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GeneChip Human Tiling 1.0R Array Set

The GeneChip Human Tiling 1.0R Array Set is designed for transcript mapping experiments.

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GeneChip Human Tiling 1.0R Array Set
contains 14 arrays    Please Inquire
     

Most comprehensive whole-genome array set for discovering novel RNA transcripts

  • Only commercially available whole-genome array set for human transcript mapping
  • High density 35-bp probe resolution offers a more accurate view of novel RNA transcripts
  • 25-mer probes offer the most specific hybridization results

Array Profile

The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions.

Sequences used in the design of the Human Tiling 1.0R Array Set were selected from NCBI human genome assembly (Build 34). Repetitive elements were removed by RepeatMasker. Probes are tiled at an average resolution of 35 bp, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 bp between probes.

Instrument and Software Requirements

For research use only. Not for use in diagnostic procedures.

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Application Notes

ChIP-on-chip (pdf, 487 KB)

Data Sheets

Human Tiling Arrays (pdf, 260 KB)

Library Files

Human Tiling 1.0R Array Set (zip, 1 GB)

GeneChip Tiling Arrays - Data Analysis Library File Updates

Hs35b_M Human Genome 2.0 Tiling Array Set NCBIv36 BPMAP files (834 MB 01/16/08)

Manuals

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for human and mouse tiling arrays (pdf, 160 KB)

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for Arabidopsis, C. elegans, Drosophila, and yeast tiling arrays (pdf, 174 KB)

Affymetrix® Chromatin Immunoprecipitation Assay Protocol (pdf, 424 KB)

Package Inserts

Human Tiling 1.0R Array Set (pdf, 487 KB)

Safety Data Sheets

WT Double-Stranded cDNA Synthesis Kit (zip, 166 KB)

WT Amplified Double-Stranded cDNA Synthesis Kit (zip, 228 KB)

WT Double-Stranded DNA Terminal Labelling Kit (zip, 158 KB)

Tutorials

Tiling Analysis Software Tutorial

Archived Additional Support

Whole Transcript (WT) Double-Stranded Target Assay (pdf, 751 KB)

Archived Presentations

Webinar, Six-part ChIP-on-chip Symposia Series

Scientific Forum, 1st European ChIP-on-chip

Archived Library Files

Hs35b_M BPMAP Archive (970 MB 11/17/06)

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