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GeneChip® Drosophila Tiling 2.0R Array

The GeneChip® Drosophila Tiling 2.0R Array is Affymetrix' second-generation Drosophila Tiling Array. GeneChip Drosophila Tiling Arrays are versatile, whole-genome tools that researchers have successfully used to map novel areas of transcription and to interpret chromatin IP results on a genome-wide level.

The Drosophila Tiling 2.0R Array builds on the content of its predecessor and includes additional sequences that have since become available through the Berkeley Drosophila Genome Project (BDGP). The majority of the new sequences are located in the heterochromatin regions of the Drosophila genome.

Array Features

Up-to-date sequence content
  Based on BDGP genome release 5
  Release 5 improvements include heterochromatin regions, which contain several hundred known and predicted genes
New design strategy enables a complete representation of the genome
  Includes repetitive regions
  No repeat masking used in chip design
  Novel tiling array design (see the Affymetrix White Paper, Drosophila Tiling 2.0R Array Design and Library files)
  25-mer oligonucleotide probes interrogate the entire genome with an average 38-base-pair spacing
Flexible analysis options
  Default analysis library file (bpmap file) excludes repetitive regions as defined by FlyBase 5.2 and UCSC Genome Browser repeat annotations
  Entire array content analysis library file available upon request through Customer Support

Note: Due to the different content, design strategy and analysis library file content, direct comparisons of results between the Drosophila Tiling 1.0R Array and the Drosophila Tiling 2.0R Array are not recommended.

Instrument and Software Requirements

GeneChip® Scanner 3000 7G
GeneChip® Operating Software (GCOS) version 1.0 or greater

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ORDERING INFORMATION

Part # Description
901021 GeneChip® Drosophila Tiling 2.0R Array
contains 6 arrays
 
How to order products from Affymetrix.
 
Pricing Information
RELATED PRODUCTS
Control Oligo B2, 3nM
WT Double-Stranded DNA Terminal Labeling Kit
WT Double-Stranded cDNA Synthesis Kit
Tiling Array Tools
Integrated Genome Browser (IGB)
Tiling Analysis Software (TAS)
SUPPORT
ChIP-on-chip (pdf, 487 KB)
Drosophila Tiling 2.0R Array (zip, 114 MB)
Chromatin Immunoprecipitation Assay Protocol (pdf, 679 KB)
View More...
Drosophila Tiling 2.0R Array (pdf, 127 KB)
Tiling Array Sample Data
Tiling Analysis Software Tutorial
Drosophila Tiling 2.0R Array Design and Library files (pdf, 59 KB)
ADDITIONAL SUPPORT
Scientific Forum, 1st European ChIP-on-chip
Webinar, Six-part ChIP-on-chip Symposia Series
All Support Materials for Drosophila Tiling 2.0R Array
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