| |
|
Probe Sets
|
1.4 million |
| Exon Clusters |
> 1 million |
| Supported by Putative Full-Length mRNA |
289,961 probe sets |
| Supported by Ensembl Transcripts |
306,583 probe sets |
| Supported by EST |
665,175 probe sets |
| Supported by Mouse or Rat mRNA |
220,262 probe sets |
| Supported by Gene Prediction |
883,105 probe sets |
| Probe Selection Region |
Along the entire length of the transcripts |
| Probes/Probe Selection Region |
4¹ |
| Background Subtraction Strategy |
Median intensity of up to 1,000 background probes with the same GC content |
| Total Features Per Array |
>5,500,000 |
| Interrogated Strand |
Sense² |
¹ About 10 percent of the exon probe sets have fewer than four probes due to the probe selection region length and sequence constraints.
²The probes tiled on the array are designed in the anti-sense orientation, requiring sense-strand
labeled targets to be hybridized to the array. By convention, the array is called ST array
representing the necessity of using sense targets (the labeled samples to be hybridized to the array).
|
