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GeneChip Arabidopsis Tiling 1.0R Array

GeneChip Arabidopsis Tiling 1.0R Array is a versatile whole-genome research tool.

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900594
GeneChip Arabidopsis Tiling 1.0R Array
contains 6 arrays    Please Inquire
     

GeneChip® Arabidopsis Tiling 1.0R Array is a versatile whole-genome research tool:

  • Most comprehensive Arabidopsis microarray offering high-density 35 base pair probe resolution
  • High-density array design is compatible with many research applications
  • 25-mer probes yield the most specific hybridization results available

Array Profile

The GeneChip® Arabidopsis Tiling 1.0R Array is designed for identifying novel transcripts, mapping sites of protein/DNA interaction in chromatin immunoprecipitation (ChIP) experiments, and other whole-genome experiments. The Arabidopsis 1.0R Array is a single array comprised of over 3.2 million probe pairs tiled through the complete non-repetitive Arabidopsis thaliana genome. Sequences used in the design of the Arabidopsis Tiling 1.0R Array were selected from NCBI Arabidopsis genome assembly (Version 5). Mitochondrial and chloroplast sequences were selected from NCBI (Accession numbers NC_001284 and NC_000932). Probes are tiled at an average of 35 base pair resolution, as measured from the central position of adjacent 25-mer oligos, leaving a gap of approximately 10 base pairs between probes.

Instrument and Software Requirements


Visit the Affymetrix ChIP-on-Chip Web Forum and share protocols, experiences, hints and tips on best practices for ChIP-on-chip and MeDIP-on-chip applications. Free registration is required to view or create posts.

For research use only. Not for use in diagnostic procedures.

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Application Notes

ChIP-on-chip (pdf, 487 KB)

Library Files

Arabidopsis Tiling 1.0R Array (zip, 120 MB)

GeneChip Tiling Arrays - Data Analysis Library File Updates

Manuals

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for human and mouse tiling arrays (pdf, 160 KB)

GeneChip® Eukaryotic Double Strand Whole Transcript Protocol - for Arabidopsis, C. elegans, Drosophila, and yeast tiling arrays (pdf, 174 KB)

Affymetrix® Chromatin Immunoprecipitation Assay Protocol (pdf, 424 KB)

Package Inserts

Arabidopsis Tiling 1.0R Array (pdf, 249 KB)

Tutorials

Tiling Analysis Software Tutorial

Archived Additional Support

Whole Transcript (WT) Double-Stranded Target Assay (pdf, 751 KB)

Archived Presentations

Webinar, Six-part ChIP-on-chip Symposia Series

Scientific Forum, 1st European ChIP-on-chip

Other

Sample transcript mapping data with the Arabidopsis Tiling 1.0R Array (zip, 21 MB)

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