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GeneChip Citrus Genome Array

The GeneChip Citrus Array is designed specifically to monitor gene expression in Citrus.

Part # Description Unit Size Your Price (USD)
Qty
900731
GeneChip Citrus Genome Array
contains 2 arrays    Please Inquire
900732
GeneChip Citrus Genome Array
contains 6 arrays    Please Inquire
900733
GeneChip Citrus Genome Array
contains 30 arrays    Please Inquire
     

The GeneChip® Citrus Genome Array is designed specifically to monitor gene expression in Citrus. This array was created in collaboration with leading Citrus researchers through the Affymetrix GeneChip® Consortia Program. The array contains 30,171 probe sets representing up to 33,879 Citrus transcripts based on EST sequences obtained from several Citrus species and Citrus hybrids. Because Citrus has relatively long generations and times-to-production, it will be especially useful for researchers to identify the genetic mechanisms critical to:

  • High crop yield
  • Disease and insect resistance
  • Growth response to environmental factors

The GeneChip® Citrus Genome Array provides a tool that enables researchers to elucidate these complex genetic traits in Citrus to determine how crop production can be improved. The array includes 46 probe sets representing several Citrus pathogens, and 60 probe sets representing various reporters, selectable markers, and transgenes. Also included are sequences from Poncirus and Poncirus crosses with Citrus hybrids.

The GeneChip® Citrus Genome Array was designed in close collaboration with the Citrus Research Community as part of the Affymetrix® GeneChip Consortia Program.

For research use only. Not for use in diagnostic procedures.

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Data Sheets

Citrus Genome Array (pdf, 133 KB)

Library Files

Citrus Genome Array (zip, 20 MB)

Manuals

Expression Analysis Technical Manual, with Specific Protocols for Use with the Hybridization, Wash, and Stain Kit (pdf, 1.70 MB)

Probe Set Data in MAGE-ML Format

3' IVT Express Kit User Manual (pdf, 1.6 MB)

HT 3' IVT Express Kit (pdf 5.93 MB)

Package Inserts

Citrus Genome Array (pdf, 494 KB)

Protocol, Long

Gene Expression Arrays

Other

Fluidics Scripts

NetAffx Annotation Files

Citrus BLASTP annotations, CSV Format, Release 32 (1 KB 06/09/11)

Citrus Annotations, CSV format, Release 31 (2 MB 08/11/10)

Citrus Annotations, CSV format, Release 32 (2 MB 06/09/11)

Citrus Annotations, MAGE-ML XML Format, Release 31 (20 MB 08/11/10)

Citrus Annotations, CSV format, Release 30 (2 MB 11/15/09)

Citrus Annotations, MAGE-ML XML Format, Release 30 (20 MB 11/15/09)

Citrus BLASTP annotations, CSV Format, Release 30 (1 KB 11/16/09)

Citrus BLASTP annotations, CSV Format, Release 31 (1 KB 08/11/10)

Citrus Annotations, MAGE-ML XML Format, Release 32 (20 MB 06/09/11)

Sequence Files

Citrus Consensus Sequences, FASTA (8 MB 08/20/08)

Citrus Control Sequences, FASTA (52 KB 12/20/05)

Citrus Probe Sequences, FASTA (6 MB 08/20/08)

Citrus Probe Sequences, Tabular (6 MB 08/20/08)

Citrus Target Sequences, FASTA (4 MB 08/20/08)

Archived NetAffx Annotation Files

Citrus Annotations, MAGE-ML XML, Release 20 (20 MB 06/15/07)

Citrus Annotations, CSV, Release 20 (2 MB 05/31/07)

Citrus Annotations, BLASTP, Release 20 (16 KB 07/14/06)

Citrus Annotations, CSV format, Release 25 (2 MB 03/18/08)

Citrus Annotations, MAGE-ML XML Format, Release 25 (20 MB 03/18/08)

Citrus Annotations, CSV format, Release 21 (2 MB 05/31/07)

Citrus Annotations, MAGE-ML XML format, Release 21 (20 MB 06/15/07)

Citrus BLASTP annotations, CSV format, Release 21 (14 KB 11/15/06)

Citrus Annotations, CSV format, Release 22 (2 MB 05/31/07)

Citrus Annotations, MAGE-ML XML Format, Release 22 (20 MB 06/15/07)

Citrus BLASTP annotations, CSV Format, Release 22 (14 KB 03/09/07)

Citrus Annotations, CSV format, Release 23 (2 MB 07/12/07)

Citrus Annotations, MAGE-ML XML Format, Release 23 (20 MB 07/12/07)

Citrus BLASTP annotations, CSV Format, Release 23 (14 KB 07/12/07)

Citrus Annotations, CSV format, Release 24 (2 MB 11/06/07)

Citrus Annotations, MAGE-ML XML Format, Release 24 (20 MB 11/06/07)

Citrus BLASTP annotations, CSV Format, Release 24 (1 KB 11/06/07)

Citrus Annotations, CSV format, Release 26 (2 MB 07/08/08)

Citrus Annotations, MAGE-ML XML Format, Release 26 (20 MB 07/08/08)

Citrus Annotations, CSV format, Release 27 (2 MB 11/30/08)

Citrus Annotations, MAGE-ML XML Format, Release 27 (20 MB 11/24/08)

Citrus Annotations, CSV format, Release 28 (2 MB 03/12/09)

Citrus Annotations, MAGE-ML XML Format, Release 28 (20 MB 03/12/09)

Citrus Annotations, CSV format, Release 29 (2 MB 07/01/09)

Citrus Annotations, MAGE-ML XML Format, Release 29 (20 MB 07/01/09)

Citrus BLASTP annotations, CSV Format, Release 29 (0 KB 07/01/09)

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