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GeneChip Compatible Software
Mapping 10K 2.0 Array
The GeneChip® Human Mapping 10K Array Xba 142 2.0 (GeneChip® Mapping 10K 2.0 Array) enables researchers to genotype more than 10,000 SNPs in a single experiment with one primer. The GeneChip Mapping 10K 2.0 Array contains equivalent content and performance as the original GeneChip Mapping 10K Array, but advances in photolithographic technology enable it to be produced in a smaller, more cost-efficient format.

The major benefits of the Mapping 10K 2.0 Array include:

Requires only 250 ng of genomic DNA per sample
Easy-to-use, proven assay that has been validated in nearly 250 publications (pdf, 159 KB)
10,000 SNPs provide higher information content for better results
Extensive SNP annotation in the NetAffx™ Analysis Center
Export data in MERLIN- and GeneHunter-compatible formats
Additional coverage on chromosomes 19 and X, as compared to the original Mapping 10K Array

Applications of the Mapping 10K 2.0 Array include:

Linkage analysis: 10,000 SNPs provide more information for better results. Find linkage regions missed by microsatellite analysis.
Cancer genetics: detect chromosomal amplification, deletion, and genotypes in a single experiment
Population Genetics: measure allele frequency distributions between populations with thousands of markers
Comparison of genome coverage between 10,204 SNPs on Mapping 10K 2.0 with 400 microsatellite markers

If you'd like to search for SNPs by genomic location, use the NetAffx™ Analysis Center UCSC Genomic Query Tool

Instrument and Software Requirements

GeneChip® Operating Software (GCOS)
GeneChip® Genotyping Analysis Software (GTYPE)
GeneChip® Fluidics Station 400 or Fluidics Station 450/250
GeneChip® Hybridization Oven
GeneChip® Scanner 3000

Learn more about:

The GeneChip® Mapping 100K Set
The new GeneChip® Mapping 500K Array Set
For more information, please review the data sheet (pdf, 217 KB).
ORDERING INFORMATION

GeneChip® Mapping 10K 2.0 Array and Assay Kit
Part # Description
900540 GeneChip® Human Mapping 10K Array Xba 142 2.0
contains 30 arrays
900441 GeneChip® Mapping 10K Xba Assay Kit
sufficient for 30 reactions
900534 PCR Primer 001
sufficient for 100 reactions
 
How to order products from Affymetrix.
 
Pricing Information
RELATED PRODUCTS
GeneChip® Human Mapping 100K Set
GeneChip® Operating Software (GCOS)
GeneChip® Genotyping Analysis Software
(GTYPE - support materials only)
SUPPORT
Microarrays in Cancer Research (pdf, 423 KB)
Human Mapping 10K Array Xba 142 2.0 (pdf, 217 KB)
DNA Analysis Arrays
Mapping 10K 2.0 Array (zip, 9.1 MB)
10K 2.0 Mapping Assay Manual (pdf, 1.2 MB)
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Human Mapping 10K 2.0 Xba Assay Kit (pdf, 41 KB)
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ADDITIONAL SUPPORT
Fluidics Scripts
Mapping 10K 2.0 Reference Genotype Calls (zip, 3.5 MB)
Probe Set Data in Tabular Format
All Support Materials for Mapping 10K 2.0 Array
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