# Test data in notation3 http://www.w3.org/DesignIssues/Notation3.html # @prefix affx: . @prefix rdfs: . @prefix owl: . @prefix : <#> . affx:Gene a owl:Class ; owl:hasProperty affx:onStrand ; owl:hasProperty affx:onChr ; owl:hasProperty affx:hasVariant . affx:onStrand a owl:ObjectProperty ; owl:domain affx:Gene ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "The strand on which the gene exists" . affx:onChr a owl:ObjectProperty ; owl:domain affx:Gene ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "The chromosome on which the gene exists" . affx:hasVariant a owl:ObjectProperty ; owl:domain affx:Gene ; owl:range affx:SpliceVariant ; owl:minCardinality "1" ; rdfs:comment "For associating variants to genes" . affx:SpliceVariant a owl:Class ; owl:hasProperty affx:representedBy . affx:representedBy a owl:ObjectProperty ; owl:domain affx:SpliceVariant ; owl:range affx:Transcript ; owl:minCardinality "1" ; rdfs:comment "In this data, each splice variant is represented by one transcript" . affx:Transcript a owl:Class ; owl:hasProperty affx:unigene ; owl:hasProperty affx:translatesTo ; owl:hasProperty affx:fullCds ; owl:hasProperty affx:hasExon ; owl:hasProperty affx:signalPHit ; owl:hasProperty affx:tmHMMHit ; rdfs:comment "A transcript has a CDS region, a protein translation, and exons" ; rdfs:comment "Additionally the transcript might have one or more annotations" . affx:unigene a owl:ObjectProperty ; owl:domain affx:Transcript ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "The Unigene ID of the transcript - and splice variant" . affx:translatesTo a owl:ObjectProperty ; owl:domain affx:Transcript ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "The amino acid sequence derived from the transcript" . affx:fullCds a owl:ObjectProperty ; owl:domain affx:Transcript ; owl:range affx:GenomicCoordinates ; owl:cardinality "1" ; rdfs:comment "Start and stop coordinates of the full CDS region" . affx:hasExon a owl:ObjectProperty ; owl:domain affx:Transcript ; owl:range affx:ExonPlusCds ; owl:minCardinality "1" ; rdfs:comment "Here, exons are defined only by their coordinates " . affx:ExonPlusCds a owl:Class ; owl:hasProperty affx:relatesToExon ; owl:hasProperty affx:cdsType ; owl:hasProperty affx:cdsStart ; owl:hasProperty affx:cdsStop ; owl:hasProperty affx:frame . affx:relatesToExon a owl:ObjectProperty ; owl:domain affx:ExonWithCds ; owl:range affx:Exon ; owl:cardinality "1" ; rdfs:comment "For associating exons with properties such as frame" . affx:Exon a owl:Class ; rdfs:subClassOf affx:GenomicSpan ; owl:hasProperty affx:commonToAll ; rdfs:comment "Defines the coordinates of an exon on the genome" . affx:GenomicSpan a owl:Class ; rdfs:subClassOf affx:GenomicCoordinates ; rdfs:comment "This defines a region of _ungapped_ genomic alignment" . affx:GenomicCoordinates a owl:Class ; rdfs:subClassOf affx:Coordinates ; rdfs:comment "Start and stop, possibly with intervening gaps " ; rdfs:comment "Strand and chr will be specified at the gene level " . affx:Coordinates a owl:Class ; owl:hasProperty affx:startsAt ; owl:hasProperty affx:stopsAt . affx:startsAt a owl:ObjectProperty ; owl:cardinality "1" ; owl:range rdfs:Literal . affx:stopsAt a owl:ObjectProperty ; owl:cardinality "1" ; owl:range rdfs:Literal . affx:cdsType a owl:ObjectProperty ; owl:domain affx:ExonPlusCds ; owl:range rdfs:Literal ; rdfs:comment "Expected CDS types are Full, Partial, and None" . affx:commonToAll a owl:ObjectProperty ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "Shows if all the gene's variants share this object" . affx:CdsOccupancy a owl:Class ; rdfs:subClassOf rdfs:Literal . affx:cdsStart a owl:ObjectProperty ; rdfs:subClassOf affx:startsAt ; rdfs:comment "For indicating where a specific CDS region starts" . affx:cdsStop a owl:ObjectProperty ; rdfs:subClassOf affx:stopsAt ; rdfs:comment "For indicating where a specific CDS region stops" . affx:frame a owl:ObjectProperty ; owl:range rdfs:Literal ; owl:cardinality "1" . affx:signalPHit a owl:ObjectProperty ; rdfs:domain affx:Transcript ; rdfs:range affx:SignalPeptide ; owl:cardinality "1" . affx:SignalPeptide a owl:Class ; rdfs:subClassOf affx:Annotation ; rdfs:comment "Represents a SIGNALP hit" . affx:tmHMMHit a owl:ObjectProperty ; rdfs:domain affx:Transcript ; rdfs:range affx:Transmembrane ; owl:cardinality "1" . affx:Transmembrane a owl:Class ; rdfs:subClassOf affx:Annotation ; owl:hasProperty affx:helixCount ; rdfs:comment "Represents a TMHMM hit" . affx:Annotation a owl:Class ; owl:hasProperty affx:containsMotif; owl:hasProperty affx:commonToAll ; owl:hasProperty affx:motifCount . affx:containsMotif a owl:ObjectProperty ; owl:domain affx:Annotation ; owl:range affx:Motif ; owl:minCardinality "1" . affx:motifCount a owl:ObjectProperty ; owl:domain affx:Annotation ; owl:range rdfs:Literal ; owl:cardinality "1" ; rdfs:comment "Number of motifs (eg. TM passes) in this annotation" . affx:Motif a owl:Class ; owl:hasProperty affx:hasProteinSpan . affx:hasProteinSpan a owl:ObjectProperty ; owl:domain affx:Motif ; owl:range affx:ProteinSpan . affx:ProteinCoordinates a owl:Class ; rdfs:subClassOf affx:Coordinates ; rdfs:comment "Coordinates onto the protein sequence, possibly gapped ". affx:spannedBy a owl:ObjectProperty ; owl:domain affx:ProteinSpan ; owl:range affx:CdsSpan ; owl:minCardinality "1" . affx:ProteinSpan a owl:Class ; rdfs:subClassOf affx:ProteinCoordinates ; owl:hasProperty affx:spannedBy ; rdfs:comment "An ungapped region of the protein sequence " ; rdfs:comment "Each ProteinSpan as one or more corresponding CDS span" . affx:CdsSpan a owl:Class ; rdfs:subClassOf affx:GenomicSpan ; owl:hasProperty affx:inFrame ; rdfs:comment "A CDS span is a genomic span with a translation frame" ; rdfs:comment "Each CDS span describes a part of the full CDS region" . :Reck a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi7710063] . :gi7710063 a affx:Transcript ; affx:unigene "iMm.20862" ; affx:translatesTo "MASVRASPRSALLLLLAAAGVAEVTGGLAPGSAGAVCCNHSKDNQMCRDVCEQIFSSKSESRLKHLLQRAPDYCPETMVEIWSCMNSSLPGVFKKSDGWVGLGCCELAIGLECRQACKQASSKNDISKVCRKEYENALFSCISRNEMGSVCCSYAGHHTNCREFCQAIFRTDSSPGPSQIKAVENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNACKRILMSKKTEMEIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPPPSTGLDGAKLHCCSKANTSTCRELCTKLYSMSWGNTQSWQEFDRICEYNPVEVSMLTCLADVREPCQLGCTNLTYCTNFNNRPTELFRSCTAQSDQGAMSDMKLWEKGSIKMPFISIPVLDIKTCQPEMWKAVACSLQIKPCHSKSRGSIICKSDCVEILKKCGDQNKFPEEHTAESICEFLSPADDLESCIPLDTYLRPSALGNIIEEVTHPCNPNPCPANELCEVNRKGCPSADPCLPYSCVQGCKLGEASDFIVRQGTLIQVPSSAGEVGCYKICSCGQSGLLENCMEMHCIDLQKSCIVGGKRKSHGTSFTIDCNVCSCFAGNLVCSTRLCLSEHSSDDDRRTFTGLPCNCADQFVPVCAQNGRTYPSACIARCVGLQDHQFEFGPCISKNPCNPNLCPKSQRCVPKPQVCLTTFDKFGCSQYECVPRQLTCDQARDPVCDTDHMEHSYFCTLYQRGKSLSYRGPCQPFCRAKEPVCGHNGETYSSVCAAYSDRVAVDYYGPCQAVGVLSEYSAVAECAAVKCPSLSAIGCKPIIPPGACCPLCAGMLRVLFDKEKLDTIAKVTSKKPITVVEILQKVRMHVSVPQCDVFGYLSIESEIVILIIPVDHYPKALQIEACNKEAEKIESLINSDSPTLASHVPLSALIISQVQVSSSLPSSAVVGRPLFHSLLLLLSLGLTVHLLWTRP" ; affx:hasCds [affx:startsAt "42710569" ; affx:stopsAt "42777572" ]; affx:hasExon [ affx:relatesToExon :Reck_e1; affx:cdsType "Partial" ; affx:cdsStart "42710569" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Reck_e10; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Reck_e11; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e12; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e13; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e14; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e15; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Reck_e16; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e17; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Reck_e18; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e19; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Reck_e20; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Reck_e21; affx:cdsType "Partial" ; affx:cdsStop "42777572" ; affx:frame "2"] ; . :Reck_e1 a affx:Exon ; affx:startsAt "42710563" ; affx:stopsAt "42710669" ; affx:commonToAll "1" . :Reck_e2 a affx:Exon ; affx:startsAt "42725927" ; affx:stopsAt "42725986" ; affx:commonToAll "1" . :Reck_e3 a affx:Exon ; affx:startsAt "42729777" ; affx:stopsAt "42729852" ; affx:commonToAll "1" . :Reck_e4 a affx:Exon ; affx:startsAt "42730808" ; affx:stopsAt "42730845" ; affx:commonToAll "1" . :Reck_e5 a affx:Exon ; affx:startsAt "42732953" ; affx:stopsAt "42733039" ; affx:commonToAll "1" . :Reck_e6 a affx:Exon ; affx:startsAt "42735028" ; affx:stopsAt "42735076" ; affx:commonToAll "1" . :Reck_e7 a affx:Exon ; affx:startsAt "42744017" ; affx:stopsAt "42744051" ; affx:commonToAll "1" . :Reck_e8 a affx:Exon ; affx:startsAt "42746369" ; affx:stopsAt "42746567" ; affx:commonToAll "1" . :Reck_e9 a affx:Exon ; affx:startsAt "42748222" ; affx:stopsAt "42748490" ; affx:commonToAll "1" . :Reck_e10 a affx:Exon ; affx:startsAt "42752751" ; affx:stopsAt "42752931" ; affx:commonToAll "1" . :Reck_e11 a affx:Exon ; affx:startsAt "42757249" ; affx:stopsAt "42757462" ; affx:commonToAll "1" . :Reck_e12 a affx:Exon ; affx:startsAt "42759498" ; affx:stopsAt "42759635" ; affx:commonToAll "1" . :Reck_e13 a affx:Exon ; affx:startsAt "42761583" ; affx:stopsAt "42761724" ; affx:commonToAll "1" . :Reck_e14 a affx:Exon ; affx:startsAt "42762714" ; affx:stopsAt "42762903" ; affx:commonToAll "1" . :Reck_e15 a affx:Exon ; affx:startsAt "42764630" ; affx:stopsAt "42764753" ; affx:commonToAll "1" . :Reck_e16 a affx:Exon ; affx:startsAt "42765326" ; affx:stopsAt "42765500" ; affx:commonToAll "1" . :Reck_e17 a affx:Exon ; affx:startsAt "42771700" ; affx:stopsAt "42771891" ; affx:commonToAll "1" . :Reck_e18 a affx:Exon ; affx:startsAt "42773095" ; affx:stopsAt "42773306" ; affx:commonToAll "1" . :Reck_e19 a affx:Exon ; affx:startsAt "42774863" ; affx:stopsAt "42774937" ; affx:commonToAll "1" . :Reck_e20 a affx:Exon ; affx:startsAt "42776480" ; affx:stopsAt "42776636" ; affx:commonToAll "1" . :Reck_e21 a affx:Exon ; affx:startsAt "42777350" ; affx:stopsAt "42778727" ; affx:commonToAll "1" . :Sid1669 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi5931542] . :gi5931542 a affx:Transcript ; affx:unigene "iMm.25228" ; affx:translatesTo "MGNCLKSPTSDDISLLHESQSDRASFGEGTEPDQEPPPPYQEQVPVPIYHPTPSQTRLATQLTEEEQIRIAQRIGLIQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHLDCIDDWLMRSFTCPSCMEPVDAALLSSYETN" ; affx:hasCds [affx:startsAt "107205673" ; affx:stopsAt "107228155" ]; affx:hasExon [ affx:relatesToExon :Sid1669_e1; affx:cdsType "Partial" ; affx:cdsStart "107205673" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sid1669_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sid1669_e3; affx:cdsType "Partial" ; affx:cdsStop "107228155" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sid1669_e4; affx:cdsType "None" ] ; . :Sid1669_e1 a affx:Exon ; affx:startsAt "107204321" ; affx:stopsAt "107205845" ; affx:commonToAll "1" . :Sid1669_e2 a affx:Exon ; affx:startsAt "107208320" ; affx:stopsAt "107208490" ; affx:commonToAll "1" . :Sid1669_e3 a affx:Exon ; affx:startsAt "107228032" ; affx:stopsAt "107228184" ; affx:commonToAll "1" . :Sid1669_e4 a affx:Exon ; affx:startsAt "107228877" ; affx:stopsAt "107228986" ; affx:commonToAll "1" . :Sfrs4 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi10181125] . :gi10181125 a affx:Transcript ; affx:unigene "iMm.2478" ; affx:translatesTo "MKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSHSRSKSRSRSQSRSRSKKEKSRSPSKDNKSRSRSRSPDKSRSKSKDHAEDKLQNNDSAGKAKSHSPSRHDSKSRSRSQERRAEEERRRSVSRARSQEKSRSQEKSLLKSRSRSRSKVGSRSRSRSKDKRKGRKRSRDESRSRSRSKSERSRKHSSKRDSKVSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRESRAEGESEAPNPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRSRSHSRS" ; affx:hasCds [affx:startsAt "129443717" ; affx:stopsAt "129447040" ]; affx:hasExon [ affx:relatesToExon :Sfrs4_e1; affx:cdsType "Partial" ; affx:cdsStart "129443717" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sfrs4_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sfrs4_e3; affx:cdsType "Partial" ; affx:cdsStop "129447040" ; affx:frame "0"] ; . :Sfrs4_e1 a affx:Exon ; affx:startsAt "129443698" ; affx:stopsAt "129443839" ; affx:commonToAll "1" . :Sfrs4_e2 a affx:Exon ; affx:startsAt "129446029" ; affx:stopsAt "129446119" ; affx:commonToAll "1" . :Sfrs4_e3 a affx:Exon ; affx:startsAt "129446232" ; affx:stopsAt "129447674" ; affx:commonToAll "1" . :Srm a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6678130] . :gi6678130 a affx:Transcript ; affx:unigene "iMm.10" ; affx:translatesTo "MEPGPDGPAAPGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIEVSKKFLPGMAVGFSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCKSLFPVVDYAYCSIPTYPSGQIGFMLCSKNPSTNFREPVQQLTQAQVEQMQLKYYNSDMHRAAFVLPEFTRKALNDIS" ; affx:hasCds [affx:startsAt "143962267" ; affx:stopsAt "143964955" ]; affx:hasExon [ affx:relatesToExon :Srm_e1; affx:cdsType "Partial" ; affx:cdsStart "143962267" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Srm_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Srm_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Srm_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Srm_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Srm_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Srm_e7; affx:cdsType "Partial" ; affx:cdsStop "143964955" ; affx:frame "0"] ; . :Srm_e1 a affx:Exon ; affx:startsAt "143962194" ; affx:stopsAt "143962434" ; affx:commonToAll "1" . :Srm_e2 a affx:Exon ; affx:startsAt "143962691" ; affx:stopsAt "143962812" ; affx:commonToAll "1" . :Srm_e3 a affx:Exon ; affx:startsAt "143963129" ; affx:stopsAt "143963222" ; affx:commonToAll "1" . :Srm_e4 a affx:Exon ; affx:startsAt "143963935" ; affx:stopsAt "143964089" ; affx:commonToAll "1" . :Srm_e5 a affx:Exon ; affx:startsAt "143964415" ; affx:stopsAt "143964645" ; affx:commonToAll "1" . :Srm_e6 a affx:Exon ; affx:startsAt "143964730" ; affx:stopsAt "143964853" ; affx:commonToAll "1" . :Srm_e7 a affx:Exon ; affx:startsAt "143964934" ; affx:stopsAt "143965240" ; affx:commonToAll "1" . :Slc9a1 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi8567403] . :gi8567403 a affx:Transcript ; affx:unigene "iMm.4312" ; affx:translatesTo "MMLRWSGVWGFHPPRIFPSLLVVVALVGLLPVLRSHGLQHSPTASTIRGSEPPRERSIGDVTTAPSEPLHRPDDHNLTNLIIEHGGKPSRKAFPVLDIDYPHVRTPFEISLWILLACLMKIGFHVIPTISSIVPESCLLIVVGLLVGGLIKGVGETPPFLQSDVFFLFLLPPIILDAGYFLPLRQFTENLGTILIFAVVGTLWNAFFLGGLLYAVCLVGGEQINNIGLLDTLLFGSIISAVDPVAVLAVFEEIHINELLHILVFGESLLNDAVTVVLYHLFEEFASYDSVGISDIFLGFLSFFVVALGGVFVGVVYGVIAAFTSRFTSHIRVIEPLFVFLYSYMAYLSAELFHLSGIMALIASGVVMRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGSHQWNWTFVISTLLFCLIARVLGVLVLTWFINKFRIVKLTPKDQFIIAYGGLRGAIAFSLGYLLDKKHFPMCDLFLTAIITVIFFTVFVQGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGMGKIPSAVSTVSMQNIHPKAVTSDRILPALSKDKEEEIRKILRSNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKARQLEQKITNYLTVPAHKLDSPTLSRARIGSDPLAYEPKADLPVITIDPASPQSPESVDLVNEELKGKVLGLNRGPRVTPEEEEEDEDGIIMIRSKEPSSPGTDDVFTPGSSDSPSSQRIQRCLSDPGPHPEPGEGEPFIPKGQ" ; affx:hasCds [affx:startsAt "130940179" ; affx:stopsAt "130991518" ]; affx:hasExon [ affx:relatesToExon :Slc9a1_e1; affx:cdsType "Partial" ; affx:cdsStart "130940179" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e9; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e10; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e12; affx:cdsType "Partial" ; affx:cdsStop "130991518" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Slc9a1_e13; affx:cdsType "None" ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "35" ; affx:spannedBy [ affx:startsAt "130940179" ; affx:stopsAt "130940284" ; affx:inFrame "0" ] ; ] ; ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "11" ; affx:containsMotif [ affx:startsAt "128" ; affx:stopsAt "150" ; affx:spannedBy [ affx:startsAt "130981047" ; affx:stopsAt "130981113" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "165" ; affx:stopsAt "183" ; affx:spannedBy [ affx:startsAt "130981158" ; affx:stopsAt "130981212" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "190" ; affx:stopsAt "212" ; affx:spannedBy [ affx:startsAt "130981233" ; affx:stopsAt "130981299" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "227" ; affx:stopsAt "249" ; affx:spannedBy [ affx:startsAt "130981344" ; affx:stopsAt "130981410" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "258" ; affx:stopsAt "280" ; affx:spannedBy [ affx:startsAt "130981437" ; affx:stopsAt "130981488" ; affx:inFrame "0" ] ; affx:spannedBy [ affx:startsAt "130984491" ; affx:stopsAt "130984506" ; affx:inFrame "2" ] ; ] ; affx:containsMotif [ affx:startsAt "295" ; affx:stopsAt "317" ; affx:spannedBy [ affx:startsAt "130984551" ; affx:stopsAt "130984617" ; affx:inFrame "2" ] ; ] ; affx:containsMotif [ affx:startsAt "338" ; affx:stopsAt "360" ; affx:spannedBy [ affx:startsAt "130984680" ; affx:stopsAt "130984742" ; affx:inFrame "2" ] ; affx:spannedBy [ affx:startsAt "130985471" ; affx:stopsAt "130985475" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "389" ; affx:stopsAt "411" ; affx:spannedBy [ affx:startsAt "130985562" ; affx:stopsAt "130985628" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "418" ; affx:stopsAt "440" ; affx:spannedBy [ affx:startsAt "130985649" ; affx:stopsAt "130985689" ; affx:inFrame "1" ] ; affx:spannedBy [ affx:startsAt "130987090" ; affx:stopsAt "130987116" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "455" ; affx:stopsAt "472" ; affx:spannedBy [ affx:startsAt "130987161" ; affx:stopsAt "130987212" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "484" ; affx:stopsAt "503" ; affx:spannedBy [ affx:startsAt "130987248" ; affx:stopsAt "130987293" ; affx:inFrame "0" ] ; affx:spannedBy [ affx:startsAt "130988644" ; affx:stopsAt "130988656" ; affx:inFrame "2" ] ; ] ; ] ; . :Slc9a1_e1 a affx:Exon ; affx:startsAt "130939864" ; affx:stopsAt "130940543" ; affx:commonToAll "1" . :Slc9a1_e2 a affx:Exon ; affx:startsAt "130981027" ; affx:stopsAt "130981488" ; affx:commonToAll "1" . :Slc9a1_e3 a affx:Exon ; affx:startsAt "130984491" ; affx:stopsAt "130984742" ; affx:commonToAll "1" . :Slc9a1_e4 a affx:Exon ; affx:startsAt "130985471" ; affx:stopsAt "130985689" ; affx:commonToAll "1" . :Slc9a1_e5 a affx:Exon ; affx:startsAt "130987090" ; affx:stopsAt "130987293" ; affx:commonToAll "1" . :Slc9a1_e6 a affx:Exon ; affx:startsAt "130988644" ; affx:stopsAt "130988734" ; affx:commonToAll "1" . :Slc9a1_e7 a affx:Exon ; affx:startsAt "130989115" ; affx:stopsAt "130989186" ; affx:commonToAll "1" . :Slc9a1_e8 a affx:Exon ; affx:startsAt "130989292" ; affx:stopsAt "130989466" ; affx:commonToAll "1" . :Slc9a1_e9 a affx:Exon ; affx:startsAt "130989695" ; affx:stopsAt "130989810" ; affx:commonToAll "1" . :Slc9a1_e10 a affx:Exon ; affx:startsAt "130989976" ; affx:stopsAt "130990078" ; affx:commonToAll "1" . :Slc9a1_e11 a affx:Exon ; affx:startsAt "130990692" ; affx:stopsAt "130990765" ; affx:commonToAll "1" . :Slc9a1_e12 a affx:Exon ; affx:startsAt "130991177" ; affx:stopsAt "130992327" ; affx:commonToAll "1" . :Slc9a1_e13 a affx:Exon ; affx:startsAt "130992349" ; affx:stopsAt "130992888" ; affx:commonToAll "1" . :Tssk3b a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi15419921] . :gi15419921 a affx:Transcript ; affx:unigene "iMm.143802" ; affx:translatesTo "MEDFLLSNGYQLGKTIGEGTYSKVKEAFSKKHQRKVAIKIIDKMGGPEEFIQRFLPRELQIVRTLDHKNIIQVYEMLESADGKIYLVMELAEGGDVFDCVLNGGPLPESRAKALFRQMVEAIRYCHGCGVAHRDLKCENALLQGFNLKLTDFGFAKVLPKSRRELSQTFCGSTAYAAPEVLQGIPHDSKKGDVWSMGVVLYVMLCASLPFDDTDIPKMLWQQQKGVSFPTHLGISTECQDLLKRLLEPDMILRPSIEEVSWHPWLAST" ; affx:hasCds [affx:startsAt "126991938" ; affx:stopsAt "126993474" ]; affx:hasExon [ affx:relatesToExon :Tssk3b_e1; affx:cdsType "Partial" ; affx:cdsStart "126991938" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Tssk3b_e2; affx:cdsType "Partial" ; affx:cdsStop "126993474" ; affx:frame "0"] ; . :Tssk3b_e1 a affx:Exon ; affx:startsAt "126991881" ; affx:stopsAt "126992600" ; affx:commonToAll "1" . :Tssk3b_e2 a affx:Exon ; affx:startsAt "126993329" ; affx:stopsAt "126993610" ; affx:commonToAll "1" . :Gene4419 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi17390905] . :gi17390905 a affx:Transcript ; affx:unigene "iMm.143603" ; affx:translatesTo "MSVAGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQASSQPRREYQPKPRMSLEFATGDSTQPNGGLSHTGTPKPPGVQMDQPCCRALYDFEPENEGELGFKEGDIITLTNQIDENWYEGMLHGQSGFFPINYVEILVALPH" ; affx:hasCds [affx:startsAt "82511652" ; affx:stopsAt "82694806" ]; affx:hasExon [ affx:relatesToExon :Gene4419_e1; affx:cdsType "Partial" ; affx:cdsStart "82511652" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4419_e9; affx:cdsType "Partial" ; affx:cdsStop "82694806" ; affx:frame "1"] ; . :Gene4419_e1 a affx:Exon ; affx:startsAt "82511531" ; affx:stopsAt "82511697" ; affx:commonToAll "1" . :Gene4419_e2 a affx:Exon ; affx:startsAt "82654416" ; affx:stopsAt "82654485" ; affx:commonToAll "1" . :Gene4419_e3 a affx:Exon ; affx:startsAt "82662619" ; affx:stopsAt "82662692" ; affx:commonToAll "1" . :Gene4419_e4 a affx:Exon ; affx:startsAt "82683393" ; affx:stopsAt "82683537" ; affx:commonToAll "1" . :Gene4419_e5 a affx:Exon ; affx:startsAt "82684446" ; affx:stopsAt "82684580" ; affx:commonToAll "1" . :Gene4419_e6 a affx:Exon ; affx:startsAt "82686304" ; affx:stopsAt "82686463" ; affx:commonToAll "1" . :Gene4419_e7 a affx:Exon ; affx:startsAt "82688457" ; affx:stopsAt "82688561" ; affx:commonToAll "1" . :Gene4419_e8 a affx:Exon ; affx:startsAt "82692842" ; affx:stopsAt "82692973" ; affx:commonToAll "1" . :Gene4419_e9 a affx:Exon ; affx:startsAt "82694606" ; affx:stopsAt "82696433" ; affx:commonToAll "1" . :Sil a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6677972] . :gi6677972 a affx:Transcript ; affx:unigene "iMm.3988" ; affx:translatesTo "MNTRFPSSKMVPFHFPPSKLALWNPMPIGECIYLHLSYYRKPKLMVTEKAIRLAYRHAKQNKKNVPCFLLGSLTVDEDEEGVTLTIDRFDPGREIPECLERTPTASLPGDFLIPCRVHIQGLGSRDVIVHNADDFSSALKALQYHVCSKDFLDCGKLLCLRAQITPRESLDGVDFNLQWTAVTLANSFKCVPVKPIPIIPTALARNLSSNLNISQVQGTYKHGYITMDETRKLLLLLQSDPKVSSLPLVGIWLAGIIHVYSPQVWACCLRYMFSSSIQERVFSESGNFIIVLYSLTHKEPEFYECLPCESRTPDLQFQLLTNKETLHLFNNVEPSGKNPIHFELSAESQDAEAEAEVLSKISKTLPVKRSSQKLSPGKIPINKHDTDLEDEDFSPRPIPSPHPVSQKISKVQPSVPELSLVLDNNFTESSNQSNPLEMMTVENPLLIKPSQPELCDAKHSSEATTGEPFRRGPTNQLSQDTALRQSRGKQSSTCKKESLQFRNTNAKPSLSVPSPDVAEKLQAVSAGSMQKEDYPVRPSTLDSRQPSLAPQAQPHNLVFSTHNSTRPMELQVPTPSLPSYYPTNVCSCCQHHGHIQYSTINSWQGNTVGSIQDLRSESLPKHAFFHSSGCPSLCPNAIYSSSSPVSMKQGGMGAYSPHSNGEPSPVAGPSHVDSCVPHPCAMCMHMPNTAPDNGMMGLSPDAYRFVTEQDRQLRLLQAQIQRLLEAQSLDPGSHKTVATVEDTVKAAKQMELVSMEAQSSPGLHMRKSVSIAVSTGASLFWNAAGDDQEPDSQPKQDDTKISSEDMNFSVDINNEATSLPGSASSLKAVDIPSFEESNLAVEEVNQPLPESNSSSEQSKEPGVPVFFPNALLAESVSMCLQTAPTEGASNSTELPQGTKDEPYRPSDNQKIYQDLLGQVNHLLSNASQETEEPPTKAVVTNRECAKTQNTHHARKKRHNSGLVDKDCVLSATIKQLRSLGVKIDSPTKVKKNEQKVDHASVLACISPEAVISGLNYMSFGNVGMSSLSPTGVDLSMEANAIALKYLSENQLSQLSLARSKQNNGDSSVGLLHINSDRSTVGLSLVSPSNMSFATKKYMKRYGLLQSSDNSEDEEEPPSHADSESDHVLNRNPACRPVQCGHEKEPSWNACEIAQCSDCGSADTRTDVPVLRNITNQAVQPRATEHLNEDSAISLRNLKPNPAMNLRTGKAEFTHHPEKENERDIAVFPGTLPSPETLKQMNSMDSVGTFLDVKRLRQLPKLF" ; affx:hasCds [affx:startsAt "112785410" ; affx:stopsAt "112824361" ]; affx:hasExon [ affx:relatesToExon :Sil_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Sil_e2; affx:cdsType "Partial" ; affx:cdsStart "112785410" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sil_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sil_e5; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e6; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Sil_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Sil_e8; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Sil_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Sil_e12; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Sil_e13; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e14; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e15; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e16; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Sil_e17; affx:cdsType "Partial" ; affx:cdsStop "112824361" ; affx:frame "1"] ; . :Sil_e1 a affx:Exon ; affx:startsAt "112782688" ; affx:stopsAt "112782836" ; affx:commonToAll "1" . :Sil_e2 a affx:Exon ; affx:startsAt "112785336" ; affx:stopsAt "112785421" ; affx:commonToAll "1" . :Sil_e3 a affx:Exon ; affx:startsAt "112787361" ; affx:stopsAt "112787469" ; affx:commonToAll "1" . :Sil_e4 a affx:Exon ; affx:startsAt "112789170" ; affx:stopsAt "112789283" ; affx:commonToAll "1" . :Sil_e5 a affx:Exon ; affx:startsAt "112789624" ; affx:stopsAt "112789812" ; affx:commonToAll "1" . :Sil_e6 a affx:Exon ; affx:startsAt "112791759" ; affx:stopsAt "112792007" ; affx:commonToAll "1" . :Sil_e7 a affx:Exon ; affx:startsAt "112792552" ; affx:stopsAt "112792636" ; affx:commonToAll "1" . :Sil_e8 a affx:Exon ; affx:startsAt "112794282" ; affx:stopsAt "112794369" ; affx:commonToAll "1" . :Sil_e9 a affx:Exon ; affx:startsAt "112796562" ; affx:stopsAt "112796713" ; affx:commonToAll "1" . :Sil_e10 a affx:Exon ; affx:startsAt "112798660" ; affx:stopsAt "112798776" ; affx:commonToAll "1" . :Sil_e11 a affx:Exon ; affx:startsAt "112803963" ; affx:stopsAt "112804078" ; affx:commonToAll "1" . :Sil_e12 a affx:Exon ; affx:startsAt "112805970" ; affx:stopsAt "112806906" ; affx:commonToAll "1" . :Sil_e13 a affx:Exon ; affx:startsAt "112812267" ; affx:stopsAt "112812436" ; affx:commonToAll "1" . :Sil_e14 a affx:Exon ; affx:startsAt "112815041" ; affx:stopsAt "112815270" ; affx:commonToAll "1" . :Sil_e15 a affx:Exon ; affx:startsAt "112820736" ; affx:stopsAt "112820929" ; affx:commonToAll "1" . :Sil_e16 a affx:Exon ; affx:startsAt "112821466" ; affx:stopsAt "112821717" ; affx:commonToAll "1" . :Sil_e17 a affx:Exon ; affx:startsAt "112823571" ; affx:stopsAt "112825293" ; affx:commonToAll "1" . :Gene4421 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi15126642] . :gi15126642 a affx:Transcript ; affx:unigene "iMm.22684" ; affx:translatesTo "MAPARENVSLFFKLYCLTVMTLVAAAYTVALRYTRTTAEELYFSTTAVCITEVIKLLISVGLLAKETGSLGRFKASLSENVLGSPKELAKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVFMLCGGVTLVQWKPAQATKVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVLLFGLQITLSFALGALLVCVSIYLYGLPRQDTTSIQQEATSKERIIGV" ; affx:hasCds [affx:startsAt "34319798" ; affx:stopsAt "34342934" ]; affx:hasExon [ affx:relatesToExon :Gene4421_e1; affx:cdsType "Partial" ; affx:cdsStart "34319798" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e5; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4421_e8; affx:cdsType "Partial" ; affx:cdsStop "34342934" ; affx:frame "0"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "25" ; affx:spannedBy [ affx:startsAt "34342918" ; affx:stopsAt "34342934" ; affx:inFrame "0" ] ; affx:spannedBy [ affx:startsAt "34339189" ; affx:stopsAt "34339248" ; affx:inFrame "0" ] ; ] ; ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "6" ; affx:containsMotif [ affx:startsAt "41" ; affx:stopsAt "63" ; affx:spannedBy [ affx:startsAt "34339075" ; affx:stopsAt "34339141" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "143" ; affx:stopsAt "160" ; affx:spannedBy [ affx:startsAt "34330839" ; affx:stopsAt "34330890" ; affx:inFrame "2" ] ; ] ; affx:containsMotif [ affx:startsAt "175" ; affx:stopsAt "194" ; affx:spannedBy [ affx:startsAt "34327472" ; affx:stopsAt "34327521" ; affx:inFrame "2" ] ; affx:spannedBy [ affx:startsAt "34325348" ; affx:stopsAt "34325356" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "206" ; affx:stopsAt "228" ; affx:spannedBy [ affx:startsAt "34325246" ; affx:stopsAt "34325312" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "238" ; affx:stopsAt "260" ; affx:spannedBy [ affx:startsAt "34325179" ; affx:stopsAt "34325216" ; affx:inFrame "1" ] ; affx:spannedBy [ affx:startsAt "34324724" ; affx:stopsAt "34324753" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "273" ; affx:stopsAt "295" ; affx:spannedBy [ affx:startsAt "34324619" ; affx:stopsAt "34324685" ; affx:inFrame "0" ] ; ] ; ] ; . :Gene4421_e1 a affx:Exon ; affx:startsAt "34318949" ; affx:stopsAt "34319923" ; affx:commonToAll "1" . :Gene4421_e2 a affx:Exon ; affx:startsAt "34324618" ; affx:stopsAt "34324753" ; affx:commonToAll "1" . :Gene4421_e3 a affx:Exon ; affx:startsAt "34325179" ; affx:stopsAt "34325356" ; affx:commonToAll "1" . :Gene4421_e4 a affx:Exon ; affx:startsAt "34327472" ; affx:stopsAt "34327539" ; affx:commonToAll "1" . :Gene4421_e5 a affx:Exon ; affx:startsAt "34330812" ; affx:stopsAt "34330965" ; affx:commonToAll "1" . :Gene4421_e6 a affx:Exon ; affx:startsAt "34331254" ; affx:stopsAt "34331414" ; affx:commonToAll "1" . :Gene4421_e7 a affx:Exon ; affx:startsAt "34339070" ; affx:stopsAt "34339248" ; affx:commonToAll "1" . :Gene4421_e8 a affx:Exon ; affx:startsAt "34342918" ; affx:stopsAt "34343028" ; affx:commonToAll "1" . :Ubap a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi15011881] . :gi15011881 a affx:Transcript ; affx:unigene "iMm.29877" ; affx:translatesTo "MASKKLGTDVHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREMQYDFSLEKKTIEWAEDIKLIQEAQREAERKAEEAEAKVNSKSGPEGDSKVSFPKTHNTATMPPPINPILASLQHNNILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNTARGSSGAVLQDEEVLASLEQATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPTVSNIKSLSFPKLDSDDSNQKTVKLASTFHSTSCLRSGASRSLLKPSTQSSASELNGDHTLGLSALNLNSGTEVPTLTSSQMPSLSSVSVCTEESSPPDPCPTVTPLNFSVSQVPNMPSCPQAYLELQALSPSERQCVETVVNMGYSYDCVLRAMRKKGENIEQILDYLFAHGQLCEKGFDLF" ; affx:hasCds [affx:startsAt "41132852" ; affx:stopsAt "41154321" ]; affx:hasExon [ affx:relatesToExon :Ubap_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Ubap_e2; affx:cdsType "Partial" ; affx:cdsStart "41132852" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ubap_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ubap_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ubap_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ubap_e6; affx:cdsType "Partial" ; affx:cdsStop "41154312" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ubap_e7; affx:cdsType "None" ] ; . :Ubap_e1 a affx:Exon ; affx:startsAt "41115006" ; affx:stopsAt "41115185" ; affx:commonToAll "1" . :Ubap_e2 a affx:Exon ; affx:startsAt "41132845" ; affx:stopsAt "41132886" ; affx:commonToAll "1" . :Ubap_e3 a affx:Exon ; affx:startsAt "41137681" ; affx:stopsAt "41137806" ; affx:commonToAll "1" . :Ubap_e4 a affx:Exon ; affx:startsAt "41145111" ; affx:stopsAt "41146035" ; affx:commonToAll "1" . :Ubap_e5 a affx:Exon ; affx:startsAt "41153339" ; affx:stopsAt "41153522" ; affx:commonToAll "1" . :Ubap_e6 a affx:Exon ; affx:startsAt "41154260" ; affx:stopsAt "41154362" ; affx:commonToAll "1" . :Ubap_e7 a affx:Exon ; affx:startsAt "41154845" ; affx:stopsAt "41155931" ; affx:commonToAll "1" . :Dscr1l2 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi12667789] . :gi12667789 a affx:Transcript ; affx:unigene "iMm.200355" ; affx:translatesTo "MLRDSLKSWNDSQSDLCSSDQEEEEEMVFGENEDGLEEMMDLSDLPTSLFACSVHEAVFEVQEQKERFEALFTLYDDQVTFQLFKSFRRVRINFSKPEAAARARIELHESEFHGRKLKLYFAQVQVSGEARDKSYLLPPQPTKQFLISPPASPPVGWKQSEDAMPVINYDLLCAVSKLGPGEKYELHAGTESTPSVVVHVCESETEEEEDTKNPKQKITQTRRPEAPTAALSERLDCAL" ; affx:hasCds [affx:startsAt "132999383" ; affx:stopsAt "133008372" ]; affx:hasExon [ affx:relatesToExon :Dscr1l2_e1; affx:cdsType "Partial" ; affx:cdsStart "132999383" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dscr1l2_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dscr1l2_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dscr1l2_e4; affx:cdsType "Partial" ; affx:cdsStop "133008372" ; affx:frame "2"] ; . :Dscr1l2_e1 a affx:Exon ; affx:startsAt "132999353" ; affx:stopsAt "132999562" ; affx:commonToAll "1" . :Dscr1l2_e2 a affx:Exon ; affx:startsAt "133001343" ; affx:stopsAt "133001515" ; affx:commonToAll "1" . :Dscr1l2_e3 a affx:Exon ; affx:startsAt "133003209" ; affx:stopsAt "133003383" ; affx:commonToAll "1" . :Dscr1l2_e4 a affx:Exon ; affx:startsAt "133008177" ; affx:stopsAt "133008398" ; affx:commonToAll "1" . :Gene4424 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi15929705] . :gi15929705 a affx:Transcript ; affx:unigene "iMm.30193" ; affx:translatesTo "MEKNGNNRKLRVCVATCNRADYSKLAPIMFGIKTEPAFFELDVVVLGSHLIDDYGNTYRMIEQDDFDINTRLHTIVRGEDEAAMVESVGLALVKLPDVLNRLKPDIMIVHGDRFDALALATSAALMNIRILHIEGGEVSGTIDDSIRHAITKLAHYHVCCTRSAEQHLISMCEDHDRILLAGCPSYDKLLSAKNKDYMSIIRMWLGDDVKCKDYIVALQHPVTTDIKHSIKMFELTLDALISFNKRTLVLFPNIDAGSKEMVRVMRKKGIEHHPNFRAVKHVPFDQFIQLVAHAGCMIGNSSCGVREVGAFGTPVINLGTRQIGRETGENVLHVRDADTQDKILQALHLQFGKQYPCSKIYGDGNAVPRILKFLKSIDLQEPLQKKFCFPPVKENISQDIDHILETLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERISLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPQEGVVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAAMAERKFGQGKGQENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNVKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYTTRRIH" ; affx:hasCds [affx:startsAt "42872173" ; affx:stopsAt "42901974" ]; affx:hasExon [ affx:relatesToExon :Gene4424_e1; affx:cdsType "Partial" ; affx:cdsStart "42872173" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e11; affx:cdsType "Partial" ; affx:cdsStop "42901974" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4424_e12; affx:cdsType "None" ] ; . :Gene4424_e1 a affx:Exon ; affx:startsAt "42871881" ; affx:stopsAt "42872409" ; affx:commonToAll "1" . :Gene4424_e2 a affx:Exon ; affx:startsAt "42874002" ; affx:stopsAt "42874119" ; affx:commonToAll "1" . :Gene4424_e3 a affx:Exon ; affx:startsAt "42875309" ; affx:stopsAt "42875492" ; affx:commonToAll "1" . :Gene4424_e4 a affx:Exon ; affx:startsAt "42876718" ; affx:stopsAt "42876940" ; affx:commonToAll "1" . :Gene4424_e5 a affx:Exon ; affx:startsAt "42877218" ; affx:stopsAt "42877348" ; affx:commonToAll "1" . :Gene4424_e6 a affx:Exon ; affx:startsAt "42879814" ; affx:stopsAt "42880025" ; affx:commonToAll "1" . :Gene4424_e7 a affx:Exon ; affx:startsAt "42880958" ; affx:stopsAt "42881046" ; affx:commonToAll "1" . :Gene4424_e8 a affx:Exon ; affx:startsAt "42887826" ; affx:stopsAt "42888039" ; affx:commonToAll "1" . :Gene4424_e9 a affx:Exon ; affx:startsAt "42890260" ; affx:stopsAt "42890413" ; affx:commonToAll "1" . :Gene4424_e10 a affx:Exon ; affx:startsAt "42894831" ; affx:stopsAt "42895283" ; affx:commonToAll "1" . :Gene4424_e11 a affx:Exon ; affx:startsAt "42901810" ; affx:stopsAt "42902016" ; affx:commonToAll "1" . :Gene4424_e12 a affx:Exon ; affx:startsAt "42921851" ; affx:stopsAt "42921970" ; affx:commonToAll "1" . :ICAD-L a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi2754585] ; affx:hasVariant [affx:representedBy :gi6753627] . :gi2754585 a affx:Transcript ; affx:unigene "iMm.41433" ; affx:translatesTo "MELSRGASAPDPDDVRPLKPCLLRRNHSRDQHGVAASSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFLCLPSNTKFVALACNEKWIYNDSDGGTAWVSQESFEADEPDSRAGVKWKNVARQLKEDLSSIILLSEEDLQALIDIPCAELAQELCQSCATVQGLQSTLQQVLDQREEARQSKQLLELYLQALEKEGNILSNQKESKAALSEELDAVDTGVGREMASEVLLRSQILTTLKEKPAPELSLSSQDLESVSKEDPKALAVALSWDIRKAETVQQACTTELALRLQQVQSLHSLRNLSARRSPLPGEPQRPKRAKRDSS" ; affx:hasCds [affx:startsAt "144485074" ; affx:stopsAt "144504209" ]; affx:hasExon [ affx:relatesToExon :ICAD-L_e1; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e7; affx:cdsType "Full" ; affx:frame "2"] ; . :gi6753627 a affx:Transcript ; affx:unigene "iMm.41433" ; affx:translatesTo "MELSRGASAPDPDDVRPLKPCLLRRNHSRDQHGVAASSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFLCLPSNTKFVALACNEKWIYNDSDGGTAWVSQESFEADEPDSRAGVKWKNVARQLKEDLSSIILLSEEDLQALIDIPCAELAQELCQSCATVQGLQSTLQQVLDQREEARQSKQLLELYLQALEKEGNILSNQKESKAALSEELDAVDTGVGREMASEVLLRSQILTTLKEKPAPELSLSSQDLEVGKN" ; affx:hasCds [affx:startsAt "144485074" ; affx:stopsAt "144502856" ]; affx:hasExon [ affx:relatesToExon :ICAD-L_e1; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAD-L_e6; affx:cdsType "Full" ; affx:frame "0"] ; . :ICAD-L_e1 a affx:Exon ; affx:startsAt "144485074" ; affx:stopsAt "144485210" ; affx:commonToAll "1" . :ICAD-L_e2 a affx:Exon ; affx:startsAt "144486975" ; affx:stopsAt "144487137" ; affx:commonToAll "1" . :ICAD-L_e3 a affx:Exon ; affx:startsAt "144493853" ; affx:stopsAt "144493996" ; affx:commonToAll "1" . :ICAD-L_e4 a affx:Exon ; affx:startsAt "144502325" ; affx:stopsAt "144502515" ; affx:commonToAll "1" . :ICAD-L_e5 a affx:Exon ; affx:startsAt "144502689" ; affx:stopsAt "144502841" ; affx:commonToAll "0" . :ICAD-L_e6 a affx:Exon ; affx:startsAt "144502689" ; affx:stopsAt "144502856" ; affx:commonToAll "0" . :ICAD-L_e7 a affx:Exon ; affx:startsAt "144503996" ; affx:stopsAt "144504209" ; affx:commonToAll "0" . :Gene4426 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi608136] ; affx:hasVariant [affx:representedBy :gi6678626] . :gi608136 a affx:Transcript ; affx:unigene "iMm.4340" ; affx:translatesTo "MDFPQHSQRVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVASFLQMQDIVTACHTLKSLAEPSSTTGESADASAVEGGDKRAKDEKAAATMLSRLDQARGSSSTGPGRELKEERGGQAESASSGAEQTEKADAPREPPPVELKPDPTSSMAAAEAEALSESSEQEMEVEPASKGEDGQEEEGAGPATVKEEGMHLDNGEPPEENEESAGTDSGQELGMEGQNLRSGTYGDRTESKAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTHCQRQFADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGGEVSVVTVDDMVTLATEALAATAVTQLTVVPVGAAVTADETEVLKAEISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQALVMFQTDADFYQQYGPGSTWPAGQMLQAGELVFRPRDGTEGQPTLAESPPTAPDCLPPAE" ; affx:hasCds [affx:startsAt "139202923" ; affx:stopsAt "139208279" ]; affx:hasExon [ affx:relatesToExon :Gene4426_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4426_e3; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4426_e4; affx:cdsType "Partial" ; affx:cdsStart "139202923" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e6; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e10; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e12; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e13; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e14; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e16; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e18; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e19; affx:cdsType "Partial" ; affx:cdsStop "139208279" ; affx:frame "0"] ; . :gi6678626 a affx:Transcript ; affx:unigene "iMm.4340" ; affx:translatesTo "MDFPQHSQRVLEQLNQQRQLGLLCDCTFVVDGVDFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVASFLQMQDIVTACHTLKSLAEPSSTTGESADASAVEGGDKRAKDEKAAATMLSRLDQARGSSSTGPGRELKEERGGQAESASSGAEQTEKADAPREPPPVELKPDPTSSMAAAEAEALSESSEQEMEVEPASKGEDGQEEEGAGPATVKEEGMHLDNGEPPEENEESAGTDSGQELGMEGQNLRSGTYGDRTESKAYGSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCTHCQRQFADPGALQRHVRIHTGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGGEVSVVTVDDMVTLATEALAATAVTQLTVVPVGAAVTADETEVLKAEISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQALVMFQTDADFYQQYGPGSTWPAGQMLQAGELVFRPRDGTEGQPTLAESPPTAPDCLPPAE" ; affx:hasCds [affx:startsAt "139202923" ; affx:stopsAt "139208279" ]; affx:hasExon [ affx:relatesToExon :Gene4426_e2; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4426_e3; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4426_e4; affx:cdsType "Partial" ; affx:cdsStart "139202923" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e6; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e10; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e12; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e13; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e14; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e15; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e17; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4426_e20; affx:cdsType "Partial" ; affx:cdsStop "139208279" ; affx:frame "0"] ; . :Gene4426_e1 a affx:Exon ; affx:startsAt "139185747" ; affx:stopsAt "139185875" ; affx:commonToAll "0" . :Gene4426_e2 a affx:Exon ; affx:startsAt "139185756" ; affx:stopsAt "139185875" ; affx:commonToAll "0" . :Gene4426_e3 a affx:Exon ; affx:startsAt "139188420" ; affx:stopsAt "139188507" ; affx:commonToAll "1" . :Gene4426_e4 a affx:Exon ; affx:startsAt "139202921" ; affx:stopsAt "139203128" ; affx:commonToAll "1" . :Gene4426_e5 a affx:Exon ; affx:startsAt "139203687" ; affx:stopsAt "139203876" ; affx:commonToAll "1" . :Gene4426_e6 a affx:Exon ; affx:startsAt "139204419" ; affx:stopsAt "139204560" ; affx:commonToAll "1" . :Gene4426_e7 a affx:Exon ; affx:startsAt "139204825" ; affx:stopsAt "139204948" ; affx:commonToAll "1" . :Gene4426_e8 a affx:Exon ; affx:startsAt "139205389" ; affx:stopsAt "139205631" ; affx:commonToAll "1" . :Gene4426_e9 a affx:Exon ; affx:startsAt "139205712" ; affx:stopsAt "139205855" ; affx:commonToAll "1" . :Gene4426_e10 a affx:Exon ; affx:startsAt "139205941" ; affx:stopsAt "139206242" ; affx:commonToAll "1" . :Gene4426_e11 a affx:Exon ; affx:startsAt "139206501" ; affx:stopsAt "139206589" ; affx:commonToAll "1" . :Gene4426_e12 a affx:Exon ; affx:startsAt "139206676" ; affx:stopsAt "139206793" ; affx:commonToAll "1" . :Gene4426_e13 a affx:Exon ; affx:startsAt "139206874" ; affx:stopsAt "139206995" ; affx:commonToAll "1" . :Gene4426_e14 a affx:Exon ; affx:startsAt "139207129" ; affx:stopsAt "139207260" ; affx:commonToAll "1" . :Gene4426_e15 a affx:Exon ; affx:startsAt "139207500" ; affx:stopsAt "139207705" ; affx:commonToAll "0" . :Gene4426_e16 a affx:Exon ; affx:startsAt "139207500" ; affx:stopsAt "139207710" ; affx:commonToAll "0" . :Gene4426_e17 a affx:Exon ; affx:startsAt "139207821" ; affx:stopsAt "139207916" ; affx:commonToAll "0" . :Gene4426_e18 a affx:Exon ; affx:startsAt "139207826" ; affx:stopsAt "139207916" ; affx:commonToAll "0" . :Gene4426_e19 a affx:Exon ; affx:startsAt "139207995" ; affx:stopsAt "139208378" ; affx:commonToAll "0" . :Gene4426_e20 a affx:Exon ; affx:startsAt "139207995" ; affx:stopsAt "139208382" ; affx:commonToAll "0" . :Gene4427 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi3219161] . :gi3219161 a affx:Transcript ; affx:unigene "iMm.12971" ; affx:translatesTo "MALLDLAQEGMALFGFVLFVVLWLMHFMSIIYTRLHLNKKATDKQPYSKLPGVSLLKPLKGVDPNLINNLETFFELDYPKYEVLLCVQDHDDPAIDVCKKLLGKYPNVDARLFIGGKKVGINPKINNLMPAYEVAKYDLIWICDSGIRVIPDTLTDMVNQMTEKVGLVHGLPYVADRQGFAATLEQVYFGTSHPRSYISANVTGFKCVTGMSCLMRKDVLDQAGGLIAFAQYIAEDYFMAKAIADRGWRFSMSTQVAMQNSGSYSISQFQSRMIRWTKLRINMLPATIICEPISECFVASLIIGWAAHHVFRWDIMVFFMCHCLAWFIFDYIQLRGVQGGTLCFSKLDYAVAWFIRESMTIYIFLSALWDPTISWRTGRYRLRCGGTAEEILDV" ; affx:hasCds [affx:startsAt "58108890" ; affx:stopsAt "58140314" ]; affx:hasExon [ affx:relatesToExon :Gene4427_e1; affx:cdsType "Partial" ; affx:cdsStart "58108890" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e7; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4427_e9; affx:cdsType "Partial" ; affx:cdsStop "58140314" ; affx:frame "2"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "33" ; affx:spannedBy [ affx:startsAt "58108890" ; affx:stopsAt "58108988" ; affx:inFrame "0" ] ; affx:spannedBy [ affx:startsAt "58127680" ; affx:stopsAt "58127681" ; affx:inFrame "2" ] ; ] ; ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "2" ; affx:containsMotif [ affx:startsAt "283" ; affx:stopsAt "305" ; affx:spannedBy [ affx:startsAt "58139434" ; affx:stopsAt "58139500" ; affx:inFrame "2" ] ; ] ; affx:containsMotif [ affx:startsAt "310" ; affx:stopsAt "329" ; affx:spannedBy [ affx:startsAt "58139515" ; affx:stopsAt "58139572" ; affx:inFrame "2" ] ; ] ; ] ; . :Gene4427_e1 a affx:Exon ; affx:startsAt "58108705" ; affx:stopsAt "58108988" ; affx:commonToAll "1" . :Gene4427_e2 a affx:Exon ; affx:startsAt "58127680" ; affx:stopsAt "58127822" ; affx:commonToAll "1" . :Gene4427_e3 a affx:Exon ; affx:startsAt "58131796" ; affx:stopsAt "58131899" ; affx:commonToAll "1" . :Gene4427_e4 a affx:Exon ; affx:startsAt "58133079" ; affx:stopsAt "58133181" ; affx:commonToAll "1" . :Gene4427_e5 a affx:Exon ; affx:startsAt "58133785" ; affx:stopsAt "58133898" ; affx:commonToAll "1" . :Gene4427_e6 a affx:Exon ; affx:startsAt "58136956" ; affx:stopsAt "58137135" ; affx:commonToAll "1" . :Gene4427_e7 a affx:Exon ; affx:startsAt "58138415" ; affx:stopsAt "58138502" ; affx:commonToAll "1" . :Gene4427_e8 a affx:Exon ; affx:startsAt "58139409" ; affx:stopsAt "58139599" ; affx:commonToAll "1" . :Gene4427_e9 a affx:Exon ; affx:startsAt "58140143" ; affx:stopsAt "58140467" ; affx:commonToAll "1" . :Xpa a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi7106448] . :gi7106448 a affx:Transcript ; affx:unigene "iMm.4049" ; affx:translatesTo "MATAEEKQTSPEPVAADEPAQLPAAVRASVERKRQRALMLRQARLAARPYPAAAATGGVASVKAAPKMIDTKGGFILEEEEEKHEIGNIVHEPGPVMEFDYTICEECGKEFMDSYLMNHFDLPTCDSCRDADDKHKLITKTEAKQEYLLKDCDLEKREPALRFLVKKNPRHSQWGDMKLYLKLQVVKRALEVWGSQEALEDAKEVRQENREKMKQKKFDKKVKELRRAIRSSVWKRETTTHQHKYGPEENLEDDMYRKTCTLCGHELTYEKM" ; affx:hasCds [affx:startsAt "45012071" ; affx:stopsAt "45032619" ]; affx:hasExon [ affx:relatesToExon :Xpa_e1; affx:cdsType "Partial" ; affx:cdsStart "45012071" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Xpa_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Xpa_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Xpa_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Xpa_e5; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Xpa_e6; affx:cdsType "Partial" ; affx:cdsStop "45032619" ; affx:frame "0"] ; . :Xpa_e1 a affx:Exon ; affx:startsAt "45012043" ; affx:stopsAt "45012220" ; affx:commonToAll "1" . :Xpa_e2 a affx:Exon ; affx:startsAt "45019922" ; affx:stopsAt "45020040" ; affx:commonToAll "1" . :Xpa_e3 a affx:Exon ; affx:startsAt "45021092" ; affx:stopsAt "45021258" ; affx:commonToAll "1" . :Xpa_e4 a affx:Exon ; affx:startsAt "45022395" ; affx:stopsAt "45022501" ; affx:commonToAll "1" . :Xpa_e5 a affx:Exon ; affx:startsAt "45029448" ; affx:stopsAt "45029556" ; affx:commonToAll "1" . :Xpa_e6 a affx:Exon ; affx:startsAt "45032447" ; affx:stopsAt "45032710" ; affx:commonToAll "1" . :Wdr8 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi10946907] ; affx:hasVariant [affx:representedBy :gi16507945] . :gi10946907 a affx:Transcript ; affx:unigene "iMm.46508" ; affx:translatesTo "MNFSESFKLSGLLCRFSPDGKYLASCVQYRLVIRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWSLCTKSVSYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAAWDTCLEYKVLLYSLDGRLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDGKVRLLNHVTWKMITEFGHPATINNPKTVVYKEAEKSPLLGLGHLSFPPPRAMAGALSTSESKYEIASGPVSLQTLKPVADRANPRMGVGMLAFSSDSYFLASRNDNVPNAVWIWDIQKLKLFVVLEHMSPVRSFQWDPQQPRLAICTGGSKVYLWSPAGCVSVQVPGEGDFPVLGLCWHLSGDSLALLSKDHFCLCFLETKERVGTAYEQRDGMPRT" ; affx:hasCds [affx:startsAt "149578266" ; affx:stopsAt "149592433" ]; affx:hasExon [ affx:relatesToExon :Wdr8_e1; affx:cdsType "Partial" ; affx:cdsStart "149578266" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e11; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e12; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e14; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e15; affx:cdsType "Partial" ; affx:cdsStop "149592433" ; affx:frame "1"] ; . :gi16507945 a affx:Transcript ; affx:unigene "iMm.46508" ; affx:translatesTo "MNFSESFKLSGLLCRFSPDGKYLASCVQYRLVIRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWSLCTKSVSYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAAWDTCLEYKVLLYSLDGRLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDGKVRLLNHVTWKMITEFGHPATINNPKTVSLHTLPPEHRGLPGAGSRP" ; affx:hasCds [affx:startsAt "149578266" ; affx:stopsAt "149588686" ]; affx:hasExon [ affx:relatesToExon :Wdr8_e2; affx:cdsType "Partial" ; affx:cdsStart "149578266" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e10; affx:cdsType "Partial" ; affx:cdsStop "149588686" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Wdr8_e13; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Wdr8_e16; affx:cdsType "None" ] ; . :Wdr8_e1 a affx:Exon ; affx:startsAt "149578213" ; affx:stopsAt "149578335" ; affx:commonToAll "0" . :Wdr8_e2 a affx:Exon ; affx:startsAt "149578230" ; affx:stopsAt "149578335" ; affx:commonToAll "0" . :Wdr8_e3 a affx:Exon ; affx:startsAt "149581064" ; affx:stopsAt "149581217" ; affx:commonToAll "1" . :Wdr8_e4 a affx:Exon ; affx:startsAt "149582312" ; affx:stopsAt "149582429" ; affx:commonToAll "1" . :Wdr8_e5 a affx:Exon ; affx:startsAt "149584530" ; affx:stopsAt "149584603" ; affx:commonToAll "1" . :Wdr8_e6 a affx:Exon ; affx:startsAt "149587380" ; affx:stopsAt "149587484" ; affx:commonToAll "1" . :Wdr8_e7 a affx:Exon ; affx:startsAt "149588090" ; affx:stopsAt "149588177" ; affx:commonToAll "1" . :Wdr8_e8 a affx:Exon ; affx:startsAt "149588313" ; affx:stopsAt "149588448" ; affx:commonToAll "1" . :Wdr8_e9 a affx:Exon ; affx:startsAt "149588545" ; affx:stopsAt "149588623" ; affx:commonToAll "0" . :Wdr8_e10 a affx:Exon ; affx:startsAt "149588545" ; affx:stopsAt "149590393" ; affx:commonToAll "0" . :Wdr8_e11 a affx:Exon ; affx:startsAt "149590287" ; affx:stopsAt "149590393" ; affx:commonToAll "0" . :Wdr8_e12 a affx:Exon ; affx:startsAt "149590993" ; affx:stopsAt "149591119" ; affx:commonToAll "0" . :Wdr8_e13 a affx:Exon ; affx:startsAt "149590993" ; affx:stopsAt "149592045" ; affx:commonToAll "0" . :Wdr8_e14 a affx:Exon ; affx:startsAt "149591853" ; affx:stopsAt "149592045" ; affx:commonToAll "0" . :Wdr8_e15 a affx:Exon ; affx:startsAt "149592284" ; affx:stopsAt "149592568" ; affx:commonToAll "0" . :Wdr8_e16 a affx:Exon ; affx:startsAt "149592284" ; affx:stopsAt "149592569" ; affx:commonToAll "0" . :Uts2 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6755930] . :gi6755930 a affx:Transcript ; affx:unigene "iMm.89984" ; affx:translatesTo "MDRVPFCCLLFIGLLNPLLSLPVTDTGERTLQLPVLEEDALRALEELERMALLQTLRQTMGTEAGESPGEAGPSTETPTPRGSMRKAFAGQNSNTVLSRLLARTRKQHKQHGAAPECFWKYCI" ; affx:hasCds [affx:startsAt "146392715" ; affx:stopsAt "146397263" ]; affx:hasExon [ affx:relatesToExon :Uts2_e1; affx:cdsType "Partial" ; affx:cdsStart "146392715" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Uts2_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Uts2_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Uts2_e4; affx:cdsType "Partial" ; affx:cdsStop "146397263" ; affx:frame "0"] ; . :Uts2_e1 a affx:Exon ; affx:startsAt "146392679" ; affx:stopsAt "146392818" ; affx:commonToAll "1" . :Uts2_e2 a affx:Exon ; affx:startsAt "146394619" ; affx:stopsAt "146394730" ; affx:commonToAll "1" . :Uts2_e3 a affx:Exon ; affx:startsAt "146395723" ; affx:stopsAt "146395767" ; affx:commonToAll "1" . :Uts2_e4 a affx:Exon ; affx:startsAt "146397149" ; affx:stopsAt "146397393" ; affx:commonToAll "1" . :Hsc40 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi12484111] ; affx:hasVariant [affx:representedBy :gi9845258] . :gi12484111 a affx:Transcript ; affx:unigene "iMm.20437" ; affx:translatesTo "MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS" ; affx:hasCds [affx:startsAt "41785149" ; affx:stopsAt "41789526" ]; affx:hasExon [ affx:relatesToExon :Hsc40_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Hsc40_e4; affx:cdsType "Partial" ; affx:cdsStart "41785149" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsc40_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsc40_e6; affx:cdsType "Partial" ; affx:cdsStop "41789526" ; affx:frame "2"] ; . :gi9845258 a affx:Transcript ; affx:unigene "iMm.20437" ; affx:translatesTo "MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLPCS" ; affx:hasCds [affx:startsAt "41785149" ; affx:stopsAt "41789526" ]; affx:hasExon [ affx:relatesToExon :Hsc40_e2; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Hsc40_e3; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Hsc40_e4; affx:cdsType "Partial" ; affx:cdsStart "41785149" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsc40_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsc40_e7; affx:cdsType "Partial" ; affx:cdsStop "41789526" ; affx:frame "2"] ; . :Hsc40_e1 a affx:Exon ; affx:startsAt "41781893" ; affx:stopsAt "41781980" ; affx:commonToAll "0" . :Hsc40_e2 a affx:Exon ; affx:startsAt "41781950" ; affx:stopsAt "41781980" ; affx:commonToAll "0" . :Hsc40_e3 a affx:Exon ; affx:startsAt "41782774" ; affx:stopsAt "41782919" ; affx:commonToAll "0" . :Hsc40_e4 a affx:Exon ; affx:startsAt "41785115" ; affx:stopsAt "41785360" ; affx:commonToAll "1" . :Hsc40_e5 a affx:Exon ; affx:startsAt "41788500" ; affx:stopsAt "41789102" ; affx:commonToAll "1" . :Hsc40_e6 a affx:Exon ; affx:startsAt "41789292" ; affx:stopsAt "41789569" ; affx:commonToAll "0" . :Hsc40_e7 a affx:Exon ; affx:startsAt "41789292" ; affx:stopsAt "41789723" ; affx:commonToAll "0" . :Hsj2 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi3025863] . :gi3025863 a affx:Transcript ; affx:unigene "iMm.27897" ; affx:translatesTo "MVKETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYDKGGEQAIKEGGAGGGFGSPMDIFDMFFGGGGRMQRERRGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDEMDQVELVDFDPNQERRRHYNGEAYEDDEHHPRGGVQCQTS" ; affx:hasCds [affx:startsAt "40487265" ; affx:stopsAt "40496499" ]; affx:hasExon [ affx:relatesToExon :Hsj2_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Hsj2_e2; affx:cdsType "Partial" ; affx:cdsStart "40487265" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e5; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Hsj2_e9; affx:cdsType "Partial" ; affx:cdsStop "40496499" ; affx:frame "1"] ; . :Hsj2_e1 a affx:Exon ; affx:startsAt "40486105" ; affx:stopsAt "40486186" ; affx:commonToAll "1" . :Hsj2_e2 a affx:Exon ; affx:startsAt "40487255" ; affx:stopsAt "40487397" ; affx:commonToAll "1" . :Hsj2_e3 a affx:Exon ; affx:startsAt "40487525" ; affx:stopsAt "40487703" ; affx:commonToAll "1" . :Hsj2_e4 a affx:Exon ; affx:startsAt "40489657" ; affx:stopsAt "40489762" ; affx:commonToAll "1" . :Hsj2_e5 a affx:Exon ; affx:startsAt "40491508" ; affx:stopsAt "40491736" ; affx:commonToAll "1" . :Hsj2_e6 a affx:Exon ; affx:startsAt "40493725" ; affx:stopsAt "40493840" ; affx:commonToAll "1" . :Hsj2_e7 a affx:Exon ; affx:startsAt "40495236" ; affx:stopsAt "40495352" ; affx:commonToAll "1" . :Hsj2_e8 a affx:Exon ; affx:startsAt "40495628" ; affx:stopsAt "40495729" ; affx:commonToAll "1" . :Hsj2_e9 a affx:Exon ; affx:startsAt "40496280" ; affx:stopsAt "40497453" ; affx:commonToAll "1" . :Wnt-4 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi202401] . :gi202401 a affx:Transcript ; affx:unigene "iMm.20355" ; affx:translatesTo "MSPRSCLRSLRLLVFAVFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDRTVHGVSPQGFQWSGCSDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHGVSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPDFCEQDIRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAQVELAERCGCRFHWCCFVKCRQCQRLVEMHTCR" ; affx:hasCds [affx:startsAt "134880205" ; affx:stopsAt "134899746" ]; affx:hasExon [ affx:relatesToExon :Wnt-4_e1; affx:cdsType "Partial" ; affx:cdsStart "134880205" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Wnt-4_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wnt-4_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Wnt-4_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Wnt-4_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "22" ; affx:spannedBy [ affx:startsAt "134880205" ; affx:stopsAt "134880271" ; affx:inFrame "0" ] ; ] ; ] ; . :Wnt-4_e1 a affx:Exon ; affx:startsAt "134880160" ; affx:stopsAt "134880282" ; affx:commonToAll "1" . :Wnt-4_e2 a affx:Exon ; affx:startsAt "134891806" ; affx:stopsAt "134892042" ; affx:commonToAll "1" . :Wnt-4_e3 a affx:Exon ; affx:startsAt "134898271" ; affx:stopsAt "134898403" ; affx:commonToAll "1" . :Wnt-4_e4 a affx:Exon ; affx:startsAt "134898490" ; affx:stopsAt "134898633" ; affx:commonToAll "1" . :Wnt-4_e5 a affx:Exon ; affx:startsAt "134899278" ; affx:stopsAt "134899746" ; affx:commonToAll "1" . :P24 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi4323147] . :gi4323147 a affx:Transcript ; affx:unigene "iMm.29025" ; affx:translatesTo "MAALTDVQRLQSRVEELERWVYGPGGTRGSRKVADGLVKVQVALGNIASKRERVKILYKKIEDLIKYLDPEYIDRIAIPEASKLQFILAEEQFILSQVALLEQVNALVPVLDSASIKAVPEHAARLQRLAQIHIQQQDQCVAITEESKALLEGYNKTTMLLSKQFVQWDELLCQLEAAKQVKPAEE" ; affx:hasCds [affx:startsAt "41479350" ; affx:stopsAt "41487642" ]; affx:hasExon [ affx:relatesToExon :P24_e1; affx:cdsType "Partial" ; affx:cdsStart "41479350" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :P24_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :P24_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :P24_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :P24_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :P24_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :P24_e7; affx:cdsType "Partial" ; affx:cdsStop "41487642" ; affx:frame "2"] ; . :P24_e1 a affx:Exon ; affx:startsAt "41479127" ; affx:stopsAt "41479440" ; affx:commonToAll "1" . :P24_e2 a affx:Exon ; affx:startsAt "41479576" ; affx:stopsAt "41479636" ; affx:commonToAll "1" . :P24_e3 a affx:Exon ; affx:startsAt "41480576" ; affx:stopsAt "41480635" ; affx:commonToAll "1" . :P24_e4 a affx:Exon ; affx:startsAt "41481537" ; affx:stopsAt "41481621" ; affx:commonToAll "1" . :P24_e5 a affx:Exon ; affx:startsAt "41484017" ; affx:stopsAt "41484104" ; affx:commonToAll "1" . :P24_e6 a affx:Exon ; affx:startsAt "41484963" ; affx:stopsAt "41485048" ; affx:commonToAll "1" . :P24_e7 a affx:Exon ; affx:startsAt "41487546" ; affx:stopsAt "41487644" ; affx:commonToAll "1" . :Dffb a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6681184] . :gi6681184 a affx:Transcript ; affx:unigene "iMm.86386" ; affx:translatesTo "MCAVLRQPKCVKLRALHSACKFGVAARSCQELLRKGCVRFQLPMPGSRLCLYEDGTEVTDDCFPGLPNDAELLLLTAGETWHGYVSDITRFLSVFNEPHAGVIQAARQLLSDEQAPLRQKLLADLLHHVSQNITAETREQDPSWFEGLESRFRNKSGYLRYSCESRIRGYLREVSAYTSMVDEAAQEEYLRVLGSMCQKLKSVQYNGSYFDRGAEASSRLCTPEGWFSCQGPFDLESCLSKHSINPYGNRESRILFSTWNLDHIIEKKRTVVPTLAEAIQDGREVNWEYFYSLLFTAENLKLVHIACHKKTTHKLECDRSRIYRPQTGSRRKQPARKKRPARKR" ; affx:hasCds [affx:startsAt "149398759" ; affx:stopsAt "149408379" ]; affx:hasExon [ affx:relatesToExon :Dffb_e1; affx:cdsType "Partial" ; affx:cdsStart "149398759" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dffb_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dffb_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dffb_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dffb_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dffb_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dffb_e7; affx:cdsType "Full" ; affx:frame "2"] ; . :Dffb_e1 a affx:Exon ; affx:startsAt "149398756" ; affx:stopsAt "149399003" ; affx:commonToAll "1" . :Dffb_e2 a affx:Exon ; affx:startsAt "149402482" ; affx:stopsAt "149402583" ; affx:commonToAll "1" . :Dffb_e3 a affx:Exon ; affx:startsAt "149403330" ; affx:stopsAt "149403501" ; affx:commonToAll "1" . :Dffb_e4 a affx:Exon ; affx:startsAt "149404970" ; affx:stopsAt "149405050" ; affx:commonToAll "1" . :Dffb_e5 a affx:Exon ; affx:startsAt "149406169" ; affx:stopsAt "149406358" ; affx:commonToAll "1" . :Dffb_e6 a affx:Exon ; affx:startsAt "149407958" ; affx:stopsAt "149408085" ; affx:commonToAll "1" . :Dffb_e7 a affx:Exon ; affx:startsAt "149408256" ; affx:stopsAt "149408379" ; affx:commonToAll "1" . :DI01 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi1323552] . :gi1323552 a affx:Transcript ; affx:unigene "iMm.2774" ; affx:translatesTo "MGLPQLWLWLKRLVIFLQVALEVAVGKVLMTLFPGRVKQSILAMGQKTGMARNPRFAPDNWVPTFFSIQYFWFVLKVRWQRLEDRAEFGGLAPNCTVVCLSGQKCNIWDFIQGSRPLVLNFGSCT" ; affx:hasCds [affx:startsAt "105024881" ; affx:stopsAt "105034205" ]; affx:hasExon [ affx:relatesToExon :DI01_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :DI01_e2; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :DI01_e3; affx:cdsType "Partial" ; affx:cdsStart "105024881" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :DI01_e4; affx:cdsType "Partial" ; affx:cdsStop "105034205" ; affx:frame "0"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "26" ; affx:spannedBy [ affx:startsAt "105034127" ; affx:stopsAt "105034205" ; affx:inFrame "0" ] ; ] ; ] ; . :DI01_e1 a affx:Exon ; affx:startsAt "105018232" ; affx:stopsAt "105019181" ; affx:commonToAll "1" . :DI01_e2 a affx:Exon ; affx:startsAt "105020507" ; affx:stopsAt "105020707" ; affx:commonToAll "1" . :DI01_e3 a affx:Exon ; affx:startsAt "105024778" ; affx:stopsAt "105024922" ; affx:commonToAll "1" . :DI01_e4 a affx:Exon ; affx:startsAt "105033868" ; affx:stopsAt "105034230" ; affx:commonToAll "1" . :Ptprf a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi11761807] . :gi11761807 a affx:Transcript ; affx:unigene "iMm.29855" ; affx:translatesTo "MAPEPAPGRRMVPLVPALVMLGLMAGAHGDSKPVFVKVPEDQTGLSGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYECTATNSLGEINTSAKLSVLEEDQLPSGFPTIDMGPQLKVVEKGRTATMLCAAGGNPDPEISWFKDFLPVDPAASNGRIKQLRSGALQIESSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSSQEVMPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMPVGRNVLELSNVMRSANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNTEPVSFYGIQYRAAGTDGPFQEVDGVASTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQAPSSPPRRVQARMLSASTMLVQWEPPEEPNGLVRGYRVYYTPDSRRPLSAWHKHNTDAGLLTTVGSLLPGITYSLRVLAFTAVGDGPPSPTIQVKTQQGVPAQPADFQANAESDTRIQLSWLLPPQERIVKYELVYWAAEDEGQQHKVTFDPTSSYTLEDLKPDTLYHFQLAARSDLGVGVFTPTVEARTAQSTPSAPPQKVTCVSTGSTTVRVSWVPPPADSRNGIITQYSVAYEAVDGEDRKRHVVDGISREHSSWDLLGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVEVEPLNSTAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQETTISGLTPETTYSITVAAYTTKGDGARSKPKVVTTTGAVPGRPTMMVSTTAMHTALLQWHPPKELPGELLGYRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATYVFRLAAKNRAGPGEEFEKEITTPEDVPSGFPQNLRVTGLTTSTTELTWDPPVLAERNGHITNYTVVYRDINSQLELQNVTNDTHLTLLGLKPDTTYDIKVRAHTSKGAGPLSPSIQSRTMPVEQVFAKNFRVAAAMKTSVLLSWEVPDSYKSAVPFKILYNGQSVEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPQKPLPASAFIEDGRFSLSMPQVQDPSLVRWFYIVVVPIDRVGGNLLAPRWNTPEELELDELLEAIEQGEEKQRRRRRQAERLKPYVAAQVDVLPDTFTLGDKKSYRGFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEIVVQVTPAQQQEEPEMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLKDSLLAHSSDPVEMRRLNYQTPGMRDHPPIPITDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNSEVNKPKNRYANVIAYDHSRVLLTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPVRGTETYGLIQVTLVDTVELATYTMRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAAMCGHTEVLARNLYAHIQKLGQVPPGESVTAMELEFKLLANSKAHTSRFVSANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT" ; affx:hasCds [affx:startsAt "115977052" ; affx:stopsAt "116044798" ]; affx:hasExon [ affx:relatesToExon :Ptprf_e1; affx:cdsType "Partial" ; affx:cdsStart "115977052" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e12; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e13; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e14; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e15; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e16; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e17; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e18; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e19; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e20; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e21; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e22; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e23; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e24; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e25; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e26; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e27; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e28; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e29; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e30; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Ptprf_e31; affx:cdsType "Partial" ; affx:cdsStop "116044798" ; affx:frame "0"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "29" ; affx:spannedBy [ affx:startsAt "116044711" ; affx:stopsAt "116044798" ; affx:inFrame "0" ] ; ] ; ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "1253" ; affx:stopsAt "1275" ; affx:spannedBy [ affx:startsAt "115990462" ; affx:stopsAt "115990528" ; affx:inFrame "2" ] ; ] ; ] ; . :Ptprf_e1 a affx:Exon ; affx:startsAt "115977032" ; affx:stopsAt "115977121" ; affx:commonToAll "1" . :Ptprf_e2 a affx:Exon ; affx:startsAt "115977600" ; affx:stopsAt "115977736" ; affx:commonToAll "1" . :Ptprf_e3 a affx:Exon ; affx:startsAt "115977848" ; affx:stopsAt "115978003" ; affx:commonToAll "1" . :Ptprf_e4 a affx:Exon ; affx:startsAt "115978232" ; affx:stopsAt "115978358" ; affx:commonToAll "1" . :Ptprf_e5 a affx:Exon ; affx:startsAt "115978590" ; affx:stopsAt "115978717" ; affx:commonToAll "1" . :Ptprf_e6 a affx:Exon ; affx:startsAt "115978931" ; affx:stopsAt "115979110" ; affx:commonToAll "1" . :Ptprf_e7 a affx:Exon ; affx:startsAt "115979195" ; affx:stopsAt "115979481" ; affx:commonToAll "1" . :Ptprf_e8 a affx:Exon ; affx:startsAt "115979558" ; affx:stopsAt "115979713" ; affx:commonToAll "1" . :Ptprf_e9 a affx:Exon ; affx:startsAt "115979951" ; affx:stopsAt "115980071" ; affx:commonToAll "1" . :Ptprf_e10 a affx:Exon ; affx:startsAt "115980688" ; affx:stopsAt "115980864" ; affx:commonToAll "1" . :Ptprf_e11 a affx:Exon ; affx:startsAt "115980972" ; affx:stopsAt "115981096" ; affx:commonToAll "1" . :Ptprf_e12 a affx:Exon ; affx:startsAt "115984323" ; affx:stopsAt "115984421" ; affx:commonToAll "1" . :Ptprf_e13 a affx:Exon ; affx:startsAt "115987724" ; affx:stopsAt "115987840" ; affx:commonToAll "1" . :Ptprf_e14 a affx:Exon ; affx:startsAt "115990457" ; affx:stopsAt "115990612" ; affx:commonToAll "1" . :Ptprf_e15 a affx:Exon ; affx:startsAt "115990949" ; affx:stopsAt "115991168" ; affx:commonToAll "1" . :Ptprf_e16 a affx:Exon ; affx:startsAt "115991730" ; affx:stopsAt "115991824" ; affx:commonToAll "1" . :Ptprf_e17 a affx:Exon ; affx:startsAt "115991909" ; affx:stopsAt "115992163" ; affx:commonToAll "1" . :Ptprf_e18 a affx:Exon ; affx:startsAt "115992260" ; affx:stopsAt "115992358" ; affx:commonToAll "1" . :Ptprf_e19 a affx:Exon ; affx:startsAt "115993030" ; affx:stopsAt "115993609" ; affx:commonToAll "1" . :Ptprf_e20 a affx:Exon ; affx:startsAt "115993685" ; affx:stopsAt "115993803" ; affx:commonToAll "1" . :Ptprf_e21 a affx:Exon ; affx:startsAt "115997925" ; affx:stopsAt "115998119" ; affx:commonToAll "1" . :Ptprf_e22 a affx:Exon ; affx:startsAt "115998716" ; affx:stopsAt "115999022" ; affx:commonToAll "1" . :Ptprf_e23 a affx:Exon ; affx:startsAt "116002189" ; affx:stopsAt "116002334" ; affx:commonToAll "1" . :Ptprf_e24 a affx:Exon ; affx:startsAt "116002779" ; affx:stopsAt "116002916" ; affx:commonToAll "1" . :Ptprf_e25 a affx:Exon ; affx:startsAt "116003143" ; affx:stopsAt "116003725" ; affx:commonToAll "1" . :Ptprf_e26 a affx:Exon ; affx:startsAt "116004969" ; affx:stopsAt "116005239" ; affx:commonToAll "1" . :Ptprf_e27 a affx:Exon ; affx:startsAt "116016130" ; affx:stopsAt "116016241" ; affx:commonToAll "1" . :Ptprf_e28 a affx:Exon ; affx:startsAt "116024720" ; affx:stopsAt "116024909" ; affx:commonToAll "1" . :Ptprf_e29 a affx:Exon ; affx:startsAt "116036536" ; affx:stopsAt "116036678" ; affx:commonToAll "1" . :Ptprf_e30 a affx:Exon ; affx:startsAt "116036839" ; affx:stopsAt "116036985" ; affx:commonToAll "1" . :Ptprf_e31 a affx:Exon ; affx:startsAt "116044707" ; affx:stopsAt "116044805" ; affx:commonToAll "1" . :TOB3 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi18875395] . :gi18875395 a affx:Transcript ; affx:unigene "iMm.21881" ; affx:translatesTo "MSWLFGIKGPKGEGTGPPLPLPPAQPGAEGGGDRGAGDRPSPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRVQAEERRKTLTEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAIRRATVEREMELRHKNEMLRVEAEARARAKADRENADIIREQIRLKAAEHRQTILESIRTAGTLLGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATSVAGRYIEARLGKPSLVRETSRISVLEALRHPIQVSRRLVSRPQDALEGVILSPSLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVCFALPQREERERLVRMYFDKYVLKPATEGKQRLKVAQFDYGKKCSEVAQLTEGMSGREIAQLAVAWQAMAYSSEDGVLTEAMMDARVQDAVQQHQQKMQWLKVERPDSQTNKPPHPSLLSC" ; affx:hasCds [affx:startsAt "151192318" ; affx:stopsAt "151212134" ]; affx:hasExon [ affx:relatesToExon :TOB3_e1; affx:cdsType "Partial" ; affx:cdsStart "151192318" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :TOB3_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :TOB3_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e11; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e12; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e13; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :TOB3_e14; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :TOB3_e15; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :TOB3_e16; affx:cdsType "Partial" ; affx:cdsStop "151212134" ; affx:frame "0"] ; . :TOB3_e1 a affx:Exon ; affx:startsAt "151192294" ; affx:stopsAt "151192483" ; affx:commonToAll "1" . :TOB3_e2 a affx:Exon ; affx:startsAt "151197159" ; affx:stopsAt "151197268" ; affx:commonToAll "1" . :TOB3_e3 a affx:Exon ; affx:startsAt "151198444" ; affx:stopsAt "151198612" ; affx:commonToAll "1" . :TOB3_e4 a affx:Exon ; affx:startsAt "151199801" ; affx:stopsAt "151199872" ; affx:commonToAll "1" . :TOB3_e5 a affx:Exon ; affx:startsAt "151200287" ; affx:stopsAt "151200339" ; affx:commonToAll "1" . :TOB3_e6 a affx:Exon ; affx:startsAt "151201262" ; affx:stopsAt "151201387" ; affx:commonToAll "1" . :TOB3_e7 a affx:Exon ; affx:startsAt "151201603" ; affx:stopsAt "151201729" ; affx:commonToAll "1" . :TOB3_e8 a affx:Exon ; affx:startsAt "151201998" ; affx:stopsAt "151202055" ; affx:commonToAll "1" . :TOB3_e9 a affx:Exon ; affx:startsAt "151202567" ; affx:stopsAt "151202723" ; affx:commonToAll "1" . :TOB3_e10 a affx:Exon ; affx:startsAt "151204697" ; affx:stopsAt "151204767" ; affx:commonToAll "1" . :TOB3_e11 a affx:Exon ; affx:startsAt "151205012" ; affx:stopsAt "151205178" ; affx:commonToAll "1" . :TOB3_e12 a affx:Exon ; affx:startsAt "151205887" ; affx:stopsAt "151205957" ; affx:commonToAll "1" . :TOB3_e13 a affx:Exon ; affx:startsAt "151206809" ; affx:stopsAt "151206869" ; affx:commonToAll "1" . :TOB3_e14 a affx:Exon ; affx:startsAt "151207191" ; affx:stopsAt "151207293" ; affx:commonToAll "1" . :TOB3_e15 a affx:Exon ; affx:startsAt "151208222" ; affx:stopsAt "151208299" ; affx:commonToAll "1" . :TOB3_e16 a affx:Exon ; affx:startsAt "151211932" ; affx:stopsAt "151212201" ; affx:commonToAll "1" . :Gabrd a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi17225454] . :gi17225454 a affx:Transcript ; affx:unigene "iMm.213198" ; affx:translatesTo "MDVLGWLLLPLLLLCTQPHHGARAMNDIGDYVGSNLEISWLPNLDGLMEGYARNFRPGIGGAPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELMNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKKRKAKVKVTKPRAEMDVRNAIVLFSLSAAGVSQELAISRRQGRVPGNLMGSYRSVEVEAKKEGGSRPGGPGGIRSRLKPIDADTIDIYARAVFPAAFAAVNIIYWAAYTM" ; affx:hasCds [affx:startsAt "150836991" ; affx:stopsAt "150849553" ]; affx:hasExon [ affx:relatesToExon :Gabrd_e1; affx:cdsType "Partial" ; affx:cdsStart "150836991" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e5; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e6; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e8; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gabrd_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "21" ; affx:spannedBy [ affx:startsAt "150849490" ; affx:stopsAt "150849553" ; affx:inFrame "1" ] ; ] ; ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "4" ; affx:containsMotif [ affx:startsAt "249" ; affx:stopsAt "271" ; affx:spannedBy [ affx:startsAt "150838027" ; affx:stopsAt "150838093" ; affx:inFrame "0" ] ; ] ; affx:containsMotif [ affx:startsAt "278" ; affx:stopsAt "297" ; affx:spannedBy [ affx:startsAt "150837993" ; affx:stopsAt "150838006" ; affx:inFrame "0" ] ; affx:spannedBy [ affx:startsAt "150837693" ; affx:stopsAt "150837737" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "312" ; affx:stopsAt "334" ; affx:spannedBy [ affx:startsAt "150837582" ; affx:stopsAt "150837648" ; affx:inFrame "1" ] ; ] ; affx:containsMotif [ affx:startsAt "426" ; affx:stopsAt "448" ; affx:spannedBy [ affx:startsAt "150836997" ; affx:stopsAt "150837063" ; affx:inFrame "0" ] ; ] ; ] ; . :Gabrd_e1 a affx:Exon ; affx:startsAt "150836988" ; affx:stopsAt "150837282" ; affx:commonToAll "1" . :Gabrd_e2 a affx:Exon ; affx:startsAt "150837525" ; affx:stopsAt "150837737" ; affx:commonToAll "1" . :Gabrd_e3 a affx:Exon ; affx:startsAt "150837993" ; affx:stopsAt "150838149" ; affx:commonToAll "1" . :Gabrd_e4 a affx:Exon ; affx:startsAt "150838744" ; affx:stopsAt "150838882" ; affx:commonToAll "1" . :Gabrd_e5 a affx:Exon ; affx:startsAt "150839448" ; affx:stopsAt "150839531" ; affx:commonToAll "1" . :Gabrd_e6 a affx:Exon ; affx:startsAt "150839845" ; affx:stopsAt "150840066" ; affx:commonToAll "1" . :Gabrd_e7 a affx:Exon ; affx:startsAt "150840156" ; affx:stopsAt "150840224" ; affx:commonToAll "1" . :Gabrd_e8 a affx:Exon ; affx:startsAt "150840524" ; affx:stopsAt "150840637" ; affx:commonToAll "1" . :Gabrd_e9 a affx:Exon ; affx:startsAt "150849485" ; affx:stopsAt "150849553" ; affx:commonToAll "1" . :Txn1 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6755910] . :gi6755910 a affx:Transcript ; affx:unigene "iMm.1275" ; affx:translatesTo "MVKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEYA" ; affx:hasCds [affx:startsAt "56851179" ; affx:stopsAt "56864955" ]; affx:hasExon [ affx:relatesToExon :Txn1_e1; affx:cdsType "Partial" ; affx:cdsStart "56851179" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Txn1_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Txn1_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Txn1_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Txn1_e5; affx:cdsType "Partial" ; affx:cdsStop "56864955" ; affx:frame "2"] ; . :Txn1_e1 a affx:Exon ; affx:startsAt "56851033" ; affx:stopsAt "56851242" ; affx:commonToAll "1" . :Txn1_e2 a affx:Exon ; affx:startsAt "56852419" ; affx:stopsAt "56852485" ; affx:commonToAll "1" . :Txn1_e3 a affx:Exon ; affx:startsAt "56859583" ; affx:stopsAt "56859643" ; affx:commonToAll "1" . :Txn1_e4 a affx:Exon ; affx:startsAt "56860541" ; affx:stopsAt "56860646" ; affx:commonToAll "1" . :Txn1_e5 a affx:Exon ; affx:startsAt "56864931" ; affx:stopsAt "56865029" ; affx:commonToAll "1" . :Gene4441 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi18034091] . :gi18034091 a affx:Transcript ; affx:unigene "iMm.200409" ; affx:translatesTo "MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDLCRRSVRLALGKERLGAIPALPLPASLKAYLLYQ" ; affx:hasCds [affx:startsAt "145290250" ; affx:stopsAt "145299199" ]; affx:hasExon [ affx:relatesToExon :Gene4441_e1; affx:cdsType "Partial" ; affx:cdsStart "145290250" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4441_e2; affx:cdsType "Partial" ; affx:cdsStop "145299199" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4441_e3; affx:cdsType "None" ] ; . :Gene4441_e1 a affx:Exon ; affx:startsAt "145290001" ; affx:stopsAt "145290378" ; affx:commonToAll "1" . :Gene4441_e2 a affx:Exon ; affx:startsAt "145298505" ; affx:stopsAt "145299347" ; affx:commonToAll "1" . :Gene4441_e3 a affx:Exon ; affx:startsAt "145301586" ; affx:stopsAt "145301821" ; affx:commonToAll "1" . :ICAT a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi9581838] . :gi9581838 a affx:Transcript ; affx:unigene "iMm.41537" ; affx:translatesTo "MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVSSQLSQLPQHSIDQGAEDVVMAFSRSETEDRRQ" ; affx:hasCds [affx:startsAt "144935445" ; affx:stopsAt "144954216" ]; affx:hasExon [ affx:relatesToExon :ICAT_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :ICAT_e2; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :ICAT_e3; affx:cdsType "Partial" ; affx:cdsStart "144935445" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :ICAT_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :ICAT_e5; affx:cdsType "Partial" ; affx:cdsStop "144954216" ; affx:frame "1"] ; . :ICAT_e1 a affx:Exon ; affx:startsAt "144908029" ; affx:stopsAt "144908085" ; affx:commonToAll "1" . :ICAT_e2 a affx:Exon ; affx:startsAt "144929538" ; affx:stopsAt "144929623" ; affx:commonToAll "1" . :ICAT_e3 a affx:Exon ; affx:startsAt "144935420" ; affx:stopsAt "144935541" ; affx:commonToAll "1" . :ICAT_e4 a affx:Exon ; affx:startsAt "144936111" ; affx:stopsAt "144936202" ; affx:commonToAll "1" . :ICAT_e5 a affx:Exon ; affx:startsAt "144954157" ; affx:stopsAt "144956389" ; affx:commonToAll "1" . :Dmbx1 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi16903550] ; affx:hasVariant [affx:representedBy :gi16903552] . :gi16903550 a affx:Transcript ; affx:unigene "iMm.213206" ; affx:translatesTo "MQHYGVNGYSLHAMNSLSAMYNLHQQAAQQAQHAPDYRPSVHALTLAERLAGCTFQDIILEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPPGLPSGDPPAELQLSLSEQSASESAPEDQLDREEDSRAEEPKAEKSPGSESKVPGCKRGSPKADSPGSLAITPAAPGGGLLGPSHSYSSSPLSLFRLQEQFRQHMAATNNLMHYSSFEVGGPAPAAAAAAAAAVPYLGVNMAPLSSLHCQSYYQSLSAAAAAHQGVWGSPLLPAPPTGLAPASAALNSKTTSIENLRLRAKQHAASLGLDTLPN" ; affx:hasCds [affx:startsAt "113680454" ; affx:stopsAt "113686306" ]; affx:hasExon [ affx:relatesToExon :Dmbx1_e1; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e5; affx:cdsType "Full" ; affx:frame "0"] ; . :gi16903552 a affx:Transcript ; affx:unigene "iMm.213206" ; affx:translatesTo "MQHYGVNGYSLHAMNSLSAMYNLHQQAAQQAQHAPDYRPSVHALTLAERLADIILEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPPGLPSGDPPAELQLSLSEQSASESAPEDQLDREEDSRAEEPKAEKSPGSESKVPGCKRGSPKADSPGSLAITPAAPGGGLLGPSHSYSSSPLSLFRLQEQFRQHMAATNNLMHYSSFEVGGPAPAAAAAAAAAVPYLGVNMAPLSSLHCQSYYQSLSAAAAAHQGVWGSPLLPAPPTGLAPASAALNSKTTSIENLRLRAKQHAASLGLDTLPN" ; affx:hasCds [affx:startsAt "113680454" ; affx:stopsAt "113686306" ]; affx:hasExon [ affx:relatesToExon :Dmbx1_e1; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Dmbx1_e5; affx:cdsType "Full" ; affx:frame "0"] ; . :Dmbx1_e1 a affx:Exon ; affx:startsAt "113680454" ; affx:stopsAt "113680909" ; affx:commonToAll "1" . :Dmbx1_e2 a affx:Exon ; affx:startsAt "113682477" ; affx:stopsAt "113682820" ; affx:commonToAll "1" . :Dmbx1_e3 a affx:Exon ; affx:startsAt "113683036" ; affx:stopsAt "113683215" ; affx:commonToAll "0" . :Dmbx1_e4 a affx:Exon ; affx:startsAt "113683036" ; affx:stopsAt "113683230" ; affx:commonToAll "0" . :Dmbx1_e5 a affx:Exon ; affx:startsAt "113686152" ; affx:stopsAt "113686306" ; affx:commonToAll "1" . :Gene4444 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi16307590] ; affx:hasVariant [affx:representedBy :gi18700019] . :gi16307590 a affx:Transcript ; affx:unigene "iMm.12267" ; affx:translatesTo "MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSALRQSGPRPALRHLAPTGVPTAVPNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVAAATS" ; affx:hasCds [affx:startsAt "120597095" ; affx:stopsAt "120611405" ]; affx:hasExon [ affx:relatesToExon :Gene4444_e1; affx:cdsType "Partial" ; affx:cdsStart "120597095" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e11; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e14; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e15; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e16; affx:cdsType "Partial" ; affx:cdsStop "120611405" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e17; affx:cdsType "None" ] ; . :gi18700019 a affx:Transcript ; affx:unigene "iMm.12267" ; affx:translatesTo "MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPASAILNQFQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSALRQSGPRPALRHLAPTGNAPASRGLPTTAQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVPNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVAAATS" ; affx:hasCds [affx:startsAt "120597095" ; affx:stopsAt "120611405" ]; affx:hasExon [ affx:relatesToExon :Gene4444_e2; affx:cdsType "Partial" ; affx:cdsStart "120597095" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e6; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e9; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e12; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e13; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e14; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e15; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4444_e16; affx:cdsType "Partial" ; affx:cdsStop "120611405" ; affx:frame "0"] ; . :Gene4444_e1 a affx:Exon ; affx:startsAt "120596765" ; affx:stopsAt "120597288" ; affx:commonToAll "0" . :Gene4444_e2 a affx:Exon ; affx:startsAt "120596844" ; affx:stopsAt "120597288" ; affx:commonToAll "0" . :Gene4444_e3 a affx:Exon ; affx:startsAt "120600160" ; affx:stopsAt "120600354" ; affx:commonToAll "1" . :Gene4444_e4 a affx:Exon ; affx:startsAt "120602439" ; affx:stopsAt "120602555" ; affx:commonToAll "1" . :Gene4444_e5 a affx:Exon ; affx:startsAt "120603679" ; affx:stopsAt "120603819" ; affx:commonToAll "1" . :Gene4444_e6 a affx:Exon ; affx:startsAt "120604351" ; affx:stopsAt "120604446" ; affx:commonToAll "1" . :Gene4444_e7 a affx:Exon ; affx:startsAt "120605056" ; affx:stopsAt "120605194" ; affx:commonToAll "1" . :Gene4444_e8 a affx:Exon ; affx:startsAt "120606187" ; affx:stopsAt "120606283" ; affx:commonToAll "1" . :Gene4444_e9 a affx:Exon ; affx:startsAt "120607895" ; affx:stopsAt "120608168" ; affx:commonToAll "1" . :Gene4444_e10 a affx:Exon ; affx:startsAt "120608316" ; affx:stopsAt "120608404" ; affx:commonToAll "1" . :Gene4444_e11 a affx:Exon ; affx:startsAt "120608525" ; affx:stopsAt "120608597" ; affx:commonToAll "0" . :Gene4444_e12 a affx:Exon ; affx:startsAt "120608525" ; affx:stopsAt "120608645" ; affx:commonToAll "0" . :Gene4444_e13 a affx:Exon ; affx:startsAt "120609073" ; affx:stopsAt "120609160" ; affx:commonToAll "0" . :Gene4444_e14 a affx:Exon ; affx:startsAt "120609253" ; affx:stopsAt "120609381" ; affx:commonToAll "1" . :Gene4444_e15 a affx:Exon ; affx:startsAt "120611002" ; affx:stopsAt "120611096" ; affx:commonToAll "1" . :Gene4444_e16 a affx:Exon ; affx:startsAt "120611184" ; affx:stopsAt "120611417" ; affx:commonToAll "1" . :Gene4444_e17 a affx:Exon ; affx:startsAt "120611836" ; affx:stopsAt "120612146" ; affx:commonToAll "0" . :Gene4445 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi13879462] . :gi13879462 a affx:Transcript ; affx:unigene "iMm.41978" ; affx:translatesTo "MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEDSNSLLLSLDSAGQTLRTEYDRLGFLLKLDSKLPAELATKYANFSEGACKPGYASAMMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLHCRRCIIVGNGGVLANKSLGSRIDDYDIVIRLNSAPVKGFERDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALHGCDEVAVAGFGYDMNTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSGI" ; affx:hasCds [affx:startsAt "115697713" ; affx:stopsAt "115874242" ]; affx:hasExon [ affx:relatesToExon :Gene4445_e1; affx:cdsType "Partial" ; affx:cdsStart "115697713" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e8; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e11; affx:cdsType "Partial" ; affx:cdsStop "115874242" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4445_e12; affx:cdsType "None" ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "0" ; affx:stopsAt "21" ; affx:spannedBy [ affx:startsAt "115874179" ; affx:stopsAt "115874242" ; affx:inFrame "0" ] ; ] ; ] ; . :Gene4445_e1 a affx:Exon ; affx:startsAt "115696824" ; affx:stopsAt "115697803" ; affx:commonToAll "1" . :Gene4445_e2 a affx:Exon ; affx:startsAt "115704436" ; affx:stopsAt "115704583" ; affx:commonToAll "1" . :Gene4445_e3 a affx:Exon ; affx:startsAt "115704780" ; affx:stopsAt "115704927" ; affx:commonToAll "1" . :Gene4445_e4 a affx:Exon ; affx:startsAt "115722856" ; affx:stopsAt "115723043" ; affx:commonToAll "1" . :Gene4445_e5 a affx:Exon ; affx:startsAt "115723503" ; affx:stopsAt "115723599" ; affx:commonToAll "1" . :Gene4445_e6 a affx:Exon ; affx:startsAt "115724426" ; affx:stopsAt "115724490" ; affx:commonToAll "1" . :Gene4445_e7 a affx:Exon ; affx:startsAt "115728758" ; affx:stopsAt "115728853" ; affx:commonToAll "1" . :Gene4445_e8 a affx:Exon ; affx:startsAt "115778883" ; affx:stopsAt "115778976" ; affx:commonToAll "1" . :Gene4445_e9 a affx:Exon ; affx:startsAt "115796151" ; affx:stopsAt "115796194" ; affx:commonToAll "1" . :Gene4445_e10 a affx:Exon ; affx:startsAt "115819367" ; affx:stopsAt "115819415" ; affx:commonToAll "1" . :Gene4445_e11 a affx:Exon ; affx:startsAt "115874127" ; affx:stopsAt "115874272" ; affx:commonToAll "1" . :Gene4445_e12 a affx:Exon ; affx:startsAt "115901582" ; affx:stopsAt "115901763" ; affx:commonToAll "1" . :Gene4446 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi14532254] . :gi14532254 a affx:Transcript ; affx:unigene "iMm.154312" ; affx:translatesTo "MSLLFSRCNSIVTVKKDKRHMAEVNASPLKHFVTAKKKINGIFEQLGAYIQESASFLEDTHRNTELDPVTTEEQVLDVKGYLSKVRGISEVLARRHMKVAFFGRTSNGKSTVINAMLWDKVLPSGIGHTTNCFLRVGGTDGHEAFLLTEGSEEKKSVKTVNQLAHALHQDEQLHAGSMVSVMWPNSKCPLLKDDLVLMDSPGIDVTTELDSWIDKFCLDADVFVLVANSESTLMQTEKQFFHKVSERLSRPNIFILNNRWDASASEPEYMEEVRRQHMERCTSFLVDELGVVDRAQAGDRIFFVSAKEVLSARVQKAQGMPEGGGALAEGFQVRMFEFQNFERQFEECISQSAVKTKFEQHTVRAKQIAEAVRLIMDSLHIAAQEQRVYCLEMREERQDRLRFIDKQLELLAQDYKLRIKQITEEVERQVSTAMAEEIRRLSVLVDEYQMDFHPSPVVLKVYKNELHRHIEEGLGRNLSDRCSTAIASSLQTMQQDMIDGLKPLLPVSMRNQIDMLVPRQCFSLSYDLNCDKLCADFQEDIEFHFSLGWTMLVNRFLGPKNSRRALLGYSDQVQRPLPLTPANPSMPPLPQSSLTQEELMVSMVTGLASLTSRTSMGILVVGGVVWKAVGWRLIALSFGLYGLLYVYERLTWTTKAKERAFKRQFVEYASEKLQLIISYTGSNCSHQVQQELSGTFAHLCQQVDITRDNLEQEIAAMNKKVEALDSLQSRAKLLRNKAGWLDSELNMFTHQYLQPSR" ; affx:hasCds [affx:startsAt "143234356" ; affx:stopsAt "143257486" ]; affx:hasExon [ affx:relatesToExon :Gene4446_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4446_e2; affx:cdsType "Partial" ; affx:cdsStart "143234356" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e4; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e7; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e8; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e12; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e13; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e14; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e15; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e16; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e17; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e18; affx:cdsType "Partial" ; affx:cdsStop "143257486" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4446_e19; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4446_e20; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Gene4446_e21; affx:cdsType "None" ] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "628" ; affx:stopsAt "647" ; affx:spannedBy [ affx:startsAt "143237809" ; affx:stopsAt "143237866" ; affx:inFrame "2" ] ; ] ; ] ; . :Gene4446_e1 a affx:Exon ; affx:startsAt "143232538" ; affx:stopsAt "143233798" ; affx:commonToAll "1" . :Gene4446_e2 a affx:Exon ; affx:startsAt "143233900" ; affx:stopsAt "143234426" ; affx:commonToAll "1" . :Gene4446_e3 a affx:Exon ; affx:startsAt "143235918" ; affx:stopsAt "143236053" ; affx:commonToAll "1" . :Gene4446_e4 a affx:Exon ; affx:startsAt "143237681" ; affx:stopsAt "143237878" ; affx:commonToAll "1" . :Gene4446_e5 a affx:Exon ; affx:startsAt "143238909" ; affx:stopsAt "143239065" ; affx:commonToAll "1" . :Gene4446_e6 a affx:Exon ; affx:startsAt "143240984" ; affx:stopsAt "143241205" ; affx:commonToAll "1" . :Gene4446_e7 a affx:Exon ; affx:startsAt "143241848" ; affx:stopsAt "143241951" ; affx:commonToAll "1" . :Gene4446_e8 a affx:Exon ; affx:startsAt "143242185" ; affx:stopsAt "143242290" ; affx:commonToAll "1" . :Gene4446_e9 a affx:Exon ; affx:startsAt "143242594" ; affx:stopsAt "143242721" ; affx:commonToAll "1" . :Gene4446_e10 a affx:Exon ; affx:startsAt "143244420" ; affx:stopsAt "143244542" ; affx:commonToAll "1" . :Gene4446_e11 a affx:Exon ; affx:startsAt "143244648" ; affx:stopsAt "143244716" ; affx:commonToAll "1" . :Gene4446_e12 a affx:Exon ; affx:startsAt "143245238" ; affx:stopsAt "143245392" ; affx:commonToAll "1" . :Gene4446_e13 a affx:Exon ; affx:startsAt "143246173" ; affx:stopsAt "143246281" ; affx:commonToAll "1" . :Gene4446_e14 a affx:Exon ; affx:startsAt "143246382" ; affx:stopsAt "143246491" ; affx:commonToAll "1" . :Gene4446_e15 a affx:Exon ; affx:startsAt "143247468" ; affx:stopsAt "143247593" ; affx:commonToAll "1" . :Gene4446_e16 a affx:Exon ; affx:startsAt "143248961" ; affx:stopsAt "143249124" ; affx:commonToAll "1" . :Gene4446_e17 a affx:Exon ; affx:startsAt "143253410" ; affx:stopsAt "143253546" ; affx:commonToAll "1" . :Gene4446_e18 a affx:Exon ; affx:startsAt "143257311" ; affx:stopsAt "143257490" ; affx:commonToAll "1" . :Gene4446_e19 a affx:Exon ; affx:startsAt "143261775" ; affx:stopsAt "143261858" ; affx:commonToAll "1" . :Gene4446_e20 a affx:Exon ; affx:startsAt "143262202" ; affx:stopsAt "143262345" ; affx:commonToAll "1" . :Gene4446_e21 a affx:Exon ; affx:startsAt "143263505" ; affx:stopsAt "143263552" ; affx:commonToAll "1" . :Cdkn2a a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi6753389] . :gi6753389 a affx:Transcript ; affx:unigene "iMm.4733" ; affx:translatesTo "MGRRFLVTVRIQRAGRPLQERVFLVKFVRSRRPRTASCALAFVNMLLRLERILRRGPHRNPGPGDDDGQRSRSSSSAQLRCRFELRGPHYLLPPGARRSAGRLPGHAGGAARVRGSAGCARCLGSPAARLGPRAGTSRHRAIFAFRWVLFVFRWVVFVYRWERRPDRRA" ; affx:hasCds [affx:startsAt "86726401" ; affx:stopsAt "86746827" ]; affx:hasExon [ affx:relatesToExon :Cdkn2a_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :Cdkn2a_e2; affx:cdsType "Partial" ; affx:cdsStart "86726401" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Cdkn2a_e3; affx:cdsType "Partial" ; affx:cdsStop "86746827" ; affx:frame "0"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "142" ; affx:stopsAt "159" ; affx:spannedBy [ affx:startsAt "86726434" ; affx:stopsAt "86726485" ; affx:inFrame "1" ] ; ] ; ] ; . :Cdkn2a_e1 a affx:Exon ; affx:startsAt "86724395" ; affx:stopsAt "86724533" ; affx:commonToAll "1" . :Cdkn2a_e2 a affx:Exon ; affx:startsAt "86726380" ; affx:stopsAt "86726721" ; affx:commonToAll "1" . :Cdkn2a_e3 a affx:Exon ; affx:startsAt "86746637" ; affx:stopsAt "86746869" ; affx:commonToAll "1" . :Gene4448 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi18381054] . :gi18381054 a affx:Transcript ; affx:unigene "iMm.145488" ; affx:translatesTo "MGDAPSPEEKLHLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTVYLELEKDFAAEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPPAKGPAKNSEPEEVIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCASVEGVSRQVEPLDPPAGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGFVSCKSLKGGNIS" ; affx:hasCds [affx:startsAt "126663352" ; affx:stopsAt "126691971" ]; affx:hasExon [ affx:relatesToExon :Gene4448_e1; affx:cdsType "Partial" ; affx:cdsStart "126663352" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e9; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e11; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e12; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4448_e13; affx:cdsType "Partial" ; affx:cdsStop "126691971" ; affx:frame "0"] ; . :Gene4448_e1 a affx:Exon ; affx:startsAt "126663236" ; affx:stopsAt "126663409" ; affx:commonToAll "1" . :Gene4448_e2 a affx:Exon ; affx:startsAt "126670166" ; affx:stopsAt "126670313" ; affx:commonToAll "1" . :Gene4448_e3 a affx:Exon ; affx:startsAt "126670449" ; affx:stopsAt "126670625" ; affx:commonToAll "1" . :Gene4448_e4 a affx:Exon ; affx:startsAt "126674105" ; affx:stopsAt "126674235" ; affx:commonToAll "1" . :Gene4448_e5 a affx:Exon ; affx:startsAt "126679645" ; affx:stopsAt "126679726" ; affx:commonToAll "1" . :Gene4448_e6 a affx:Exon ; affx:startsAt "126681457" ; affx:stopsAt "126681550" ; affx:commonToAll "1" . :Gene4448_e7 a affx:Exon ; affx:startsAt "126683168" ; affx:stopsAt "126683304" ; affx:commonToAll "1" . :Gene4448_e8 a affx:Exon ; affx:startsAt "126684009" ; affx:stopsAt "126684095" ; affx:commonToAll "1" . :Gene4448_e9 a affx:Exon ; affx:startsAt "126687378" ; affx:stopsAt "126687514" ; affx:commonToAll "1" . :Gene4448_e10 a affx:Exon ; affx:startsAt "126688087" ; affx:stopsAt "126688185" ; affx:commonToAll "1" . :Gene4448_e11 a affx:Exon ; affx:startsAt "126688655" ; affx:stopsAt "126688849" ; affx:commonToAll "1" . :Gene4448_e12 a affx:Exon ; affx:startsAt "126690107" ; affx:stopsAt "126690249" ; affx:commonToAll "1" . :Gene4448_e13 a affx:Exon ; affx:startsAt "126691860" ; affx:stopsAt "126692666" ; affx:commonToAll "1" . :Gene4449 a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi14715018] . :gi14715018 a affx:Transcript ; affx:unigene "iMm.28237" ; affx:translatesTo "MSYGPLDMYRNPGPSGPQPRDFNSIIQTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSASEQRQQKLQKERLMNDFSSALNNFQVVQRKVSEKEKESIARARAGSRLSAEDRQREEQLVSFDSHEEWNQMQSQEEEAAITEQDLELIKERETAIRQLEADILDVNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATDQLQRAAYYQKKSRKKMCILVLVLSVIVTVLVVVIWVASK" ; affx:hasCds [affx:startsAt "130420816" ; affx:stopsAt "130449851" ]; affx:hasExon [ affx:relatesToExon :Gene4449_e1; affx:cdsType "Partial" ; affx:cdsStart "130420816" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e4; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e5; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e7; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e8; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4449_e9; affx:cdsType "Partial" ; affx:cdsStop "130449851" ; affx:frame "0"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "251" ; affx:stopsAt "273" ; affx:spannedBy [ affx:startsAt "130420822" ; affx:stopsAt "130420888" ; affx:inFrame "0" ] ; ] ; ] ; . :Gene4449_e1 a affx:Exon ; affx:startsAt "130419709" ; affx:stopsAt "130420909" ; affx:commonToAll "1" . :Gene4449_e2 a affx:Exon ; affx:startsAt "130422650" ; affx:stopsAt "130422733" ; affx:commonToAll "1" . :Gene4449_e3 a affx:Exon ; affx:startsAt "130423769" ; affx:stopsAt "130423842" ; affx:commonToAll "1" . :Gene4449_e4 a affx:Exon ; affx:startsAt "130425894" ; affx:stopsAt "130426000" ; affx:commonToAll "1" . :Gene4449_e5 a affx:Exon ; affx:startsAt "130428176" ; affx:stopsAt "130428220" ; affx:commonToAll "1" . :Gene4449_e6 a affx:Exon ; affx:startsAt "130428509" ; affx:stopsAt "130428647" ; affx:commonToAll "1" . :Gene4449_e7 a affx:Exon ; affx:startsAt "130433521" ; affx:stopsAt "130433621" ; affx:commonToAll "1" . :Gene4449_e8 a affx:Exon ; affx:startsAt "130436942" ; affx:stopsAt "130437012" ; affx:commonToAll "1" . :Gene4449_e9 a affx:Exon ; affx:startsAt "130449733" ; affx:stopsAt "130449920" ; affx:commonToAll "1" . :Gene4450 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi17160845] . :gi17160845 a affx:Transcript ; affx:unigene "iMm.26698" ; affx:translatesTo "MSFRTMAKKSGILVWGILLCVSSCLALYENLVKCFQDPDYEAFLLIAQNGLHTSPLSKRVVVVGAGMAGLVAAKTLQDAGHEVTILEASNHIGGRVVTLRNKEEGWYLELGPMRIPESHKLIHTYVQKLGLKLNKFHQYDSNTWYLLNGQRYRASEVMANPGILGYPLRPSEKNKTVTDLFYQAITKIKPHRKTSNCSQLLSLYDSYSTKAYLMKEGTLSKGAIEMIGDIMNENAGYYKSLLESLRIASIFSKSDQFSEITGGFDQLPNGLSASLKPGTIRLGSKVERVVRDGPKVKVMYRTDGPTSALHKLTADYAIITASAKATRLITFQPPLSREKTHALRSVHYTSATKVVLVCNERFWEQDGIRGGYSITDRPSRFIYYPSHSLPGGKGVLLASFTVGDDSSFFAALKPNQVVDVVLDDLAAVHRIPKEELKRMCPKSAIKHWSLDPLTIGAFTEFTPYQFVDYSKQLSQPEGRIYFAGEHTCLPHSWIDTAIKSGIRASCNIQAAVDKEATRGHTAL" ; affx:hasCds [affx:startsAt "116863976" ; affx:stopsAt "116870534" ]; affx:hasExon [ affx:relatesToExon :Gene4450_e1; affx:cdsType "Partial" ; affx:cdsStart "116863976" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e2; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e3; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4450_e7; affx:cdsType "Partial" ; affx:cdsStop "116870534" ; affx:frame "1"] ; . :Gene4450_e1 a affx:Exon ; affx:startsAt "116863555" ; affx:stopsAt "116864007" ; affx:commonToAll "1" . :Gene4450_e2 a affx:Exon ; affx:startsAt "116865587" ; affx:stopsAt "116865802" ; affx:commonToAll "1" . :Gene4450_e3 a affx:Exon ; affx:startsAt "116866157" ; affx:stopsAt "116866270" ; affx:commonToAll "1" . :Gene4450_e4 a affx:Exon ; affx:startsAt "116867221" ; affx:stopsAt "116867423" ; affx:commonToAll "1" . :Gene4450_e5 a affx:Exon ; affx:startsAt "116869072" ; affx:stopsAt "116869141" ; affx:commonToAll "1" . :Gene4450_e6 a affx:Exon ; affx:startsAt "116869330" ; affx:stopsAt "116869467" ; affx:commonToAll "1" . :Gene4450_e7 a affx:Exon ; affx:startsAt "116869729" ; affx:stopsAt "116870876" ; affx:commonToAll "1" . :D4Wsu53e a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi12963774] . :gi12963774 a affx:Transcript ; affx:unigene "iMm.10009" ; affx:translatesTo "MSSAAMSKYVNDMWPGSPQEKASPSTSGSGRSSRLSSRSRSRSSSRSSRRDSRSSSRSSSRSHSRPRRSRRSRSRSRRRHQRKYRRYSRSYSRSRSRSRSHRYHRDSRYERPRRYYKSPSPYRSRSRSRSRGRSQHRWSYYAITRGRRYYGFGRTVYPEDRPRWRERSRTRSRSRSRTPFRLSEKDRMELLEIAKANAAKALGTANFDLPASLRAKEASQGTAVSSSGPKVEKS" ; affx:hasCds [affx:startsAt "132506820" ; affx:stopsAt "132508679" ]; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e1; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e2; affx:cdsType "Partial" ; affx:cdsStart "132506820" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e3; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e4; affx:cdsType "Partial" ; affx:cdsStop "132508679" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e5; affx:cdsType "None" ] ; affx:hasExon [ affx:relatesToExon :D4Wsu53e_e6; affx:cdsType "None" ] ; . :D4Wsu53e_e1 a affx:Exon ; affx:startsAt "132506538" ; affx:stopsAt "132506661" ; affx:commonToAll "1" . :D4Wsu53e_e2 a affx:Exon ; affx:startsAt "132506768" ; affx:stopsAt "132507376" ; affx:commonToAll "1" . :D4Wsu53e_e3 a affx:Exon ; affx:startsAt "132508186" ; affx:stopsAt "132508326" ; affx:commonToAll "1" . :D4Wsu53e_e4 a affx:Exon ; affx:startsAt "132508670" ; affx:stopsAt "132508715" ; affx:commonToAll "1" . :D4Wsu53e_e5 a affx:Exon ; affx:startsAt "132508919" ; affx:stopsAt "132509712" ; affx:commonToAll "1" . :D4Wsu53e_e6 a affx:Exon ; affx:startsAt "132509824" ; affx:stopsAt "132510266" ; affx:commonToAll "1" . :Gene4452 a affx:Gene ; affx:strand "+" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi14029262] . :gi14029262 a affx:Transcript ; affx:unigene "iMm.179304" ; affx:translatesTo "MSNNSNKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKKQLAAQSLVFNLKDKVFCELFPEVVEEIKQKQKAQDELSNRPQNLPLPDVVPDGELHRGQHGIQLLNGHAPAAGPNLAGLPQANRHHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE" ; affx:hasCds [affx:startsAt "151407716" ; affx:stopsAt "151416151" ]; affx:hasExon [ affx:relatesToExon :Gene4452_e1; affx:cdsType "Partial" ; affx:cdsStart "151407716" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Gene4452_e2; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Gene4452_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4452_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4452_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Gene4452_e6; affx:cdsType "Partial" ; affx:cdsStop "151416151" ; affx:frame "2"] ; affx:tmHMMHit [ affx:commonToAll "1" ; affx:motifCount "1" ; affx:containsMotif [ affx:startsAt "227" ; affx:stopsAt "249" ; affx:spannedBy [ affx:startsAt "151416052" ; affx:stopsAt "151416118" ; affx:inFrame "2" ] ; ] ; ] ; . :Gene4452_e1 a affx:Exon ; affx:startsAt "151407714" ; affx:stopsAt "151407847" ; affx:commonToAll "1" . :Gene4452_e2 a affx:Exon ; affx:startsAt "151410257" ; affx:stopsAt "151410298" ; affx:commonToAll "1" . :Gene4452_e3 a affx:Exon ; affx:startsAt "151414019" ; affx:stopsAt "151414122" ; affx:commonToAll "1" . :Gene4452_e4 a affx:Exon ; affx:startsAt "151414207" ; affx:stopsAt "151414346" ; affx:commonToAll "1" . :Gene4452_e5 a affx:Exon ; affx:startsAt "151415153" ; affx:stopsAt "151415234" ; affx:commonToAll "1" . :Gene4452_e6 a affx:Exon ; affx:startsAt "151415866" ; affx:stopsAt "151416494" ; affx:commonToAll "1" . :Erp44-pending a affx:Gene ; affx:strand "-" ; affx:chr "chr4" ; affx:hasVariant [affx:representedBy :gi19072791] . :gi19072791 a affx:Transcript ; affx:unigene "iMm.147685" ; affx:translatesTo "MNPAVFLSLADLRCSLLLLVTSIFTPITAEIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPVHEIQSLDEVTNLDRSKRNIIGYFEQKDSENYRVFERVASILHDDCAFLSAFGDLSKPERYNGDNVIYKPPGRSAPDMVYLGSMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKDDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQDQDVASSPPESSFQKLAPSEYRYTLLRDRDEL" ; affx:hasCds [affx:startsAt "47053343" ; affx:stopsAt "47138660" ]; affx:hasExon [ affx:relatesToExon :Erp44-pending_e1; affx:cdsType "Partial" ; affx:cdsStart "47053343" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e2; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e3; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e4; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e5; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e6; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e7; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e8; affx:cdsType "Full" ; affx:frame "1"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e9; affx:cdsType "Full" ; affx:frame "0"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e10; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e11; affx:cdsType "Full" ; affx:frame "2"] ; affx:hasExon [ affx:relatesToExon :Erp44-pending_e12; affx:cdsType "Partial" ; affx:cdsStop "47138660" ; affx:frame "2"] ; . :Erp44-pending_e1 a aff