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Human Mapping 100K Set, Made to Order

This product is no longer available, please search for a replacement on thermofisher.com.

The GeneChip® Human Mapping 100K Set is part of a growing family of products for copy number analysis.

Part # Description Unit Size
520043
GeneChip Human Mapping 50K Array Xba 240, MTO
contains 49 arrays (1 wafer)   
520044
GeneChip Human Mapping 50K Array Hind 240, MTO
contains 49 arrays (1 wafer)   
900520
GeneChip Mapping 50K Xba Assay Kit, MTO
min order 2,500 reactions (1 lot)   
900521
GeneChip Mapping 50K Hind Assay Kit, MTO
min order 2,500 reactions (1 lot)   
900807
GeneChip Human Mapping 50K Xba Adaptor, MTO
min order 2,500 reactions (1 lot)   
900808
GeneChip Human Mapping 50K Hind Adaptor, MTO
min order 2,500 reactions (1 lot)   
900534
PCR Primer 001, MTO
min order 2,500 reactions (1 lot)   

The 100K Array Set and reagents are now made to order (MTO) products. As a result, please allow up to 10 weeks for your reagents and up to six weeks for the array.

 

Human Mapping 100K Set

The GeneChip® Human Mapping 100K Set is part of a growing family of products for copy number analysis. It is comprised of a set of two arrays that provide the highest resolution copy number analysis using the proven, easy-to-use GeneChip® Mapping Assay. With a mean marker distance of 26 kb, the Mapping 100K Set provides the highest genomic coverage, giving researchers more power to detect changes in chromosomal copy number. The Mapping 100K Set is the only technology to provide both copy number and allele-specific information, allowing researchers to discover copy neutral changes.



View coverage of 100,000 SNPs
100,000 SNPs

The GeneChip Mapping 100K Set has also been used for other applications, including population genetics, linkage disequilibrium analysis, and whole-genome association studies. The new GeneChip® Mapping 500K Array Set provides more power to understand the genetic differences between individuals, and is the recommended product for these applications.

Benefits of the Mapping 100K Set

  • Copy number and allele-specific information from a single experiment
  • Highest resolution analysis for copy number
  • Visualize copy number, genotype, and expression data within the context of the genome and gene annotations
  • Proven approach for copy number analysis
  • Growing family of publicly available analysis solutions

For research use only. Not for use in diagnostic procedures.

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Application Notes

Microarrays in Cancer Research (pdf, 423 KB)

Data Sheets

Human Mapping 100K Set (pdf, 172 KB)

Affymetrix Solutions for Cancer Analysis (pdf, 367 KB)

Library Files

Mapping 50K Hind 240 Array (zip, 16 MB)

Mapping 50K Xba 240 Array (zip, 17 MB)

Manuals

100K Mapping Assay Manual (pdf, 1.2 MB)

Probe Set Data in MAGE-ML Format

Package Inserts

Human Mapping 50K Array Xba 240 and Human Mapping 50K Array Hind 240 (pdf, 71 KB)

Human Mapping 50K Xba Assay kit and Human Mapping 50K Hind Assay Kit (pdf, 43 KB)

Protocol, Long

Human Mapping 100K Set

Safety Data Sheets

Mapping 100K Array Set, Xba Array (zip, 288 KB)

Mapping 100K Array Set, Hind Array (zip, 288 KB)

Sample Data

Mapping 100k HapMap Trio Dataset

Other

Fluidics Scripts

Mapping 50K Hind Reference DNA Concordance (zip, 3.5 MB)

Mapping 50K Hind Reference Genotype Calls (zip, 152 KB)

Mapping 50K Xba Reference DNA Concordance (zip, 3.5 MB)

Mapping 50K Xba Reference Genotype Calls (zip, 157 KB)

NetAffx Annotation Files

Mapping50K_Xba240 Annotations, SQLite Format, Release 32 (35 MB 06/24/11)

Mapping50K_Xba240 GTC Genome Browser File, Release 32 (26 MB 06/15/11)

Mapping50K_Xba240 Annotations, CSV format, Release 31 (12 MB 08/30/10)

Mapping50K_Hind240 Annotations, SQLite Format, Release 31 (33 MB 08/30/10)

Mapping50K_Xba240 Annotations, SQLite Format, Release 31 (33 MB 08/30/10)

Mapping50K_Hind240 Annotations, CSV format, Release 31 (12 MB 08/30/10)

Mapping50K_Hind240 GTC Genome Browser File, Release 31 (24 MB 12/14/10)

Mapping50K_Xba240 GTC Genome Browser File, Release 31 (24 MB 12/14/10)

Mapping50K_Hind240 Annotations, SQLite Format, Release 32 (35 MB 06/24/11)

Mapping50K_Xba240 Annotations, CSV format, Release 32 (13 MB 07/15/11)

Mapping50K_Hind240 Annotations, GDAS3, Release 20 (16 MB 06/27/05)

Mapping50K_Xba240 Annotations, GDAS3, Release 20 (17 MB 06/27/05)

Mapping50K_Hind240 Annotations, GTYPE Format, Release 21 (13 MB 01/02/07)

