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GeneChip Tomato Genome Array

Learn more about the GeneChip Tomato Genome Array

Part # Description Unit Size Your Price (USD)
Qty
900737
GeneChip Tomato Genome Array
contains 2 arrays    Please Inquire
900738
GeneChip Tomato Genome Array
contains 6 arrays    Please Inquire
900739
GeneChip Tomato Genome Array
contains 30 arrays    Please Inquire
     

Tomato is an important food crop worldwide, and the GeneChip® Tomato Genome Array is designed specifically to monitor gene expression in tomato (Lycopersicon esculentum). The comprehensive array consists of over 10,000 L. esculentum probe sets to interrogate over 9,200 L. esculentum transcripts. The Tomato Genome Array is particularly useful for agriculture researchers studying tomato genetics.

This array was created in collaboration with leading tomato researchers through the Affymetrix GeneChip® Consortia Program. Sequence information for this array was selected from public data sources including Lycopersicon esculentum UniGene Build #20 (October 3, 2004) and GenBank® mRNAs up to November 5, 2004.

Instrument Software Requirements


*GeneChip Scanner 3000 High-Resolution Update is standard on all instruments shipped starting in September 2003 with serial number series 502. Previous versions (serial number series 501) will require the 00-0110 GeneChip Scanner 3000 High-Resolution Update to be installed.

For research use only. Not for use in diagnostic procedures.

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Data Sheets

Tomato Genome Array (pdf, 90 KB)

Library Files

Tomato Genome Array (zip, 6.6 MB)

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Probe Set Data in MAGE-ML Format

3' IVT Express Kit User Manual (pdf, 1.6 MB)

HT 3' IVT Express Kit (pdf 5.93 MB)

Package Inserts

Tomato Genome Array (pdf, 491 KB)

Protocol, Long

Gene Expression Arrays

Other

Fluidics Scripts

NetAffx Annotation Files

Tomato Annotations, CSV format, Release 32 (1 MB 06/09/11)

Tomato Annotations, CSV format, Release 31 (1 MB 08/11/10)

Tomato Annotations, MAGE-ML XML Format, Release 31 (7 MB 08/11/10)

Tomato BLASTP annotations, CSV Format, Release 32 (2 KB 06/09/11)

Tomato BLASTP annotations, CSV format, Release 21 (82 KB 11/15/06)

Tomato Annotations, CSV format, Release 30 (1 MB 11/15/09)

Tomato Annotations, MAGE-ML XML Format, Release 30 (7 MB 11/15/09)

Tomato Annotations, MAGE-ML XML Format, Release 32 (7 MB 06/09/11)

Sequence Files

Tomato Consensus Sequences, FASTA (2 MB 08/20/08)

Tomato Control Sequences, FASTA (59 KB 06/21/05)

Tomato Probe Sequences, FASTA (2 MB 08/20/08)

Tomato Probe Sequences, Tabular (2 MB 08/20/08)

Tomato Target Sequences, FASTA (1 MB 08/20/08)

Archived NetAffx Annotation Files

Tomato Annotations, MAGE-ML XML, Release 20 (7 MB 06/15/07)

Tomato Annotations, CSV, Release 20 (1 MB 05/31/07)

Tomato Annotations, BLASTP, Release 20 (90 KB 07/14/06)

Tomato Annotations, CSV format, Release 21 (1 MB 05/31/07)

Tomato Annotations, MAGE-ML XML format, Release 21 (7 MB 06/15/07)

Tomato Annotations, CSV format, Release 22 (2 MB 05/31/07)

Tomato Annotations, MAGE-ML XML Format, Release 22 (8 MB 06/15/07)

Tomato Annotations, CSV format, Release 23 (1 MB 07/12/07)

Tomato Annotations, MAGE-ML XML Format, Release 23 (7 MB 07/12/07)

Tomato Annotations, CSV format, Release 24 (1 MB 11/06/07)

Tomato Annotations, MAGE-ML XML Format, Release 24 (7 MB 11/06/07)

Tomato Annotations, CSV format, Release 25 (2 MB 03/18/08)

Tomato Annotations, MAGE-ML XML Format, Release 25 (7 MB 03/18/08)

Tomato Annotations, CSV format, Release 26 (1 MB 07/08/08)

Tomato Annotations, MAGE-ML XML Format, Release 26 (7 MB 07/08/08)

Tomato Annotations, CSV format, Release 27 (1 MB 11/30/08)

Tomato Annotations, MAGE-ML XML Format, Release 27 (7 MB 11/24/08)

Tomato Annotations, CSV format, Release 28 (1 MB 03/12/09)

Tomato Annotations, MAGE-ML XML Format, Release 28 (7 MB 03/12/09)

Tomato Annotations, CSV format, Release 29 (1 MB 07/01/09)

Tomato Annotations, MAGE-ML XML Format, Release 29 (7 MB 07/01/09)

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