, which represent 13,339 genes (12,113 of which are represented in distinct UniGene clusters).
  • Use the Power of the Probe Set and get multiple independent measurements for each transcript that delivers the greatest accuracy and reproducibility of any microarray platform.
  • GeneChip® System: richer data, sharper insights, better decisions.

Array Profile
The sequence information for this array was selected from NCBI's GenBank® (up to September 29, 2004) and Zea mays UniGene Build 42 (July 23, 2004) databases. Probe sets on the array include 15 oligonucleotide pairs to detect each transcript, for added robustness and to facilitate detection of polymorphisms.

Instrument and Software Requirements

  • GeneChip Scanner 3000, enabled for High-Resolution Scanning*
  • GeneChip Operating Software (GCOS) v1.1.1 or higher, which includes the GeneChip Scanner 3000 High-Resolution Scanning Patch

*GeneChip Scanner 3000 High-Resolution Update is standard on all instruments shipped starting in September 2003 with serial number series 502. Previous versions, serial number series 501, will require the 00-0110 GeneChip Scanner 3000 High-Resolution Update to be installed.

The Maize Genome Array was created within the Affymetrix GeneChip® Consortia Program.

Find individual probe sets on all GeneChip® expression arrays with Array Finder.

For more information, please review the data sheet (83 KB).
ORDERING INFORMATION

Part # Description
900614 Maize Genome Array
contains 2 arrays
900615 Maize Genome Array
contains 6 arrays
900616 Maize Genome Array
contains 30 arrays
 
How to order products from Affymetrix.
 
Pricing Information
RELATED PRODUCTS
Scanner 3000 with Workstation
GeneChip® Operating Software (GCOS)
SUPPORT
Maize Genome Array (pdf, 83 KB)
Gene Expression Arrays
Maize Genome Array (zip, 12 MB)
Expression Analysis Technical Manual
View More...
Maize Genome Array (pdf, 92 KB)
ADDITIONAL SUPPORT
Fluidics Scripts
Probe Set Data in Tabular Format
All Support Materials for Maize Genome Array
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