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GeneChip Xenopus tropicalis Genome Array
GeneChip Xenopus tropicalis Genome Array
The GeneChip Xenopus tropicalis Genome Array contains probes to detect transcripts from X. tropicalis, one of the most important model organisms in developmental biology.
The GeneChip® Xenopus tropicalis Genome Array contains probes to detect transcripts from X. tropicalis, one of the most important model organisms in developmental biology. This array was designed in close collaboration with the Xenopus research community as part of the Affymetrix® GeneChip Consortia Program.
- The array is comprised of over 58,000 probe sets representing over 51,000 X. tropicalis transcripts.
- Sequences used in the design of the array were selected from the Xenopus tropicalis UniGene database (Build 30, July 2006), GenBank® mRNAs for Xenopus tropicalis (up to September 12, 2006), and predicted gene sets from both the DOE Joint Genome Institute (Xentr4 transcripts, file creation date August 17, 2005, download date May 25, 2006) and Ensembl (release 40, download date May 2006).
For research use only. Not for use in diagnostic procedures.
Library Files
Xenopus tropicalis Genome Array (zip, 31 MB)
Manuals
HT 3' IVT Express Kit (pdf 5.93 MB)
3' IVT Express Kit User Manual (pdf, 1.6 MB)
Probe Set Data in MAGE-ML Format
Package Inserts
Xenopus tropicalis Genome Array (pdf, 151 KB)
Protocol, Long
Other
NetAffx Annotation Files
X_tropicalis Annotations, CSV format, Release 30 (9 MB 11/15/09)
X_tropicalis Annotations, MAGE-ML XML Format, Release 30 (52 MB 11/15/09)
X_tropicalis BLASTP annotations, CSV Format, Release 30 (3 KB 11/16/09)
Sequence Files
X_tropicalis Consensus Sequences FASTA Format (26 MB 01/09/07)
X_tropicalis Control Sequences FASTA Format (60 KB 01/09/07)
X_tropicalis Probe Sequences, FASTA format (12 MB 01/09/07)
X_tropicalis Probe Sequences, tabular format (11 MB 01/09/07)
X_tropicalis Target Sequences FASTA Format (11 MB 01/09/07)
Archived NetAffx Annotation Files
X_tropicalis Annotations, CSV format, Release 22 (3 MB 05/31/07)
X_tropicalis Annotations, MAGE-ML XML Format, Release 22 (44 MB 06/15/07)
X_tropicalis Annotations, CSV format, Release 23 (8 MB 10/02/07)
X_tropicalis Annotations, MAGE-ML XML Format, Release 23 (51 MB 10/02/07)
X_tropicalis Annotations, CSV format, Release 24 (9 MB 11/06/07)
X_tropicalis Annotations, MAGE-ML XML Format, Release 24 (52 MB 11/06/07)
X_tropicalis BLASTP annotations, CSV Format, Release 24 (78 KB 11/06/07)
X_tropicalis Annotations, CSV format, Release 25 (9 MB 03/18/08)
X_tropicalis Annotations, MAGE-ML XML Format, Release 25 (51 MB 03/18/08)
X_tropicalis BLASTP annotations, CSV Format, Release 25 (14 KB 03/18/08)
X_tropicalis Annotations, CSV format, Release 26 (9 MB 07/08/08)
X_tropicalis Annotations, MAGE-ML XML Format, Release 26 (52 MB 07/08/08)
X_tropicalis BLASTP annotations, CSV Format, Release 26 (6 KB 07/08/08)
X_tropicalis Annotations, CSV format, Release 27 (9 MB 11/30/08)
X_tropicalis Annotations, MAGE-ML XML Format, Release 27 (55 MB 11/24/08)
X_tropicalis BLASTP annotations, CSV Format, Release 27 (2 MB 11/24/08)
X_tropicalis Annotations, CSV format, Release 28 (9 MB 03/12/09)
X_tropicalis Annotations, MAGE-ML XML Format, Release 28 (51 MB 03/12/09)
X_tropicalis BLASTP annotations, CSV Format, Release 28 (22 KB 03/04/09)
X_tropicalis Annotations, CSV format, Release 29 (9 MB 07/01/09)
X_tropicalis Annotations, MAGE-ML XML Format, Release 29 (51 MB 07/01/09)
X_tropicalis BLASTP annotations, CSV Format, Release 29 (3 KB 07/01/09)
Required Products