Mapping50K_Xba240 Annotations, GTYPE Format, Release 21 (14 MB 01/02/07)

Mapping50K_Hind240 Annotations, CSV format, Release 30 (12 MB 11/15/09)

Mapping50K_Xba240 Annotations, CSV format, Release 30 (12 MB 11/15/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 30 (32 MB 11/15/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 30 (32 MB 11/15/09)

Mapping50K_Hind240 GTC Genome Browser File, Release 32 (26 MB 06/15/11)

Mapping50K_Hind240 Annotations, CSV format, Release 32 (12 MB 07/15/11)

Sequence Files

Mapping50K_Hind240 Flanking Sequences, FASTA (1 MB 08/20/08)

Mapping50K_Hind240 Probe Sequences, Tabular (12 MB 08/20/08)

Mapping50K_Xba240 Flanking Sequences, FASTA (1 MB 08/20/08)

Mapping50K_Xba240 Probe Sequences, Tabular (13 MB 08/20/08)

Archived NetAffx Annotation Files

Mapping50K_Xba240 GTC Genome Browser File (23 MB 03/12/10)

Mapping50K_Xba240 GTC Genome Browser File, Release 29 (22 MB 08/12/09)

Mapping50K_Xba240 GTC Genome Browser File, Release 28 (22 MB 05/04/09)

Mapping50K_Xba240 GTC Genome Browser File, Release 30.2 (23 MB 05/21/10)

Mapping50K_Hind240 GTC Genome Browser File, Release 28 (22 MB 05/04/09)

Mapping50K_Hind240 GTC Genome Browser File (23 MB 03/12/10)

Mapping50K_Hind240 GTC Genome Browser File, Release 29 (22 MB 08/12/09)

Mapping50K_Hind240 Annotations, CSV, Release 20 (11 MB 06/15/06)

Mapping50K_Hind240 Annotations, GTYPE, Release 20 (12 MB 03/09/06)

Mapping50K_Xba240 Annotations, CSV, Release 20 (11 MB 06/15/06)

Mapping50K_Xba240 Annotations, GTYPE, Release 20 (12 MB 03/09/06)

Mapping50K_Xba240 Annotations, SQLite Format, Release 29 (28 MB 10/13/09)

Mapping50K_Hind240 Annotations, CSV format, Release 21 (11 MB 01/29/07)

Mapping50K_Xba240 Annotations, CSV format, Release 21 (12 MB 01/29/07)

Mapping50K_Hind240 Annotations, CSV format, Release 22 (12 MB 03/09/07)

Mapping50K_Xba240 Annotations, CSV format, Release 22 (12 MB 03/09/07)

Mapping50K_Hind240 Annotations, CSV format, Release 23 (12 MB 07/12/07)

Mapping50K_Xba240 Annotations, CSV format, Release 23 (13 MB 07/12/07)

Mapping50K_Hind240 Annotations, CSV format, Release 24 (11 MB 11/28/07)

Mapping50K_Xba240 Annotations, CSV format, Release 24 (12 MB 11/28/07)

Mapping50K_Hind240 Annotations, CSV format, Release 25 (13 MB 03/19/08)

Mapping50K_Xba240 Annotations, CSV format, Release 25 (13 MB 03/19/08)

Mapping50K_Hind240 Annotations, CSV format, Release 26 (13 MB 07/09/08)

Mapping50K_Xba240 Annotations, CSV format, Release 26 (13 MB 07/09/08)

Mapping50K_Hind240 Annotations, SQLite Format, Release 29 (28 MB 10/13/09)

Mapping50K_Hind240 Annotations, CSV format, Release 27 (12 MB 11/25/08)

Mapping50K_Xba240 Annotations, CSV format, Release 27 (12 MB 11/25/08)

Mapping50K_Hind240 Annotations, CSV format, Release 28 (12 MB 03/06/09)

Mapping50K_Xba240 Annotations, CSV format, Release 28 (13 MB 03/06/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 24 (31 MB 10/13/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 24 (31 MB 10/13/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 28 (33 MB 10/13/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 28 (33 MB 10/13/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 27 (33 MB 10/13/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 27 (33 MB 10/13/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 26 (35 MB 10/13/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 26 (35 MB 10/13/09)

Mapping50K_Hind240 Annotations, SQLite Format, Release 25 (35 MB 10/13/09)

Mapping50K_Xba240 Annotations, SQLite Format, Release 25 (35 MB 10/13/09)

Mapping50K_Hind240 Annotations, CSV format, Release 29 (10 MB 07/08/09)

Mapping50K_Xba240 Annotations, CSV format, Release 29 (11 MB 07/08/09)

Mapping50K_Xba240 GTC Genome Browser File (23 MB 03/12/10)

Mapping50K_Xba240 GTC Genome Browser File, Release 29 (22 MB 08/12/09)

Mapping50K_Xba240 GTC Genome Browser File, Release 28 (22 MB 05/04/09)

Mapping50K_Hind240 GTC Genome Browser File, Release 30.2 (23 MB 05/21/10)

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