
※この製品は2010年12月22日をもって販売終了となりました。
GeneChip® Human Mapping 100K Set は、ますます充実するコピー数解析製品ラインナップのひとつです。この製品は、実績があり使いやすいGeneChip® Mapping Assayを用いて、最高レベルの分解能でのコピー数解析が可能な2枚のアレイセットで構成されています。26kbの平均マーカー間距離により、ゲノムカバー領域は最大となり、染色体コピー数変化の検出力も向上します。本製品は、コピー数とアリル特異的な情報の両方を提供できる唯一のテクノロジーで、コピーニュートラルな変化の発見を可能にします。
GeneChip® Mapping 100K Setは、集団遺伝学、連鎖不均衡解析、全ゲノムアソシエーションスタディなどの他のアプリケーションにも利用されてきました。新しいGeneChip® Mapping 500K Array Setは、遺伝的個人差を解析できる能力がより高く、これらのアプリケーションに推奨される製品です。
特長
- 1回の実験でコピー数とアリル特異的な情報が得られます。
- 最高レベルの分解能でのコピー数解析が行えます。
- コピー数、ジェノタイプ、発現データを、ゲノムやゲノムアノテーションとの関連で視覚化できます。
- Integrated Genome Browserの詳細は、こちらをご参照ください。
- 実績のあるコピー数解析法です。
- 50報を超えるマッピングアッセイに関する原著論文の一覧は、こちらをご覧ください。
- 公開されている解析ソリューションはますます増えています。
- コピー数に関する解析ソリューションの詳細は、こちらをご参照ください。
解析に必要な機器およびソフトウェア
- GeneChip® Operating Software(GCOS)
- GeneChip® Fluidics Station 400 or Fluidics Station 450/250
- GeneChip® Hybridization Oven 645
- GeneChip® Scanner 3000 with high-resolution scanning patch
詳細については、データシート(日本語pdf, 679KB)をご覧ください。
現在、この製品に関する資料はございません。詳細については、supportjapan@affymetrix.comまでお問合せください。
| Part # | Description | Includes |
|---|---|---|
| 900518 | GeneChip® Human Mapping 50K Array Xba 240 | Contains 30 Mapping 50K Xba Arrays |
| 900523 | GeneChip® Human Mapping 50K Array Hind 240 | Contains 30 Mapping 50K Hind Arrays |
| 900520 | GeneChip® Mapping 50K Xba Assay Kit | Sufficient for 30 reactions |
| 900521 | GeneChip® Mapping 50K Hind Assay Kit | Sufficient for 30 reactions |
| 900807 | GeneChip® Human Mapping 50K Xba Adaptor | Sufficient for 30 reactions |
| 900808 | GeneChip® Human Mapping 50K Hind Adaptor | Sufficient for 30 reactions |
| 900534 | PCR Primer 001 | Sufficient for 100 PCR reactions |
Required Products
| Part # | Description | Includes |
|---|---|---|
| Affymetrix® GeneChip® Command Console® Software | Available Via Download | |
| Affymetrix® Genotyping Console Software | Available Via Download | |
| 00-0079 | GeneChip® Fluidics Station 400 or Fluidics Station 450/250 | |
| 800138 | GeneChip® Hybridization Oven | |
| 00-0186 | GeneChip® Scanner 3000 with high-resolution scanning patch |
Related Products
| Part # | Description | Includes |
|---|---|---|
| 901153 | Genome-Wide Human SNP Array 6.0 |
FAQs
Manuals
100K Mapping Assay Manual (pdf, 1.2 MB)
Probe Set Data in MAGE-ML Format
Sample Data
Mapping 100k HapMap Trio Dataset
Material Safety Data Sheets
Mapping 100K Array Set, Hind Array (zip, 288 KB)
Mapping 100K Array Set, Xba Array (zip, 288 KB)
Library Files
Mapping 50K Hind 240 Array (zip, 16 MB)
Mapping 50K Xba 240 Array (zip, 17 MB)
Package Inserts
Human Mapping 50K Array Xba 240 and Human Mapping 50K Array Hind 240 (pdf, 71 KB)
Human Mapping 50K Xba Assay kit and Human Mapping 50K Hind Assay Kit (pdf, 43 KB)
Alignment, Annotation, and Sequence Files
Information about using Alignment, Annotation, and Sequence files
Current NetAffx Annotation Files
Mapping50K_Hind240 Annotations, CSV format, Release 32 (11 MB, 7/15/11)
Mapping50K_Xba240 Annotations, CSV format, Release 32 (12 MB, 7/15/11)
Mapping50K_Hind240 Annotations, GDAS3, Release 20 (15 MB, 6/27/05)
Mapping50K_Xba240 Annotations, GDAS3, Release 20 (16 MB, 6/27/05)
Mapping50K_Hind240 Annotations, GTYPE Format, Release 21 (12 MB, 1/2/07)
Mapping50K_Xba240 Annotations, GTYPE Format, Release 21 (13 MB, 1/2/07)
Mapping50K_Xba240,Mapping50K_Hind240 Annotations, SQLite Format, Release 32 (33 MB, 6/24/11)
Mapping50K_Hind240 GC Content Data, NCBI Build 36, TSV Format, Release 21 (806 KB, 1/2/07)
Mapping50K_Xba240 GC Content Data, NCBI Build 36, TSV Format, Release 21 (895 KB, 1/2/07)
Note: NetAffx annotation files are intended for use in automated analysis. Some are not compatible with all spreadsheet applications. Please use the NetAffx Analysis Center to limit download data to your probe sets of interest. Annotation CSV files for the exon arrays are split into a probe set-level annotation file and a transcript cluster-level annotation file; exon array CSV files are compatible with ExACT.
