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GeneChip C. elegans Tiling 1.0R Array

The GeneChip C. elegans Tiling 1.0R Array is a versatile whole-genome research tool.

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GeneChip C. elegans Tiling 1.0R Array
contains 6 arrays    Please Inquire
     

The GeneChip® C. elegans Tiling 1.0R Array is a versatile whole-genome research tool

  • Most comprehensive C. elegans microarray offering nearly end-to-end probe coverage of genomic sequence.
  • Versatile high-density array design is compatible with many research applications.
  • 25-mer probes yield the most specific hybridization results available.

Array Profile

The GeneChip C. elegans Tiling 1.0R Array is designed for identifying novel transcripts or mapping sites of protein/DNA interaction in chromatin immunoprecipitation (ChIP) experiments, or other Caenorhabditis elegans whole-genome experiments. The C. elegans 1.0R Array is a single array comprised of over 3.2 million perfect match/mismatch probe pairs tiled through the complete non-repetitive Caenorhabditis elegans genome. Sequences used in the design of the C. elegans Tiling 1.0R Array were selected from the WormBase web site, www.wormbase.org, release WS140, March 26, 2005.

Probes are tiled at an avg. resolution of 25 base pair, as measured from the central position of adjacent 25-mer oligos.

Instrument and Software Requirements

  • GeneChip® Scanner 3000 7G
  • GeneChip® Operating Software (GCOS) version 1.3 or higher

Visit the Affymetrix ChIP-on-Chip Web Forum and share protocols, experiences, hints and tips on best practices for ChIP-on-chip and MeDIP-on-chip applications. Free registration is required to view or create posts.

For research use only. Not for use in diagnostic procedures.

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Application Notes

ChIP-on-chip (pdf, 487 KB)

Library Files

C. elegans Tiling 1.0R Array (zip, 122 MB)

GeneChip Tiling Arrays - Data Analysis Library File Updates

Ce25b_v02 C elegans Genome Tiling Array ce4 BPMAP files (62 MB 12/14/07)

Manuals

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for human and mouse tiling arrays (pdf, 160 KB)

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for Arabidopsis, C. elegans, Drosophila, and yeast tiling arrays (pdf, 174 KB)

Affymetrix® Chromatin Immunoprecipitation Assay Protocol (pdf, 424 KB)

Package Inserts

C. elegans Tiling Array 1.0R Array (pdf, 202 KB)

Protocol, Long

Gene Expression Assay and Data Analysis

Gene Expression Arrays

Tutorials

Tiling Analysis Software Tutorial

Archived Presentations

Webinar, Six-part ChIP-on-chip Symposia Series

Scientific Forum, 1st European ChIP-on-chip

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