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GeneChip Zebrafish Genome Array

The Affymetrix GeneChip Zebrafish Genome Array can be used to study gene expression of over - 14.900 Danio rerio transcripts.

Part # Description Unit Size Your Price (USD)
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900487
GeneChip Zebrafish Genome Array
contains 5 arrays    Please Inquire
900488
GeneChip Zebrafish Genome Array
contains 30 arrays    Please Inquire
     

The Affymetrix GeneChip® Zebrafish Genome Array can be used to study gene expression of over - 14.900 Danio rerio transcripts. Sequence information for this array was selected from the following public data sources: RefSeq (July 2003), GenBank­ (release -36.0, June 2003), dbEST (July 2003), and UniGene (Build 54, June 2003). Probe sets on the array were designed with -6 oligonucleotide pairs to detect each transcript.

This array was designed in collaboration with representative members of the Zebrafish community and the National Institutes of Health.

Note: The DsRed probe set is provided with permission from BD Biosciences, and BD Biosciences grants users a limited license to utilize this probe set only on the Affymetrix array. Other uses of the probe set, or other DsRed sequence or sequences requires a license from BD Biosciences.

For research use only. Not for use in diagnostic procedures.

This array was designed in collaboration with representative members of the Zebrafish community and the National Institutes of Health.

Note: The DsRed probe set is provided with permission from BD Biosciences, and BD Biosciences grants users a limited license to utilize this probe set only on the Affymetrix array. Other uses of the probe set, or other DsRed sequence or sequences requires a license from BD Biosciences.

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Data Sheets

Zebrafish Genome Array (pdf, 605 KB)

Library Files

Zebrafish Genome Array (zip, 12 MB)

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Probe Set Data in MAGE-ML Format

3' IVT Express Kit User Manual (pdf, 1.6 MB)

HT 3' IVT Express Kit (pdf 5.93 MB)

Package Inserts

Zebrafish Genome Array (pdf, 491 KB)

Protocol, Long

Gene Expression Arrays

Other

Fluidics Scripts

NetAffx Alignment Files

Zebrafish Alignments To Genome, PSL Format (2 MB 09/15/08)

NetAffx Annotation Files

Zebrafish Annotations, MAGE-ML XML Format, Release 32 (25 MB 06/09/11)

Zebrafish BLASTP annotations, CSV Format, Release 32 (61 KB 06/09/11)

Zebrafish BLASTP annotations, CSV Format, Release 31 (30 KB 08/11/10)

Zebrafish Orthologs/Homologs, CSV Format, Release 31 (4 MB 08/11/10)

Zebrafish Orthologs/Homologs, CSV Format, Release 32 (4 MB 06/09/11)

Zebrafish Annotations, CSV format, Release 31 (4 MB 08/11/10)

Zebrafish Annotations, CSV format, Release 32 (4 MB 06/10/11)

Zebrafish Annotations, CSV format, Release 30 (4 MB 11/15/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 30 (24 MB 11/15/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 30 (4 MB 11/15/09)

Zebrafish BLASTP annotations, CSV Format, Release 30 (27 KB 11/16/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 31 (24 MB 08/11/10)

Sequence Files

Zebrafish Consensus Sequences, FASTA (5 MB 08/20/08)

Zebrafish Control Sequences, FASTA (45 KB 02/05/04)

Zebrafish Probe Sequences, FASTA (5 MB 08/20/08)

Zebrafish Probe Sequences, Tabular (4 MB 08/20/08)

Zebrafish Target Sequences, FASTA (3 MB 08/20/08)

Archived NetAffx Alignment Files

Zebrafish Alignments To Genome, PSL Format (2 MB 11/17/06)

Archived NetAffx Annotation Files

Zebrafish Annotations, MAGE-ML XML, Release 20 (18 MB 06/15/07)

Zebrafish Annotations, CSV, Release 20 (3 MB 05/31/07)

Zebrafish Annotations, CSV format, Release 21 (4 MB 05/31/07)

Zebrafish Annotations, MAGE-ML XML format, Release 21 (17 MB 06/15/07)

Zebrafish BLASTP annotations, CSV format, Release 21 (116 KB 11/15/06)

Zebrafish Annotations, CSV format, Release 22 (4 MB 05/31/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 22 (17 MB 06/15/07)

Zebrafish BLASTP annotations, CSV Format, Release 22 (112 KB 03/09/07)

Zebrafish Annotations, CSV format, Release 23 (4 MB 07/12/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 23 (17 MB 07/12/07)

Zebrafish BLASTP annotations, CSV Format, Release 23 (50 KB 07/12/07)

Zebrafish Annotations, CSV format, Release 24 (4 MB 11/06/07)

Zebrafish Annotations, MAGE-ML XML Format, Release 24 (21 MB 11/06/07)

Zebrafish BLASTP annotations, CSV Format, Release 24 (23 KB 11/06/07)

Zebrafish Orthologs/Homologs, CSV Format, Release 24 (3 MB 11/06/07)

Zebrafish Annotations, CSV format, Release 25 (3 MB 03/19/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 25 (21 MB 03/19/08)

Zebrafish BLASTP annotations, CSV Format, Release 25 (2 KB 03/18/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 25 (3 MB 03/18/08)

Zebrafish Annotations, CSV format, Release 26 (4 MB 07/08/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 26 (22 MB 07/08/08)

Zebrafish BLASTP annotations, CSV Format, Release 26 (2 KB 07/08/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 26 (3 MB 07/08/08)

Zebrafish Annotations, CSV format, Release 27 (4 MB 11/30/08)

Zebrafish Annotations, MAGE-ML XML Format, Release 27 (22 MB 11/24/08)

Zebrafish BLASTP annotations, CSV Format, Release 27 (24 KB 11/24/08)

Zebrafish Orthologs/Homologs, CSV Format, Release 27 (3 MB 11/24/08)

Zebrafish Annotations, CSV format, Release 28 (4 MB 03/12/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 28 (23 MB 03/12/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 28 (4 MB 03/12/09)

Zebrafish Annotations, CSV format, Release 29 (4 MB 07/01/09)

Zebrafish Annotations, MAGE-ML XML Format, Release 29 (24 MB 07/01/09)

Zebrafish Orthologs/Homologs, CSV Format, Release 29 (3 MB 07/01/09)

Zebrafish BLASTP annotations, CSV Format, Release 29 (28 KB 07/01/09)

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