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GeneChip Maize Genome Array

The GeneChip Maize Genome Array contains probe sets to detect transcripts from Zea mays, one of the most economically important crops in the world.

Part # Description Unit Size Your Price (USD)
Qty
900614
GeneChip Maize Genome Array
contains 2 arrays    Please Inquire
900615
GeneChip Maize Genome Array
contains 6 arrays    Please Inquire
900616
GeneChip Maize Genome Array
contains 30 arrays    Please Inquire
     

The GeneChip® Maize Genome Array contains probe sets to detect transcripts from Zea mays, one of the most economically important crops in the world. The GeneChip® Maize Genome Array, through examination of gene expression patterns of Zea mays, will enable researches to view the global transcription effects of external stimuli, such as fertilizers, pesticides, and growth conditions.

  • The GeneChip Maize Genome Array provides comprehensive coverage of over 100 cultivars present in NCBI's UniGene data set, including the most highly represented strains: B73, Ohio43, W22, W23, W64A, and Black Mexican Sweet.
  • The Maize Genome Array has 17,555 probe sets to interrogate approximately 14,850 Zea mays transcripts, which represent 13,339 genes (12,113 of which are represented in distinct UniGene clusters).
  • Use the Power of the Probe Set and get multiple independent measurements for each transcript that delivers the greatest accuracy and reproducibility of any microarray platform.
  • GeneChip® System: richer data, sharper insights, better decisions.

Array Profile

The sequence information for this array was selected from NCBI's GenBank® (up to September 29, 2004) and Zea mays UniGene Build 42 (July 23, 2004) databases. Probe sets on the array include 15 oligonucleotide pairs to detect each transcript, for added robustness and to facilitate detection of polymorphisms.

The Maize Genome Array was created within the Affymetrix GeneChip® Consortia Program.

For research use only. Not for use in diagnostic procedures.

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Data Sheets

Maize Genome Array (pdf, 83 KB)

Library Files

Maize Genome Array (zip, 12 MB)

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Probe Set Data in MAGE-ML Format

3' IVT Express Kit User Manual (pdf, 1.6 MB)

HT 3' IVT Express Kit (pdf 5.93 MB)

Package Inserts

Maize Genome Array (pdf, 514 KB)

Protocol, Long

Gene Expression Arrays

Other

Fluidics Scripts

NetAffx Annotation Files

Maize Annotations, CSV format, Release 32 (3 MB 06/09/11)

Maize BLASTP annotations, CSV Format, Release 32 (0 KB 06/09/11)

Maize Annotations, MAGE-ML XML Format, Release 31 (17 MB 08/11/10)

Maize Annotations, CSV format, Release 31 (3 MB 08/11/10)

Maize BLASTP annotations, CSV Format, Release 31 (32 KB 08/11/10)

Maize Annotations, CSV format, Release 30 (3 MB 11/15/09)

Maize Annotations, MAGE-ML XML Format, Release 30 (17 MB 11/15/09)

Maize BLASTP annotations, CSV Format, Release 30 (151 KB 11/16/09)

Maize Annotations, MAGE-ML XML Format, Release 32 (17 MB 06/09/11)

Sequence Files

Maize Consensus Sequences, FASTA (6 MB 08/20/08)

Maize Control Sequences, FASTA (70 KB 01/31/05)

Maize Probe Sequences, FASTA (5 MB 08/20/08)

Maize Probe Sequences, Tabular (4 MB 08/20/08)

Maize Target Sequences, FASTA (3 MB 08/20/08)

Archived NetAffx Annotation Files

Maize Annotations, MAGE-ML XML, Release 20 (16 MB 06/15/07)

Maize Annotations, CSV, Release 20 (3 MB 08/21/06)

Maize Annotations, CSV format, Release 21 (3 MB 05/31/07)

Maize Annotations, MAGE-ML XML format, Release 21 (16 MB 06/15/07)

Maize BLASTP annotations, CSV format, Release 21 (111 KB 11/15/06)

Maize Annotations, CSV format, Release 22 (3 MB 05/31/07)

Maize Annotations, MAGE-ML XML Format, Release 22 (16 MB 06/15/07)

Maize BLASTP annotations, CSV Format, Release 22 (6 KB 03/09/07)

Maize Annotations, CSV format, Release 23 (3 MB 07/12/07)

Maize Annotations, MAGE-ML XML Format, Release 23 (16 MB 07/12/07)

Maize BLASTP annotations, CSV Format, Release 23 (5 KB 07/12/07)

Maize Annotations, CSV format, Release 24 (3 MB 11/06/07)

Maize Annotations, MAGE-ML XML Format, Release 24 (16 MB 11/06/07)

Maize BLASTP annotations, CSV Format, Release 24 (3 KB 11/06/07)

Maize Annotations, CSV format, Release 25 (3 MB 03/18/08)

Maize Annotations, MAGE-ML XML Format, Release 25 (16 MB 03/18/08)

Maize BLASTP annotations, CSV Format, Release 25 (1 KB 03/18/08)

Maize Annotations, CSV format, Release 26 (3 MB 07/08/08)

Maize Annotations, MAGE-ML XML Format, Release 26 (16 MB 07/08/08)

Maize Annotations, CSV format, Release 27 (2 MB 11/30/08)

Maize Annotations, MAGE-ML XML Format, Release 27 (16 MB 11/24/08)

Maize Annotations, CSV format, Release 28 (3 MB 03/12/09)

Maize Annotations, MAGE-ML XML Format, Release 28 (17 MB 03/12/09)

Maize BLASTP annotations, CSV Format, Release 28 (637 KB 03/04/09)

Maize Annotations, CSV format, Release 29 (3 MB 07/01/09)

Maize Annotations, MAGE-ML XML Format, Release 29 (17 MB 07/01/09)

Maize BLASTP annotations, CSV Format, Release 29 (133 KB 07/01/09)

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