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GeneChip Mouse Tiling 1.1R Array Set

Mouse Tiling 1.1R Array Set is the only commercially available whole-genome array set for mouse transcript mapping.

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GeneChip Mouse Tiling 1.1R Array Set
contains 14 arrays    Please Inquire
     

Most comprehensive whole-genome array set for discovering novel RNA transcripts

  • Only commercially available whole-genome array set for mouse transcript mapping
  • High-density 35-bp probe resolution offers a more accurate view of novel RNA transcripts
  • 25-mer probes offer the most specific hybridization results

Array Profile

The GeneChip® Mouse Tiling 1.1R Array Set is designed for transcript mapping experiments to identify novel mouse RNAs. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the mouse genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions.

Sequences used in the design of the Mouse Tiling 1.1R Array Set were selected from NCBI mouse genome assembly (Build 33). Repetitive elements were removed by RepeatMasker. Probes are tiled at an average resolution of 35 bp, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 bp between probes.

Instrument and Software Requirements


For research use only. Not for use in diagnostic procedures.

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Application Notes

ChIP-on-chip (pdf, 487 KB)

Library Files

Mouse Tiling 1.1R Array Set (zip, 1.56 GB)

GeneChip Tiling Arrays - Data Analysis Library File Updates

Mm35b_M Mouse Genome Tiling 1.0 Array Set NCBIv36 BPMAP files (791 MB 12/14/07)

Manuals

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for human and mouse tiling arrays (pdf, 160 KB)

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for Arabidopsis, C. elegans, Drosophila, and yeast tiling arrays (pdf, 174 KB)

Affymetrix® Chromatin Immunoprecipitation Assay Protocol (pdf, 424 KB)

Package Inserts

Mouse Tiling 1.1R Array Set (pdf, 487 KB)

Safety Data Sheets

WT Double-Stranded cDNA Synthesis Kit (zip, 166 KB)

WT Amplified Double-Stranded cDNA Synthesis Kit (zip, 228 KB)

WT Double-Stranded DNA Terminal Labelling Kit (zip, 158 KB)

Tutorials

Tiling Analysis Software Tutorial

Archived Additional Support

Whole Transcript (WT) Double-Stranded Target Assay (pdf, 751 KB)

Archived Presentations

Webinar, Six-part ChIP-on-chip Symposia Series

Scientific Forum, 1st European ChIP-on-chip

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