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Axiom® myDesign™ Genotyping Arrays for Agrigenomics

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Create your own genotyping panel for marker-trait association, genomic selection and screening. Custom arrays can be designed with multiple species on a single array.

Part # Description Unit Size
000870
Axiom® 384HT myDesign™ Custom Array
• Includes one 384-array plate containing between 1,500 and 50,000 markers
• Minimum order size of 1920 samples   
000842
000918 (1x24)
Axiom® myDesign™ TG Array, 1K-90K
Includes one array plate containing between 1,000 and 90,000 markers
– 1x96 configuration and 1x 24 configuration
– Minimum order size of 480 samples   
000799
000919 (1x24)
Axiom® myDesign™ TG Array, 90K-200K
• Includes one array plate containing between 90,000 and 200,000 markers
• 1x96 configuration and 1x 24 configuration
• Minimum order size of 480 samples   
000780
000920 (1x24)
Axiom® myDesign™ GW Array Plate, 200K-675K
• Includes one array plate containing between 200,000 and 675,000 markers
• 1x96 configuration and 1 x 24 configuration
• Minimum order size of 480 samples   
000786
Axiom® myDesign™ GW Array Plate, 675K-1.3M
• Includes one 96-array plate containing between 675,000 and 1.3 million markers
• 2x48 configuration
• Minimum order size of 480 samples   
000794
Axiom® myDesign™ GW Array Plate, 1.3M-2.0M
• Includes one 96-array plate containing between 1.3 million and 2 million markers
• 3x32 configuration
• Minimum order size of 480 samples   
000787
Axiom® myDesign™ GW Array Plate, 2.0M-2.6M
• Includes one 96-array plate containing between 2.0 million and 2.6 million markers
• 4x24 configuration
• Minimum order size of 480 samples   
901758
Axiom® 2.0 Reagent Kit
Includes all reagents (except isopropanol) to process 96 reactions/plate   
902798
Axiom® 2.0 Reagent Kit 4x24 Reactions
Includes all reagents (except isopropanol) to process 4 x 24 array plates   
902245
Axiom 2.0 384HT Reagent Kit
Includes all reagents to process one Axiom 384HT Array Plate   
901606
Axiom® GeneTitan® Consumables Kit
Contains all GeneTitan® consumables required to process one Axiom Array Plate   
902234
Axiom® 384HT GeneTitan Consumables Kit
Includes consumables required to process one Axiom 384-Array Plate on the GeneTitan Instrument   
902289
Axiom® 384HT Consumables Kit for QC
Includes all consumables required for QC of ten Axiom 384-Array Plates   
902288
Axiom® 384HT Consumables Kit for Biomek® FXp
Includes consumables required for target prep on the Biomek FXp for five Axiom 384-Array Plates   

The Expert Design Program, facilitated by Affymetrix, enables a consortium of researchers to design genotyping arrays for their species of interest with de novo SNPs or SNPs from the Axiom® Genomic Database. Consortia members interested in developing a new array can request a design consultation by contacting Affymetrix at Bioinformatics_Services@affymetrix.com.

With Axiom® myDesign™ Genotyping Arrays, you can create fully customizable genotyping array panels for genome-wide association, replication, fine mapping, and candidate gene studies. Based on the universal workflow of the Axiom® Genotyping Solution, Axiom myDesign Arrays offer unprecedented scale and flexibility to design the most optimal array for your species of interest.

Create fully or semi-customized arrays containing 1,500 to 2.6 million markers. An example template showing SNP submission can be found here.

 

Axiom myDesign Custom Arrays feature:

  • Low minimums – Custom arrays for as few as 480 samples; small repeat orders at attractive prices
  • Flexible content – Fully customizable panels focused on your SNPs of interest; multiple species on one array supported
  • Consistent supply – Get 100% identical SNP content at any time and for as long as your research necessitates
  • Guaranteed precision – Every SNP is manufactured with a high degree of precision using photolithographic templates
  • More marker selection freedom – Interfering SNPs can be as close as 10 bases from candidate SNPs
  • Cost effective – High return on investment; attractive pricing without requiring large consortium volumes

 

Axiom myDesign Arrays are available in formats suitable for the appropriate number of markers:

  • Axiom® 384HT myDesign™ Custom Arrays – 1,500 to 50,000 markers per array. 384 arrays per plate
  • Axiom® myDesign™ Targeted Genotyping (TG) Arrays – 1,500 to 200,000 markers per array for targeted genotyping in applications in genotype-trait association, genomic selection, and screening; 96 or 24 arrays per plate
  • Axiom® myDesign™ Genome-Wide (GW) Arrays – 200,000 to 2.6 million SNPs for validation and genome-wide association studies; 96 or 24 arrays per plate; multiple array designs can be used for large studies

Multiplexing

AxiomBioFx Services

 

Axiom myDesign Genotyping Arrays include:

  • Axiom® 2.0 Reagent Kit for automated or manual processing of up to 96 samples or Axiom 2.0 384HT Reagent Kit for processing 384 samples
  • A fully automated workflow with validated robotics methods for target preparation and array processing based on the Beckman Biomek® FXP Target Prep Express System and GeneTitan® MC Instrument
  • A manual target preparation protocol for lower-throughput users.
    Axiom™ Analysis Suite for automated allele calling and easier quality assessment of called genotypes in diploid and polyploid species. Genotyping Console Software comes with the R-based SNPolisher™ Software which provides easy classification of the clusters observed in your data and identifying markers that can be used in breeding and QTL discovery

 

For Research Use Only. Not for use in diagnostic procedures.

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