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GeneChip® Arabidopsis Tiling 1.0R Array

GeneChip® Arabidopsis Tiling 1.0R Array is a versatile whole-genome research tool:

Most comprehensive Arabidopsis microarray offering high-density 35 base pair probe spacing
High-density array design is compatible with many research applications
25-mer probes yield the most specific hybridization results available

Array Profile

The GeneChip® Arabidopsis Tiling 1.0R Array is designed for identifying novel transcripts, mapping sites of protein/DNA interaction in chromatin immunoprecipitation (ChIP) experiments, and other whole-genome experiments. The Arabidopsis 1.0R Array is a single array comprised of over 3.2 million probe pairs tiled through the complete non-repetitive Arabidopsis thaliana genome. Sequences used in the design of the Arabidopsis Tiling 1.0R Array were selected from NCBI Arabidopsis genome assembly (Version 5). Mitochondrial and chloroplast sequences were selected from NCBI (Accession numbers NC_001284 and NC_000932). Probes are tiled at an average of 35 base pair resolution, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 base pairs between probes.

Instrument and Software Requirements

GeneChip® Scanner 3000 7G
GeneChip® Operating Software (GCOS) version 1.3 or higher

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ORDERING INFORMATION

Part # Description
900594 GeneChip® Arabidopsis Tiling 1.0R Array
contains 6 arrays
 
How to order products from Affymetrix.
 
Pricing Information
RELATED PRODUCTS
Control Oligo B2, 3nM
WT Double-Stranded DNA Terminal Labeling Kit
WT Double-Stranded cDNA Synthesis Kit
Tiling Array Tools
Integrated Genome Browser (IGB)
SUPPORT
ChIP-on-chip (pdf, 487 KB)
Arabidopsis Tiling 1.0R Array (zip, 120 MB)
Chromatin Immunoprecipitation Assay Protocol (pdf, 679 KB)
View More...
Arabidopsis Tiling 1.0R Array (pdf, 249 KB)
Tiling Analysis Software Tutorial
ADDITIONAL SUPPORT
Fluidics Scripts
Sample transcript mapping data with the Arabidopsis Tiling 1.0R Array (zip, 21 MB)
Scientific Forum, 1st European ChIP-on-chip
Webinar, Human Tiling Array - September 15, 2005
Webinar, Six-part ChIP-on-chip Symposia Series
All Support Materials for Arabidopsis Tiling 1.0R Array
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