Sequence Files
Mapping50K_Hind240 Flanking Sequences, FASTA (1.2 MB, 8/20/08)
Mapping50K_Xba240 Flanking Sequences, FASTA (1.3 MB, 8/20/08)
Mapping50K_Hind240 Probe Sequences, Tabular (11 MB, 8/20/08)
Mapping50K_Xba240 Probe Sequences, Tabular (12 MB, 8/20/08)
Archived NetAffx Annotation Files
Mapping50K_Hind240 Annotations, CSV format, Release 21 (10 MB, 1/29/07)
Mapping50K_Xba240 Annotations, CSV format, Release 21 (11 MB, 1/29/07)
Mapping50K_Hind240 Annotations, CSV format, Release 22 (11 MB, 3/9/07)
Mapping50K_Xba240 Annotations, CSV format, Release 22 (11 MB, 3/9/07)
Mapping50K_Hind240 Annotations, CSV format, Release 23 (11 MB, 7/12/07)
Mapping50K_Xba240 Annotations, CSV format, Release 23 (12 MB, 7/12/07)
Mapping50K_Hind240 Annotations, CSV format, Release 24 (10 MB, 11/28/07)
Mapping50K_Xba240 Annotations, CSV format, Release 24 (11 MB, 11/28/07)
Mapping50K_Hind240 Annotations, CSV format, Release 25 (12 MB, 3/19/08)
Mapping50K_Xba240 Annotations, CSV format, Release 25 (12 MB, 3/19/08)
Mapping50K_Hind240 Annotations, CSV format, Release 26 (12 MB, 7/9/08)
Mapping50K_Xba240 Annotations, CSV format, Release 26 (12 MB, 7/9/08)
Mapping50K_Hind240 Annotations, CSV format, Release 27 (11 MB, 11/25/08)
Mapping50K_Xba240 Annotations, CSV format, Release 27 (11 MB, 11/25/08)
Mapping50K_Hind240 Annotations, CSV format, Release 28 (11 MB, 3/6/09)
Mapping50K_Xba240 Annotations, CSV format, Release 28 (12 MB, 3/6/09)
Mapping50K_Hind240 Annotations, CSV format, Release 29 (9.9 MB, 7/8/09)
Mapping50K_Xba240 Annotations, CSV format, Release 29 (10 MB, 7/8/09)
Mapping50K_Hind240 Annotations, CSV format, Release 30 (11 MB, 11/15/09)
Mapping50K_Xba240 Annotations, CSV format, Release 30 (11 MB, 11/15/09)
Mapping50K_Hind240 Annotations, CSV format, Release 31 (11 MB, 8/30/10)
Mapping50K_Xba240 Annotations, CSV format, Release 31 (11 MB, 8/30/10)
Mapping50K_Hind240 Annotations, CSV, Release 20 (10 MB, 6/15/06)
Mapping50K_Xba240 Annotations, CSV, Release 20 (10 MB, 6/15/06)
Mapping50K_Hind240 Annotations, GTYPE, Release 20 (11 MB, 3/9/06)
Mapping50K_Xba240 Annotations, GTYPE, Release 20 (11 MB, 3/9/06)
Mapping50K_Xba240,Mapping50K_Hind240 Annotations, SQLite Format, Release 24 (29 MB, 10/13/09)
Mapping50K_Hind240,Mapping50K_Xba240 Annotations, SQLite Format, Release 25 (33 MB, 10/13/09)
Mapping50K_Hind240,Mapping50K_Xba240 Annotations, SQLite Format, Release 26 (33 MB, 10/13/09)
Mapping50K_Hind240,Mapping50K_Xba240 Annotations, SQLite Format, Release 27 (31 MB, 10/13/09)
Mapping50K_Hind240,Mapping50K_Xba240 Annotations, SQLite Format, Release 28 (31 MB, 10/13/09)
Mapping50K_Hind240,Mapping50K_Xba240 Annotations, SQLite Format, Release 29 (27 MB, 10/13/09)
Mapping50K_Xba240,Mapping50K_Hind240 Annotations, SQLite Format, Release 30 (30 MB, 11/15/09)
Mapping50K_Xba240,Mapping50K_Hind240 Annotations, SQLite Format, Release 31 (31 MB, 8/30/10)
Additional Support
Mapping 50K Hind Reference DNA Concordance (zip, 3.5 MB)
Mapping 50K Hind Reference Genotype Calls (zip, 152 KB)
Mapping 50K Xba Reference DNA Concordance (zip, 3.5 MB)
Mapping 50K Xba Reference Genotype Calls (zip, 157 KB)



