GeneChip® S. aureus Genome Arrayは、S. aureus塩基配列の相対的なmRNA量を広範にモニタリングできるマイクロアレイです。
GeneChip® S. aureus Genome Arrayは、以下のStaphylococcus aureus 4株の塩基配列の発現解析に有用なツールです。
-
N315 (National Institute of Technology and Evaluation, Japan)
-
Mu50 (National Institute of Technology and Evaluation, Japan)
-
NCTC 8325 (University of Oklahoma)
-
COL (TIGR)
-
このアレイには 3,300 を超えるS. aureusのopen reading frameに対するプローブセットが含まれています。また、 S. aureus ゲノム全体にわたる 4,800 以上の遺伝子間領域の forward および reverse 、両方向を調べられるプローブも含んでいます。
FAQs
Manuals
Probe Set Data in MAGE-ML Format
Alignment, Annotation, and Sequence Files
Information about using Alignment, Annotation, and Sequence files
Current NetAffx Annotation Files
S_aureus Annotations, CSV format, Release 32 (715 KB, 6/9/11)
S_aureus Annotations, MAGE-ML XML Format, Release 32 (5.4 MB, 6/9/11)
S_aureus BLASTP annotations, CSV Format, Release 31 (662 KB, 8/11/10)
Note: NetAffx annotation files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probe sets of interest. Annotation CSV files for the exon arrays are split into a probe set-level annotation file and a transcript cluster-level annotation file; exon array CSV files are compatible with ExACT.
Sequence Files
Saureus Consensus Sequences, FASTA (1.3 MB, 8/20/08)
Saureus Control Sequences, FASTA (53 KB, 2/6/04)
S_aureus Probe Sequences, FASTA (2.1 MB, 8/20/08)
S_aureus Probe Sequences, Tabular (1.9 MB, 8/20/08)
Saureus Target Sequences, FASTA (1.2 MB, 8/20/08)
Archived NetAffx Annotation Files
S_aureus Annotations, BLASTP, Release 20 (643 KB, 7/14/06)
S_aureus Annotations, CSV format, Release 21 (661 KB, 5/31/07)
S_aureus Annotations, CSV format, Release 22 (596 KB, 5/31/07)
S_aureus Annotations, CSV format, Release 23 (676 KB, 7/12/07)
S_aureus Annotations, CSV format, Release 24 (646 KB, 11/6/07)
S_aureus Annotations, CSV format, Release 25 (811 KB, 3/18/08)
S_aureus Annotations, CSV format, Release 26 (640 KB, 7/8/08)
S_aureus Annotations, CSV format, Release 27 (762 KB, 11/30/08)
S_aureus Annotations, CSV format, Release 28 (763 KB, 3/12/09)
S_aureus Annotations, CSV format, Release 29 (764 KB, 7/1/09)
S_aureus Annotations, CSV format, Release 30 (768 KB, 11/15/09)
S_aureus Annotations, CSV format, Release 31 (766 KB, 8/11/10)
S_aureus Annotations, CSV, Release 20 (651 KB, 5/31/07)
S_aureus Annotations, MAGE-ML XML format, Release 21 (5.1 MB, 6/15/07)
S_aureus Annotations, MAGE-ML XML Format, Release 22 (5.9 MB, 6/15/07)
S_aureus Annotations, MAGE-ML XML Format, Release 23 (6.0 MB, 7/12/07)
S_aureus Annotations, MAGE-ML XML Format, Release 24 (6.0 MB, 11/6/07)
S_aureus Annotations, MAGE-ML XML Format, Release 25 (6.2 MB, 3/18/08)
S_aureus Annotations, MAGE-ML XML Format, Release 26 (6.0 MB, 7/8/08)
S_aureus Annotations, MAGE-ML XML Format, Release 27 (6.2 MB, 11/24/08)
S_aureus Annotations, MAGE-ML XML Format, Release 28 (6.2 MB, 3/12/09)
S_aureus Annotations, MAGE-ML XML Format, Release 29 (6.2 MB, 7/1/09)
S_aureus Annotations, MAGE-ML XML Format, Release 30 (6.2 MB, 11/15/09)
S_aureus Annotations, MAGE-ML XML Format, Release 31 (6.2 MB, 8/11/10)
S_aureus BLASTP annotations, CSV Format, Release 22 (662 KB, 3/9/07)
S_aureus BLASTP annotations, CSV Format, Release 23 (662 KB, 7/12/07)
S_aureus BLASTP annotations, CSV Format, Release 24 (662 KB, 11/6/07)
S_aureus BLASTP annotations, CSV Format, Release 25 (662 KB, 3/18/08)
S_aureus BLASTP annotations, CSV Format, Release 26 (662 KB, 7/8/08)
S_aureus BLASTP annotations, CSV Format, Release 27 (662 KB, 11/24/08)
S_aureus BLASTP annotations, CSV Format, Release 28 (663 KB, 3/4/09)
S_aureus BLASTP annotations, CSV Format, Release 29 (662 KB, 7/1/09)
S_aureus BLASTP annotations, CSV Format, Release 30 (662 KB, 11/16/09)
